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ONTOLOGY REPORT - ANNOTATIONS

Term:primary alcohol metabolic process
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Accession:GO:0034308 term browser browse the term
Definition:The chemical reactions and pathways involving primary alcohols. A primary alcohol is any alcohol in which a hydroxy group, -OH, is attached to a saturated carbon atom which has either three hydrogen atoms attached to it or only one other carbon atom and two hydrogen atoms attached to it.
Synonyms:exact_synonym: monohydric alcohol metabolic process;   primary alcohol metabolism


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aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in IMP
IEA
ISO 		PMID:19342457
GO_REF:0000107
(PMID:19342457) 		Ensembl
RGD		 PMID:19342457 PMID:19342457 GO_REF:0000107, RGD:4891166 NCBI chr10:14,894,630...14,952,317
Ensembl chr10:14,390,113...14,448,376 		JBrowse link
G Cyp11b1 cytochrome P450, family 11, subfamily b, polypeptide 1 involved_in IMP
IBA 		PMID:19342457
GO_REF:0000033 		GO_Central PMID:19342457 GO_REF:0000033, RGD:4891166 NCBI chr 7:106,772,597...106,780,536
Ensembl chr 7:106,718,274...106,779,278 		JBrowse link
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 acts_upstream_of_or_within
involved_in 		IDA
IEA
IBA
ISO 		GO_REF:0000107
GO_REF:0000033
(PMID:19342457), (PMID:2256920) 		Ensembl
GO_Central
RGD		 PMID:2256920 PMID:19342457 PMID:11832364 GO_REF:0000033 GO_REF:0000107, RGD:727991 NCBI chr 7:108,719,349...108,726,024
Ensembl chr 7:106,838,590...106,845,004 		JBrowse link
G Cyp11b3 cytochrome P450, family 11, subfamily b, polypeptide 3 involved_in
acts_upstream_of_or_within 		ISO
IEA 		(PMID:1741400), (PMID:19342457), (PMID:2256920), (PMID:23322723)
GO_REF:0000107
(PMID:1686470), (PMID:8645611) 		RGD
Ensembl		 PMID:1686470 PMID:1741400 PMID:2256920 PMID:8645611 PMID:19342457 More... GO_REF:0000107 NCBI chr 7:108,689,319...108,694,808
Ensembl chr 7:106,808,559...106,814,048 		JBrowse link
aldosterone metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ednrb endothelin receptor type B involved_in ISO
IEA 		MGI:3693642 (PMID:16868309)
GO_REF:0000107 		RGD
Ensembl		 PMID:16868309 GO_REF:0000107 NCBI chr15:87,055,490...87,086,765
Ensembl chr15:80,643,043...80,672,115 		JBrowse link
G Scnn1b sodium channel epithelial 1 subunit beta acts_upstream_of_or_within ISO (PMID:28567665) RGD PMID:28567665 NCBI chr 1:185,861,326...185,915,717
Ensembl chr 1:176,430,103...176,484,451 		JBrowse link
cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in IMP
IEA
ISO 		PMID:19342457
GO_REF:0000107
(PMID:19342457) 		Ensembl
RGD		 PMID:19342457 PMID:19342457 GO_REF:0000107, RGD:4891166 NCBI chr10:14,894,630...14,952,317
Ensembl chr10:14,390,113...14,448,376 		JBrowse link
G Cyp11b1 cytochrome P450, family 11, subfamily b, polypeptide 1 involved_in IMP PMID:19342457 UniProt PMID:19342457 RGD:4891166 NCBI chr 7:106,772,597...106,780,536
Ensembl chr 7:106,718,274...106,779,278 		JBrowse link
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 involved_in ISO (PMID:19342457), (PMID:2022736), (PMID:8506298) RGD PMID:2022736 PMID:8506298 PMID:19342457 NCBI chr 7:108,719,349...108,726,024
Ensembl chr 7:106,838,590...106,845,004 		JBrowse link
G Cyp11b3 cytochrome P450, family 11, subfamily b, polypeptide 3 NOT|involved_in ISO (PMID:9703385)
(PMID:19342457) 		RGD PMID:9703385 PMID:19342457 NCBI chr 7:108,689,319...108,694,808
Ensembl chr 7:106,808,559...106,814,048 		JBrowse link
cortisol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:67,318,665...67,330,196
Ensembl chr 8:58,404,669...58,434,338 		JBrowse link
G Cyp11b1 cytochrome P450, family 11, subfamily b, polypeptide 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:106,772,597...106,780,536
Ensembl chr 7:106,718,274...106,779,278 		JBrowse link
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:108,719,349...108,726,024
Ensembl chr 7:106,838,590...106,845,004 		JBrowse link
G Hsd11b2 hydroxysteroid 11-beta dehydrogenase 2 involved_in ISO
IEA 		(PMID:8538347)
GO_REF:0000107 		RGD
Ensembl		 PMID:8538347 GO_REF:0000107 NCBI chr19:50,307,569...50,312,812
Ensembl chr19:33,397,656...33,402,899 		JBrowse link
doxorubicin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1a1 aldo-keto reductase family 1 member A1 involved_in ISO
IEA 		(PMID:18276838)
GO_REF:0000107 		RGD
Ensembl		 PMID:18276838 GO_REF:0000107 NCBI chr 5:135,329,605...135,367,037
Ensembl chr 5:130,092,732...130,113,674 		JBrowse link
G Akr1b1 aldo-keto reductase family 1 member B1 involved_in ISO (PMID:20837989) RGD PMID:20837989 NCBI chr 4:63,899,222...63,913,315
Ensembl chr 4:62,932,031...62,946,157 		JBrowse link
G Akr1b10 aldo-keto reductase family 1 member B10 involved_in ISO (PMID:20837989) RGD PMID:20837989 NCBI chr 4:64,005,632...64,027,860
Ensembl chr 4:63,040,169...63,053,852 		JBrowse link
G Akr1c1 aldo-keto reductase family 1, member C1 involved_in ISO
IBA 		(PMID:20837989)
GO_REF:0000033 		RGD
GO_Central		 PMID:20837989 GO_REF:0000033 NCBI chr17:70,720,397...70,747,285
Ensembl chr17:65,810,475...65,837,326 		JBrowse link
G Akr1c12 aldo-keto reductase family 1, member C12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:66,045,376...66,061,496
Ensembl chr17:66,045,378...66,108,329 		JBrowse link
G Akr1c12l1 aldo-keto reductase family 1, member C12-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:65,937,834...65,948,344
Ensembl chr17:65,937,814...65,997,595
Ensembl chr17:65,937,814...65,997,595 		JBrowse link
G Akr1c13 aldo-keto reductase family 1, member C13 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:65,964,186...65,997,598
Ensembl chr17:65,964,975...65,997,591 		JBrowse link
G Akr1c14 aldo-keto reductase family 1, member C14 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:66,156,286...66,173,277
Ensembl chr17:66,156,288...66,173,277 		JBrowse link
G Akr1c19 aldo-keto reductase family 1, member C19 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:66,001,358...66,027,226
Ensembl chr17:66,004,002...66,025,047 		JBrowse link
G Akr1c2 aldo-keto reductase family 1, member C2 involved_in ISO
IBA 		(PMID:20837989)
GO_REF:0000033 		RGD
GO_Central		 PMID:20837989 GO_REF:0000033 NCBI chr17:65,759,778...65,808,013
Ensembl chr17:65,759,788...65,775,764 		JBrowse link
G Akr1c3 aldo-keto reductase family 1, member C3 involved_in ISO
IBA 		(PMID:20837989)
GO_REF:0000033 		RGD
GO_Central		 PMID:20837989 GO_REF:0000033 NCBI chr17:71,020,884...71,037,779
Ensembl chr17:66,110,963...66,127,873 		JBrowse link
G Akr1c3l1 aldo-keto reductase family 1 member C3-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:65,847,580...65,881,488
Ensembl chr17:65,835,634...65,881,488 		JBrowse link
G Akr7a2 aldo-keto reductase family 7, member A2 involved_in ISO (PMID:20837989) RGD PMID:20837989 NCBI chr 5:151,552,375...151,560,914
Ensembl chr 5:151,552,343...151,560,909 		JBrowse link
G Cbr4 carbonyl reductase 4 involved_in ISO
IEA 		(PMID:20837989)
GO_REF:0000107 		RGD
Ensembl		 PMID:20837989 GO_REF:0000107 NCBI chr16:28,629,928...28,684,230
Ensembl chr16:28,617,224...28,645,712 		JBrowse link
G ENSRNOG00000063788 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr17:65,937,814...65,948,421 JBrowse link
ethanol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh1c alcohol dehydrogenase 1C (class I), gamma polypeptide acts_upstream_of_or_within ISO
IEA 		MGI:2180100 (PMID:10358022), (PMID:518534)
GO_REF:0000107 		RGD
Ensembl		 PMID:518534 PMID:10358022 GO_REF:0000107 NCBI chr 2:226,797,303...226,808,892
Ensembl chr 2:226,797,303...226,808,892 		JBrowse link
G Adh5 alcohol dehydrogenase 5 (class III), chi polypeptide IDA RGD PMID:18207224 RGD:5129089 NCBI chr 2:229,648,557...229,660,964
Ensembl chr 2:226,947,466...226,987,591 		JBrowse link
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide acts_upstream_of_or_within ISO
IEA 		MGI:2180102 (PMID:10358022)
GO_REF:0000107 		RGD
Ensembl		 PMID:10358022 GO_REF:0000107 NCBI chr 2:229,422,125...229,436,584
Ensembl chr 2:226,741,788...226,763,182 		JBrowse link
G Aldh1a7 aldehyde dehydrogenase family 1, subfamily A7 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:227,627,977...227,667,877
Ensembl chr 1:218,201,472...218,248,906 		JBrowse link
G Aldh1b1 aldehyde dehydrogenase 1 family, member B1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:64,859,000...64,864,008
Ensembl chr 5:60,063,225...60,068,378 		JBrowse link
G Aldh2 aldehyde dehydrogenase 2 family member involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr12:40,610,244...40,643,220
Ensembl chr12:34,901,219...34,982,521 		JBrowse link
G Aldh3b1 aldehyde dehydrogenase 3 family, member B1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:201,145,309...201,162,675
Ensembl chr 1:201,145,309...201,163,921 		JBrowse link
G Sult1a1 sulfotransferase family 1A member 1 involved_in ISO (PMID:23207770) RGD PMID:23207770 NCBI chr 1:190,702,592...190,706,112
Ensembl chr 1:181,272,023...181,275,562 		JBrowse link
G Sult1b1 sulfotransferase family 1B member 1 involved_in ISO (PMID:23207770) RGD PMID:23207770 NCBI chr14:20,492,763...20,505,491
Ensembl chr14:20,492,708...20,505,483 		JBrowse link
G Sult1e1 sulfotransferase family 1E member 1 involved_in ISO
IEA 		(PMID:23207770)
GO_REF:0000107 		RGD
Ensembl		 PMID:23207770 GO_REF:0000107 NCBI chr14:20,700,444...20,718,719
Ensembl chr14:20,422,324...20,439,275 		JBrowse link
G Sult2a1 sulfotransferase family 2A member 1 involved_in ISO (PMID:23207770) RGD PMID:23207770 NCBI chr 1:84,582,011...84,639,001
Ensembl chr 1:74,911,100...75,508,134 		JBrowse link
ethanol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh4 alcohol dehydrogenase 4 (class II), pi polypeptide acts_upstream_of_or_within ISO
IEA 		(PMID:518534)
GO_REF:0000107 		RGD
Ensembl		 PMID:518534 GO_REF:0000107 NCBI chr 2:229,622,092...229,640,120
Ensembl chr 2:226,947,466...226,987,591 		JBrowse link
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide IDA RGD PMID:10829036 RGD:631904 NCBI chr 2:229,422,125...229,436,584
Ensembl chr 2:226,741,788...226,763,182 		JBrowse link
G Aldh2 aldehyde dehydrogenase 2 family member IEP protein:altered expression, altered activity:liver (rat) RGD PMID:28688179 RGD:14981582 NCBI chr12:40,610,244...40,643,220
Ensembl chr12:34,901,219...34,982,521 		JBrowse link
ethanolamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chka choline kinase alpha IDA RGD PMID:1577786 RGD:61551 NCBI chr 1:210,506,069...210,554,753
Ensembl chr 1:201,076,860...201,125,516 		JBrowse link
G Gde1 glycerophosphodiester phosphodiesterase 1 involved_in ISS
IEA
ISO
IBA 		GO_REF:0000024
GO_REF:0000107
(PMID:18227059)
GO_REF:0000033 		UniProt
Ensembl
RGD
GO_Central		 PMID:18227059 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:173,016,984...173,032,396
Ensembl chr 1:172,954,394...173,032,429 		JBrowse link
farnesol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b10 aldo-keto reductase family 1 member B10 involved_in ISO (PMID:21187079) RGD PMID:21187079 NCBI chr 4:64,005,632...64,027,860
Ensembl chr 4:63,040,169...63,053,852 		JBrowse link
G Akr1c3 aldo-keto reductase family 1, member C3 involved_in ISO (PMID:21187079) RGD PMID:21187079 NCBI chr17:71,020,884...71,037,779
Ensembl chr17:66,110,963...66,127,873 		JBrowse link
glycolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENSRNOG00000069013 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr16:39,727,789...39,729,234 JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO
IBA
ISS 		(PMID:22523093)
GO_REF:0000033
GO_REF:0000024 		RGD
GO_Central
ParkinsonsUK-UCL		 PMID:22523093 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:166,636,551...166,659,825
Ensembl chr 5:161,353,719...161,376,970 		JBrowse link
glycolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hao1 hydroxyacid oxidase 1 involved_in ISO
IEA 		(PMID:18215067)
GO_REF:0000107 		RGD
Ensembl		 PMID:18215067 GO_REF:0000107 NCBI chr 3:121,757,400...121,828,721
Ensembl chr 3:121,771,836...121,828,721 		JBrowse link
N-acylethanolamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd4 abhydrolase domain containing 4, N-acyl phospholipase B acts_upstream_of_or_within ISO (PMID:16818490) RGD PMID:16818490 NCBI chr15:27,697,384...27,716,013
Ensembl chr15:27,704,113...27,716,966 		JBrowse link
G Gde1 glycerophosphodiester phosphodiesterase 1 involved_in
acts_upstream_of_or_within 		ISS
IEA
ISO
IBA 		GO_REF:0000024
GO_REF:0000107
(PMID:21801852)
(PMID:25596343)
GO_REF:0000033 		UniProt
Ensembl
RGD
GO_Central		 PMID:21801852 PMID:25596343 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:173,016,984...173,032,396
Ensembl chr 1:172,954,394...173,032,429 		JBrowse link
G Gdpd1 glycerophosphodiester phosphodiesterase domain containing 1 involved_in
acts_upstream_of_or_within 		ISS
IEA
ISO
IBA 		GO_REF:0000024
GO_REF:0000107
(PMID:27637550)
(PMID:25596343)
GO_REF:0000033 		UniProt
Ensembl
RGD
GO_Central		 PMID:25596343 PMID:27637550 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:71,840,497...71,883,936
Ensembl chr10:71,840,497...71,883,850 		JBrowse link
G Gdpd3 glycerophosphodiester phosphodiesterase domain containing 3 involved_in ISO (PMID:27637550) RGD PMID:27637550 NCBI chr 1:181,373,505...181,383,063
Ensembl chr 1:181,366,626...181,383,063 		JBrowse link
G Naaa N-acylethanolamine acid amidase involved_in IDA
IEA
ISS
ISO 		PMID:22860206
GO_REF:0000107
GO_REF:0000024
(PMID:15655246), (PMID:30301806) 		Ensembl
UniProt
RGD		 PMID:15655246 PMID:30301806 PMID:22860206 GO_REF:0000024 GO_REF:0000107, RGD:39458030 NCBI chr14:15,777,306...15,796,411
Ensembl chr14:15,777,306...15,796,410 		JBrowse link
G Napepld N-acyl phosphatidylethanolamine phospholipase D involved_in
acts_upstream_of_or_within 		IBA
ISO 		GO_REF:0000033
MGI:3695401 (PMID:14634025), (PMID:16818490) 		GO_Central
RGD		 PMID:14634025 PMID:16818490 GO_REF:0000033 NCBI chr 4:13,360,532...13,398,815
Ensembl chr 4:13,361,006...13,398,748 		JBrowse link
negative regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in IEA
ISO 		GO_REF:0000107
(PMID:19584291) 		Ensembl
RGD		 PMID:19584291 GO_REF:0000107 NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in ISO (PMID:19584291) RGD PMID:19584291 NCBI chr 8:85,397,629...85,520,374
Ensembl chr 8:76,517,164...76,639,925 		JBrowse link
G Dkk3 dickkopf WNT signaling pathway inhibitor 3 involved_in ISO (PMID:16981135) RGD PMID:16981135 NCBI chr 1:166,237,969...166,281,271
Ensembl chr 1:166,238,238...166,280,590 		JBrowse link
G Rest RE1-silencing transcription factor involved_in ISO
IEA
IMP 		(PMID:19342457)
GO_REF:0000107 		RGD
Ensembl		 PMID:19342457 PMID:19342457 GO_REF:0000107, RGD:4891166 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354 		JBrowse link
negative regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in ISO
IEA 		(PMID:19584291)
GO_REF:0000107 		RGD
Ensembl		 PMID:19584291 GO_REF:0000107 NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in ISO (PMID:19584291) RGD PMID:19584291 NCBI chr 8:85,397,629...85,520,374
Ensembl chr 8:76,517,164...76,639,925 		JBrowse link
G Dkk3 dickkopf WNT signaling pathway inhibitor 3 involved_in ISO (PMID:16981135) RGD PMID:16981135 NCBI chr 1:166,237,969...166,281,271
Ensembl chr 1:166,238,238...166,280,590 		JBrowse link
G Rest RE1-silencing transcription factor involved_in ISO
IMP
IEA 		(PMID:19342457)
GO_REF:0000107 		RGD
Ensembl		 PMID:19342457 PMID:19342457 GO_REF:0000107, RGD:4891166 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354 		JBrowse link
phytol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh3a2 aldehyde dehydrogenase 3 family, member A2 involved_in ISO
IEA 		(PMID:15110319)
GO_REF:0000107 		RGD
Ensembl		 PMID:15110319 GO_REF:0000107 NCBI chr10:46,427,789...46,448,449
Ensembl chr10:45,908,524...45,949,281 		JBrowse link
G Pecr peroxisomal trans-2-enoyl-CoA reductase involved_in ISO
IBA
IEA 		(PMID:16546181)
GO_REF:0000033
GO_REF:0000107 		RGD
GO_Central
Ensembl		 PMID:16546181 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:81,347,170...81,375,809
Ensembl chr 9:73,897,880...73,926,511 		JBrowse link
positive regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp6 bone morphogenetic protein 6 involved_in ISO
IEA 		(PMID:16527843)
GO_REF:0000107 		RGD
Ensembl		 PMID:16527843 GO_REF:0000107 NCBI chr17:26,523,704...26,785,558
Ensembl chr17:26,318,569...26,470,365 		JBrowse link
G Dab2 DAB adaptor protein 2 IDA RGD PMID:17303656 RGD:7243836 NCBI chr 2:57,241,947...57,294,893
Ensembl chr 2:55,514,700...55,567,476 		JBrowse link
G Wnt4 Wnt family member 4 involved_in ISO
IEA 		(PMID:16981135)
GO_REF:0000107 		RGD
Ensembl		 PMID:16981135 GO_REF:0000107 NCBI chr 5:154,797,245...154,818,565
Ensembl chr 5:149,514,018...149,532,859 		JBrowse link
positive regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt4 Wnt family member 4 involved_in ISO
IEA 		(PMID:16981135)
GO_REF:0000107 		RGD
Ensembl		 PMID:16981135 GO_REF:0000107 NCBI chr 5:154,797,245...154,818,565
Ensembl chr 5:149,514,018...149,532,859 		JBrowse link
regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clcn2 chloride voltage-gated channel 2 involved_in ISO
IEA
ISS 		(PMID:29403011)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:29403011 GO_REF:0000024 GO_REF:0000107 NCBI chr11:93,702,382...93,716,059
Ensembl chr11:80,198,153...80,211,657 		JBrowse link
regulation of aldosterone metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO MGI:3050114 (PMID:17122062) RGD PMID:17122062 NCBI chr15:302,480...1,007,675
Ensembl chr15:302,214...1,001,198 		JBrowse link
regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dgkq diacylglycerol kinase, theta involved_in ISO (PMID:24369117) RGD PMID:24369117 NCBI chr14:1,059,125...1,073,131
Ensembl chr14:1,059,170...1,073,131 		JBrowse link
G H6pd hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) involved_in ISO
IEA 		(PMID:18628520), (PMID:23132696)
GO_REF:0000107
(PMID:16356929) 		RGD
Ensembl		 PMID:16356929 PMID:18628520 PMID:23132696 GO_REF:0000107 NCBI chr 5:160,434,499...160,470,203
Ensembl chr 5:160,438,697...160,470,171 		JBrowse link
retinol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh1-ps1 alcohol dehydrogenase 1C (class I), gamma polypeptide, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:226,862,836...226,881,171
Ensembl chr 2:226,862,725...226,881,162 		JBrowse link
G Adh1c alcohol dehydrogenase 1C (class I), gamma polypeptide involved_in
acts_upstream_of_or_within 		IBA
ISO
IEA 		GO_REF:0000033
MGI:2180099|MGI:2180100|MGI:97876 (PMID:10358022), (PMID:12851412), (PMID:15193143)
GO_REF:0000107 		GO_Central
RGD
Ensembl		 PMID:10358022 PMID:12851412 PMID:15193143 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:226,797,303...226,808,892
Ensembl chr 2:226,797,303...226,808,892 		JBrowse link
G Adh4 alcohol dehydrogenase 4 (class II), pi polypeptide involved_in ISO
IEA
ISS 		(PMID:16787387), (PMID:17279314)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:16787387 PMID:17279314 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:229,622,092...229,640,120
Ensembl chr 2:226,947,466...226,987,591 		JBrowse link
G Adh6 alcohol dehydrogenase 6 (class V) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:229,576,612...229,608,359
Ensembl chr 2:226,903,250...226,934,534 		JBrowse link
G Adh6a alcohol dehydrogenase 6A (class V) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:226,823,775...226,846,005
Ensembl chr 2:226,823,730...226,846,003 		JBrowse link
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide acts_upstream_of_or_within
involved_in 		IDA
IEA
ISO
IBA 		GO_REF:0000107
MGI:2180102 (PMID:10358022), (PMID:10402668)
GO_REF:0000033 		Ensembl
RGD
GO_Central		 PMID:10358022 PMID:10402668 PMID:10829036 GO_REF:0000033 GO_REF:0000107, RGD:631904 NCBI chr 2:229,422,125...229,436,584
Ensembl chr 2:226,741,788...226,763,182 		JBrowse link
G Akr1b1 aldo-keto reductase family 1 member B1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:63,899,222...63,913,315
Ensembl chr 4:62,932,031...62,946,157 		JBrowse link
G Akr1b10 aldo-keto reductase family 1 member B10 IDA RGD PMID:20709016 RGD:6903952 NCBI chr 4:64,005,632...64,027,860
Ensembl chr 4:63,040,169...63,053,852 		JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 involved_in
acts_upstream_of_or_within 		IEA
ISO 		GO_REF:0000041
MGI:2667220 (PMID:12851412)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:12851412 GO_REF:0000041 GO_REF:0000107 NCBI chr 1:227,426,939...227,579,497
Ensembl chr 1:218,042,127...218,152,961 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436 		JBrowse link
G Awat2 acyl-CoA wax alcohol acyltransferase 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:65,481,676...65,490,562
Ensembl chr  X:65,481,929...65,527,625 		JBrowse link
G Bco1 beta-carotene oxygenase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr19:45,149,250...45,186,102
Ensembl chr19:45,149,265...45,186,101 		JBrowse link
G Cel carboxyl ester lipase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:11,883,532...11,891,035
Ensembl chr 3:11,883,532...11,891,035 		JBrowse link
G Ces1d carboxylesterase 1D involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:30,046,494...30,085,039
Ensembl chr19:13,796,623...13,912,035 		JBrowse link
G Ces1dl1 carboxylesterase 1D like 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:22,560,685...22,592,355
Ensembl chr19:22,560,770...22,592,351 		JBrowse link
G Ces1e carboxylesterase 1E involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:13,833,154...13,869,627
Ensembl chr19:13,796,623...13,912,035 		JBrowse link
G Ces1f carboxylesterase 1F involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:13,796,623...13,822,113
Ensembl chr19:13,796,623...13,912,035 		JBrowse link
G Ces2a carboxylesterase 2A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:129,428...136,480
Ensembl chr19:129,428...136,480 		JBrowse link
G Ces2c carboxylesterase 2C involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:260,391,190...260,398,757
Ensembl chr 1:260,388,902...260,398,790 		JBrowse link
G Ces2e carboxylesterase 2E involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:157,447...172,822
Ensembl chr19:157,407...172,856 		JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
GO_REF:0000041
(PMID:10681376) 		UniProt
Ensembl
RGD		 PMID:10681376 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr 8:66,991,940...66,998,014
Ensembl chr 8:58,096,077...58,102,125 		JBrowse link
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 involved_in IEA
ISS
ISO 		GO_REF:0000041
GO_REF:0000107
GO_REF:0000024
(PMID:10681376) 		UniProt
Ensembl
RGD		 PMID:10681376 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr 8:66,971,261...66,978,149
Ensembl chr 8:58,075,367...58,082,312 		JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:15258110)
GO_REF:0000041
(PMID:10681376), (PMID:15258110)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:10681376 PMID:15258110 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr 6:21,093,927...21,103,091
Ensembl chr 6:15,342,344...15,350,917 		JBrowse link
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 involved_in ISO (PMID:10681376) RGD PMID:10681376 NCBI chr 7:115,762,662...115,771,832
Ensembl chr 7:113,881,618...113,891,759 		JBrowse link
G Cyp2j4 cytochrome P450, family 2, subfamily j, polypeptide 4 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:116,295,691...116,323,219
Ensembl chr 5:111,178,703...111,244,794 		JBrowse link
G Cyp3a2 cytochrome P450, family 3, subfamily a, polypeptide 2 involved_in ISO (PMID:10681376) RGD PMID:10681376 NCBI chr12:14,321,771...14,343,886
Ensembl chr12:9,015,383...9,285,008 		JBrowse link
G Dgat1 diacylglycerol O-acyltransferase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:110,104,514...110,119,091
Ensembl chr 7:108,218,524...108,234,299 		JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:153,454,078...153,484,432
Ensembl chr 1:153,454,080...153,484,428 		JBrowse link
G Dhrs3 dehydrogenase/reductase 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:162,031,853...162,065,655
Ensembl chr 5:156,747,962...156,782,417 		JBrowse link
G Dhrs4 dehydrogenase/reductase 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:28,966,544...28,978,135
Ensembl chr15:28,966,553...28,978,127 		JBrowse link
G Dhrs7 dehydrogenase/reductase 7 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:91,332,259...91,347,856
Ensembl chr 6:91,251,323...91,347,892 		JBrowse link
G Hsd17b6 hydroxysteroid (17-beta) dehydrogenase 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:422,466...442,008
Ensembl chr 7:422,480...442,425 		JBrowse link
G Lipe lipase E, hormone sensitive type involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:90,093,433...90,112,117
Ensembl chr 1:80,965,627...80,984,310 		JBrowse link
G Lrat lecithin retinol acyltransferase involved_in
acts_upstream_of_or_within 		IDA
IEA
ISO
IBA 		GO_REF:0000107
GO_REF:0000002
(PMID:28758396)
MGI:3038935|MGI:97879 (PMID:18093970)
GO_REF:0000033
(PMID:10819989)
GO_REF:0000041 		Ensembl
InterPro
RGD
GO_Central
UniProt		 PMID:10819989 PMID:18093970 PMID:28758396 PMID:2253789 PMID:14642897 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107, RGD:1599829, RGD:6484737, RGD:1599832, RGD:1599831 NCBI chr 2:168,264,093...168,273,155
Ensembl chr 2:168,266,877...168,273,619 		JBrowse link
G Plb1 phospholipase B1 IDA RGD PMID:8117729 RGD:6903951 NCBI chr 6:29,807,127...29,945,607
Ensembl chr 6:24,089,214...24,210,117 		JBrowse link
G Pnlip pancreatic lipase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:257,774,012...257,811,656
Ensembl chr 1:257,798,581...257,811,654 		JBrowse link
G Pnpla2 patatin-like phospholipase domain containing 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:205,982,279...205,987,361
Ensembl chr 1:196,552,723...196,557,805 		JBrowse link
G Pnpla4 patatin like phospholipase domain containing 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:42,313,554...42,318,451
Ensembl chr  X:42,305,373...42,318,552 		JBrowse link
G Rbp1 retinol binding protein 1 acts_upstream_of_or_within IDA
ISO 		MGI:2181412|MGI:87921 (PMID:15193143), (PMID:15765518) RGD PMID:15193143 PMID:15765518 PMID:14642897 RGD:6484737 NCBI chr 8:99,025,218...99,046,740
Ensembl chr 8:99,025,206...99,046,743 		JBrowse link
G Rbp2 retinol binding protein 2 TAS RGD PMID:3029082 RGD:729693 NCBI chr 8:99,079,293...99,104,489
Ensembl chr 8:99,079,104...99,104,473 		JBrowse link
G Rbp4 retinol binding protein 4 involved_in
acts_upstream_of_or_within 		ISO
IEA 		(PMID:10232633)
MGI:1891259 (PMID:18093970)
GO_REF:0000107 		RGD
Ensembl		 PMID:10232633 PMID:18093970 GO_REF:0000107 NCBI chr 1:245,306,349...245,313,551
Ensembl chr 1:235,893,917...235,901,399 		JBrowse link
G Rdh10 retinol dehydrogenase 10 involved_in ISO
IEA 		(PMID:19458327)
GO_REF:0000107
GO_REF:0000041 		RGD
Ensembl
UniProt		 PMID:19458327 GO_REF:0000041 GO_REF:0000107 NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572 		JBrowse link
G Rdh11 retinol dehydrogenase 11 involved_in ISO (PMID:29567832) RGD PMID:29567832 NCBI chr 6:97,979,377...97,995,252
Ensembl chr 6:97,979,378...97,995,252 		JBrowse link
G Rdh12 retinol dehydrogenase 12 involved_in ISO
IEA 		(PMID:12226107)
GO_REF:0000107
(PMID:22621924) 		RGD
Ensembl		 PMID:12226107 PMID:22621924 GO_REF:0000107 NCBI chr 6:98,015,465...98,028,388
Ensembl chr 6:98,015,465...98,028,388 		JBrowse link
G Rdh13 retinol dehydrogenase 13 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:69,373,014...69,401,454
Ensembl chr 1:69,373,113...69,400,908 		JBrowse link
G Rdh14 retinol dehydrogenase 14 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:25533474)
GO_REF:0000107
(PMID:12226107) 		RGD
Ensembl		 PMID:12226107 PMID:25533474 GO_REF:0000107 NCBI chr 6:33,156,569...33,161,712
Ensembl chr 6:33,156,569...33,161,712 		JBrowse link
G Rdh16 retinol dehydrogenase 16 involved_in IDA
IBA
IEA 		GO_REF:0000033
GO_REF:0000041 		GO_Central
UniProt
RGD		 PMID:7499345 GO_REF:0000033 GO_REF:0000041, RGD:1299624 NCBI chr 7:63,616,711...63,625,053
Ensembl chr 7:63,597,536...63,624,124 		JBrowse link
G Rdh7 retinol dehydrogenase 7 involved_in IEA
IBA 		GO_REF:0000041
GO_REF:0000033 		UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 NCBI chr 7:63,676,016...63,689,375
Ensembl chr 7:63,675,579...63,689,392 		JBrowse link
G Rdh8 retinol dehydrogenase 8 involved_in
acts_upstream_of_or_within 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:15755727) 		GO_Central
Ensembl
RGD		 PMID:15755727 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:19,353,191...19,360,462
Ensembl chr 8:19,353,191...19,360,462 		JBrowse link
G Retsat retinol saturase involved_in ISS
IBA
ISO 		PMID:15358783
GO_REF:0000033
(PMID:15358783) 		GO_Central
RGD		 PMID:15358783 PMID:15358783 GO_REF:0000033, RGD:8553455 NCBI chr 4:104,653,306...104,662,069
Ensembl chr 4:104,653,155...104,668,310 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 IDA RGD PMID:3603006 RGD:9585656 NCBI chr 2:251,425,228...251,457,209
Ensembl chr 2:248,766,612...248,798,403 		JBrowse link
G Sdr16c5 short chain dehydrogenase/reductase family 16C, member 5 involved_in ISO
IEA
IBA 		(PMID:18926804), (PMID:19102727)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:18926804 PMID:19102727 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:17,018,813...17,043,974
Ensembl chr 5:17,018,813...17,040,970 		JBrowse link
G Sdr9c7 short chain dehydrogenase/reductase family 9C, member 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:63,703,788...63,720,325
Ensembl chr 7:63,707,071...63,721,480 		JBrowse link
thiamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp3 acid phosphatase 3 involved_in IEA
ISO 		GO_REF:0000107
(PMID:18940592) 		Ensembl
RGD		 PMID:18940592 GO_REF:0000107 NCBI chr 8:104,905,570...104,956,146
Ensembl chr 8:104,905,586...104,954,236 		JBrowse link
G Thtpa thiamine triphosphatase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:28,567,619...28,571,580
Ensembl chr15:28,567,323...28,571,580 		JBrowse link
G Tpk1 thiamin pyrophosphokinase 1 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:10567383)
GO_REF:0000002
GO_REF:0000107 		RGD
InterPro
Ensembl		 PMID:10567383 GO_REF:0000002 GO_REF:0000107 NCBI chr 4:72,170,134...72,557,707
Ensembl chr 4:72,170,134...72,557,694 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      metabolic process 12158
        small molecule metabolic process 1944
          alcohol metabolic process 401
            primary alcohol metabolic process 110
              (+)-lariciresinol metabolic process + 0
              1-butanol metabolic process + 0
              6-sulfoquinovose(1-) catabolic process to glycerone phosphate and 3-sulfolactaldehyde 0
              N-acylethanolamine metabolic process 6
              aldosterone metabolic process + 15
              aromatic primary alcohol metabolic process + 0
              chanoclavine-I metabolic process 0
              chrysobactin metabolic process + 0
              cortisol metabolic process + 13
              doxorubicin metabolic process 15
              ethanol metabolic process + 12
              ethanolamine metabolic process + 2
              farnesol metabolic process + 2
              geraniol metabolic process + 0
              glycerol to glycerone phosphate metabolic process 0
              glycolate metabolic process + 3
              isobutanol metabolic process + 0
              kojic acid metabolic process + 0
              methanol metabolic process + 0
              octanol metabolic process + 0
              phytol metabolic process + 2
              primary alcohol biosynthetic process + 16
              primary alcohol catabolic process + 14
              retinol metabolic process 54
              thiamine metabolic process + 3
paths to the root