Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of amide metabolic process
go back to main search page
Accession:GO:0034250 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amides.
Synonyms:exact_synonym: positive regulation of amide metabolism;   positive regulation of cellular amide metabolic process


GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
positive regulation of amide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nsmaf neutral sphingomyelinase activation associated factor involved_in ISO (MGI:3040579|PMID:14985352) MGI PMID:14985352 MGI:3040579 NCBI chrNW_004955454:17,113,817...17,162,900
Ensembl chrNW_004955454:17,114,391...17,162,899
JBrowse link
G Tnf tumor necrosis factor involved_in ISO (MGI:1337865|PMID:10411298), (MGI:3040579|PMID:14985352) MGI PMID:10411298 PMID:14985352 MGI:1337865 MGI:3040579 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A involved_in ISO (MGI:3040579|PMID:14985352) MGI PMID:14985352 MGI:3040579 NCBI chrNW_004955413:3,982,670...3,996,320
Ensembl chrNW_004955413:3,981,400...3,996,021
JBrowse link
positive regulation of amyloid-beta formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of
involved_in
ISO (PMID:22086926) ARUK-UCL PMID:22086926 RGD:14697726 NCBI chrNW_004955513:5,035,879...5,051,140
Ensembl chrNW_004955513:5,033,771...5,051,200
JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO (PMID:17293612) ARUK-UCL PMID:17293612 NCBI chrNW_004955407:39,410,262...39,459,383
Ensembl chrNW_004955407:39,410,262...39,459,383
JBrowse link
G Apoe apolipoprotein E involved_in ISO (PMID:24154541), (PMID:24259049) Alzheimers_University_of_Toronto PMID:24154541 PMID:24259049 NCBI chrNW_004955555:1,998,170...2,002,003
Ensembl chrNW_004955555:1,999,711...2,001,888
JBrowse link
G Casp3 caspase 3 involved_in ISO PMID:17553422
(PMID:17553422)
UniProt PMID:17553422 RGD:13825190 NCBI chrNW_004955403:24,315,712...24,326,271 JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit involved_in ISO (MGI:4437154|PMID:20164328) ARUK-UCL PMID:20164328 MGI:4437154 NCBI chrNW_004955416:30,687,518...30,798,700
Ensembl chrNW_004955416:30,687,478...30,798,700
JBrowse link
G Clu clusterin involved_in ISO (MGI:2384259|PMID:12145324) Alzheimers_University_of_Toronto PMID:12145324 MGI:2384259 NCBI chrNW_004955403:50,160,598...50,175,876
Ensembl chrNW_004955403:50,160,598...50,175,876
JBrowse link
G Csnk1e casein kinase 1 epsilon ISO RGD PMID:17360493 RGD:10395238 NCBI chrNW_004955413:24,560,889...24,591,669
Ensembl chrNW_004955413:24,560,900...24,591,669
JBrowse link
G Efna1 ephrin A1 involved_in ISO (PMID:24217950) ARUK-UCL PMID:24217950 NCBI chrNW_004955545:1,610,929...1,617,217
Ensembl chrNW_004955545:1,610,929...1,617,460
JBrowse link
G Epha4 EPH receptor A4 involved_in ISO (PMID:24217950) ARUK-UCL PMID:24217950 NCBI chrNW_004955453:12,099,800...12,240,199
Ensembl chrNW_004955453:12,099,757...12,240,199
JBrowse link
G Gsap gamma-secretase activating protein involved_in ISO (PMID:20811458)
(MGI:4830390|PMID:20811458)
UniProt PMID:20811458 MGI:4830390 NCBI chrNW_004955410:7,740,548...7,810,563 JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha involved_in ISO (PMID:12761548) ARUK-UCL PMID:12761548 NCBI chrNW_004955555:668,641...676,351
Ensembl chrNW_004955555:667,973...676,351
JBrowse link
G Ifng interferon gamma involved_in ISO (PMID:19808651)
(MGI:3697769|PMID:17255335)
ARUK-UCL PMID:17255335 PMID:19808651 MGI:3697769 NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045
JBrowse link
G Ifngr1 interferon gamma receptor 1 involved_in ISO (MGI:3697769|PMID:17255335) ARUK-UCL PMID:17255335 MGI:3697769 NCBI chrNW_004955436:22,183,318...22,199,013 JBrowse link
G Lrrtm3 leucine rich repeat transmembrane neuronal 3 acts_upstream_of_or_within ISO (MGI:3695648|PMID:17098871)
(PMID:17098871)
MGI PMID:17098871 MGI:3695648 NCBI chrNW_004955425:19,480,944...19,657,178
Ensembl chrNW_004955425:19,480,907...19,654,804
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in ISO (PMID:24577224)
(MGI:5432454|PMID:22539346), (MGI:5560380|PMID:24577224)
Alzheimers_University_of_Toronto PMID:22539346 PMID:24577224 MGI:5432454 MGI:5560380 NCBI chrNW_004955414:6,871,220...6,970,569
Ensembl chrNW_004955414:6,871,520...6,969,208
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit acts_upstream_of ISO (MGI:6414694|PMID:21329555) ARUK-UCL PMID:21329555 MGI:6414694 NCBI chrNW_004955422:19,602,930...19,612,263
Ensembl chrNW_004955422:19,603,345...19,611,516
JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:24305806)
(MGI:6114922|PMID:24305806)
ARUK-UCL PMID:24305806 MGI:6114922 NCBI chrNW_004955487:5,856,190...5,972,408
Ensembl chrNW_004955487:5,859,204...5,972,401
JBrowse link
G Slc2a13 solute carrier family 2 member 13 involved_in ISO (PMID:26094765) ARUK-UCL PMID:26094765 NCBI chrNW_004955505:395,380...664,272
Ensembl chrNW_004955505:396,744...662,738
JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of ISO (PMID:14701757) ARUK-UCL PMID:14701757 NCBI chrNW_004955458:644,435...677,360
Ensembl chrNW_004955458:644,378...677,441
JBrowse link
G Tnf tumor necrosis factor involved_in ISO (MGI:3697769|PMID:17255335) ARUK-UCL PMID:17255335 MGI:3697769 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700
JBrowse link
positive regulation of antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (MGI:3775881|PMID:18167348) MGI PMID:18167348 MGI:3775881 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710
JBrowse link
positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (MGI:3528786|PMID:15692051) MGI PMID:15692051 MGI:3528786 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710
JBrowse link
positive regulation of cap-dependent translational initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nck1 NCK adaptor protein 1 involved_in ISO (PMID:11959995) ParkinsonsUK-UCL PMID:11959995 NCBI chrNW_004955501:1,867,956...1,963,091 JBrowse link
positive regulation of cap-independent translational initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:26593424) UniProt PMID:26593424 NCBI chrNW_004955550:2,211,270...2,227,715
Ensembl chrNW_004955550:2,211,270...2,227,715
JBrowse link
G Nck1 NCK adaptor protein 1 involved_in ISO (PMID:11959995) ParkinsonsUK-UCL PMID:11959995 NCBI chrNW_004955501:1,867,956...1,963,091 JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein F2 involved_in ISO (PMID:26458103) UniProt PMID:26458103 NCBI chrNW_004955452:7,783,398...7,815,468 JBrowse link
positive regulation of ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccn1 cellular communication network factor 1 acts_upstream_of_or_within ISO (MGI:3849354|PMID:19364818) MGI PMID:19364818 MGI:3849354 NCBI chrNW_004955423:8,416,498...8,419,029
Ensembl chrNW_004955423:8,413,725...8,419,166
JBrowse link
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in ISO (MGI:4947032|PMID:21177474) UniProt PMID:21177474 MGI:4947032 NCBI chrNW_004955506:3,151,133...3,154,613
Ensembl chrNW_004955506:3,151,133...3,154,613
JBrowse link
G Pla2g6 phospholipase A2 group VI ISO RGD PMID:18936091 RGD:6482750 NCBI chrNW_004955413:24,431,592...24,482,229
Ensembl chrNW_004955413:24,429,589...24,482,537
JBrowse link
G Prkcd protein kinase C delta involved_in ISO (PMID:19279011) BHF-UCL PMID:19279011 NCBI chrNW_004955430:3,125,066...3,151,857
Ensembl chrNW_004955430:3,124,738...3,153,274
JBrowse link
G Sirt3 sirtuin 3 involved_in ISO (MGI:5755322|PMID:26620563) UniProt PMID:26620563 MGI:5755322 NCBI chrNW_004955476:11,794,951...11,826,244
Ensembl chrNW_004955476:11,794,951...11,826,237
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 ISO RGD PMID:20096352 RGD:10041064 NCBI chrNW_004955484:8,207,686...8,298,164
Ensembl chrNW_004955484:8,272,572...8,298,144
JBrowse link
G Sphk2 sphingosine kinase 2 involved_in ISO (PMID:16118219)
(MGI:6294167|PMID:16118219)
UniProt PMID:16118219 MGI:6294167 NCBI chrNW_004955559:1,921,479...1,929,450
Ensembl chrNW_004955559:1,917,301...1,928,493
JBrowse link
G Znf750 zinc finger protein 750 acts_upstream_of_or_within ISO (MGI:7470345|PMID:37115925) MGI PMID:37115925 MGI:7470345 NCBI chrNW_004955506:352,616...360,802
Ensembl chrNW_004955506:352,552...363,003
JBrowse link
positive regulation of cytoplasmic translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csde1 cold shock domain containing E1 involved_in ISO (PMID:11051545) ComplexPortal PMID:11051545 NCBI chrNW_004955435:18,009,228...18,050,329
Ensembl chrNW_004955435:18,008,352...18,050,329
JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO (PMID:26489465) UniProt PMID:26489465 NCBI chrNW_004955448:5,634,072...5,676,272
Ensembl chrNW_004955448:5,634,072...5,676,319
JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:16680162), (PMID:21247876), (PMID:22190748)
(PMID:19029303)
UniProt
ComplexPortal
PMID:16680162 PMID:19029303 PMID:21247876 PMID:22190748 NCBI chrNW_004955406:21,697,813...21,743,551
Ensembl chrNW_004955406:21,697,813...21,745,011
JBrowse link
G Eef2 eukaryotic translation elongation factor 2 ISO RGD PMID:19625250 RGD:10401254 NCBI chrNW_004955495:4,800,103...4,807,714
Ensembl chrNW_004955495:4,799,922...4,807,252
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO (PMID:11051545) ComplexPortal PMID:11051545 NCBI chrNW_004955433:6,452,931...6,470,209
Ensembl chrNW_004955433:6,454,454...6,469,904
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (PMID:19029303) ComplexPortal PMID:19029303 NCBI chrNW_004955406:8,000,269...8,021,554
Ensembl chrNW_004955406:8,000,269...8,021,554
JBrowse link
G Igf2bp1 insulin like growth factor 2 mRNA binding protein 1 involved_in ISO (PMID:19029303) ComplexPortal PMID:19029303 NCBI chrNW_004955451:12,312,715...12,348,663
Ensembl chrNW_004955451:12,312,715...12,348,663
JBrowse link
G Lin28a lin-28 homolog A involved_in ISO (PMID:21247876) UniProt PMID:21247876 NCBI chrNW_004955452:5,793,583...5,808,662
Ensembl chrNW_004955452:5,793,583...5,808,662
JBrowse link
G Pabpc1 poly(A) binding protein cytoplasmic 1 involved_in ISO (PMID:11051545) ComplexPortal PMID:11051545 NCBI chrNW_004955417:15,872,906...15,885,246
Ensembl chrNW_004955417:15,868,934...15,885,247
JBrowse link
G Paip1 poly(A) binding protein interacting protein 1 involved_in ISO (PMID:11051545) ComplexPortal PMID:11051545 NCBI chrNW_004955446:18,801,971...18,830,816
Ensembl chrNW_004955446:18,801,578...18,831,963
JBrowse link
G Piwil2 piwi like RNA-mediated gene silencing 2 involved_in ISO (MGI:3842880|PMID:19114715) UniProt PMID:19114715 MGI:3842880 NCBI chrNW_004955403:45,737,674...45,819,478
Ensembl chrNW_004955403:45,737,674...45,819,873
JBrowse link
G Pkm pyruvate kinase M1/2 involved_in ISO (MGI:6331015|PMID:28575669) UniProt PMID:28575669 MGI:6331015 NCBI chrNW_004955450:4,907,962...4,935,179
Ensembl chrNW_004955450:4,907,788...4,936,199
JBrowse link
G Syncrip synaptotagmin binding cytoplasmic RNA interacting protein involved_in ISO (PMID:11051545), (PMID:19029303) ComplexPortal PMID:11051545 PMID:19029303 NCBI chrNW_004955411:13,068,078...13,096,936
Ensembl chrNW_004955411:13,066,789...13,096,938
JBrowse link
G Ybx1 Y-box binding protein 1 involved_in ISO (PMID:19029303) ComplexPortal PMID:19029303 NCBI chrNW_004955537:2,234,052...2,254,528
Ensembl chrNW_004955537:2,234,054...2,251,708
JBrowse link
G Ybx3 Y-box binding protein 3 involved_in ISO (PMID:22711822) BHF-UCL PMID:22711822 NCBI chrNW_004955413:7,090,085...7,111,542
Ensembl chrNW_004955413:7,089,719...7,108,473
JBrowse link
positive regulation of cytoplasmic translational initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sh3bgrl SH3 domain binding glutamate rich protein like involved_in ISO (PMID:34331014) UniProt PMID:34331014 NCBI chrNW_004955529:1,159,704...1,223,222
Ensembl chrNW_004955529:1,159,625...1,223,222
JBrowse link
positive regulation of glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkcd protein kinase C delta involved_in ISO (PMID:19279011) BHF-UCL PMID:19279011 NCBI chrNW_004955430:3,125,066...3,151,857
Ensembl chrNW_004955430:3,124,738...3,153,274
JBrowse link
positive regulation of glutathione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISO (MGI:5616326|PMID:14978030) ParkinsonsUK-UCL PMID:14978030 MGI:5616326 NCBI chrNW_004955424:210,867...279,267
Ensembl chrNW_004955424:226,038...280,593
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in ISO (MGI:5616326|PMID:14978030) ParkinsonsUK-UCL PMID:14978030 MGI:5616326 NCBI chrNW_004955403:19,510,122...19,536,428
Ensembl chrNW_004955403:19,532,103...19,535,944
JBrowse link
positive regulation of mitochondrial translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qbp complement C1q binding protein involved_in ISO (MGI:5487496|PMID:22904065) UniProt PMID:22904065 MGI:5487496 NCBI chrNW_004955467:10,788,142...10,792,272
Ensembl chrNW_004955467:10,788,277...10,792,449
JBrowse link
G Cdk5rap1 CDK5 regulatory subunit associated protein 1 acts_upstream_of_or_within ISO (MGI:5635958|PMID:25738458) MGI PMID:25738458 MGI:5635958 NCBI chrNW_004955422:27,878,048...27,907,157
Ensembl chrNW_004955422:27,879,389...27,906,861
JBrowse link
G Fastkd2 FAST kinase domains 2 involved_in ISO (PMID:27667664) UniProt PMID:27667664 NCBI chrNW_004955457:8,191,861...8,213,003
Ensembl chrNW_004955457:8,189,558...8,211,832
JBrowse link
G Fastkd3 FAST kinase domains 3 involved_in ISO (PMID:27789713) UniProt PMID:27789713 NCBI chrNW_004955504:5,401,956...5,412,216
Ensembl chrNW_004955504:5,400,544...5,411,401
JBrowse link
G LOC102009757 ubiquinol-cytochrome-c reductase complex assembly factor 2 involved_in ISO (PMID:24385928) UniProt PMID:24385928 NCBI chrNW_004955437:2,107,475...2,119,892
Ensembl chrNW_004955437:2,107,475...2,119,892
JBrowse link
G LOC102025968 cytochrome c oxidase assembly factor 3 homolog, mitochondrial involved_in ISO (PMID:23260140) UniProt PMID:23260140 NCBI chrNW_004955451:16,607,495...16,608,732
Ensembl chrNW_004955451:16,607,895...16,608,647
JBrowse link
G Mettl8 methyltransferase 8, tRNA N3-cytidine involved_in ISO (PMID:34774131), (PMID:35017528) UniProt PMID:34774131 PMID:35017528 NCBI chrNW_004955449:3,458,683...3,534,377
Ensembl chrNW_004955449:3,490,568...3,533,584
JBrowse link
G Mief1 mitochondrial elongation factor 1 involved_in ISO (PMID:30215512) UniProt PMID:30215512 NCBI chrNW_004955413:25,387,399...25,401,484
Ensembl chrNW_004955413:25,387,399...25,401,484
JBrowse link
G Mpv17l2 MPV17 mitochondrial inner membrane protein like 2 involved_in ISO (PMID:24948607) UniProt PMID:24948607 NCBI chrNW_004955524:3,224,356...3,226,373
Ensembl chrNW_004955524:3,224,992...3,226,373
JBrowse link
G Mrps27 mitochondrial ribosomal protein S27 involved_in ISO (PMID:22841715) UniProt PMID:22841715 NCBI chrNW_004955575:1,038,317...1,126,923
Ensembl chrNW_004955575:1,039,280...1,126,890
JBrowse link
G Ngrn neugrin, neurite outgrowth associated involved_in ISO (PMID:27667664) UniProt PMID:27667664 NCBI chrNW_004955416:15,074,190...15,080,561
Ensembl chrNW_004955416:15,074,190...15,080,561
JBrowse link
G Nsun4 NOP2/Sun RNA methyltransferase 4 involved_in ISO (MGI:5573024|PMID:24516400) UniProt PMID:24516400 MGI:5573024 NCBI chrNW_004955464:11,934,146...11,962,513
Ensembl chrNW_004955464:11,932,429...11,967,414
JBrowse link
G Rcc1l RCC1 like involved_in ISO (PMID:27667664) UniProt PMID:27667664 NCBI chrNW_004955456:13,285,753...13,300,244
Ensembl chrNW_004955456:13,286,459...13,300,182
JBrowse link
G Rmnd1 required for meiotic nuclear division 1 homolog involved_in ISO (PMID:25604853) UniProt PMID:25604853 NCBI chrNW_004955439:10,151,357...10,193,765 JBrowse link
G Rpusd3 RNA pseudouridine synthase D3 involved_in ISO (PMID:27667664) UniProt PMID:27667664 NCBI chrNW_004955561:1,358,003...1,361,634
Ensembl chrNW_004955561:1,358,197...1,361,619
JBrowse link
G Rpusd4 RNA pseudouridine synthase D4 involved_in ISO (PMID:27667664) UniProt PMID:27667664 NCBI chrNW_004955412:27,231,371...27,239,366
Ensembl chrNW_004955412:27,229,492...27,239,339
JBrowse link
G Trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit involved_in ISO (PMID:27132592) UniProt PMID:27132592 NCBI chrNW_004955427:3,133,225...3,137,070
Ensembl chrNW_004955427:3,135,518...3,136,786
JBrowse link
G Trub2 TruB pseudouridine synthase family member 2 involved_in ISO (PMID:27667664) UniProt PMID:27667664 NCBI chrNW_004955570:826,776...837,116
Ensembl chrNW_004955570:814,725...837,116
JBrowse link
positive regulation of selenocysteine incorporation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpl30 ribosomal protein L30 ISO RGD PMID:15821744 RGD:11038818 NCBI chrNW_004955417:13,764,814...13,767,698
Ensembl chrNW_004955417:13,764,814...13,767,698
JBrowse link
G Secisbp2 SECIS binding protein 2 ISO RGD PMID:15821744 RGD:11038818 NCBI chrNW_004955515:2,697,370...2,729,425
Ensembl chrNW_004955515:2,698,075...2,730,074
JBrowse link
positive regulation of sphingomyelin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in ISO (MGI:4947032|PMID:21177474) UniProt PMID:21177474 MGI:4947032 NCBI chrNW_004955506:3,151,133...3,154,613
Ensembl chrNW_004955506:3,151,133...3,154,613
JBrowse link
G Prkcd protein kinase C delta involved_in ISO (PMID:19279011) BHF-UCL PMID:19279011 NCBI chrNW_004955430:3,125,066...3,151,857
Ensembl chrNW_004955430:3,124,738...3,153,274
JBrowse link
positive regulation of translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcf1 ATP binding cassette subfamily F member 1 involved_in ISO (PMID:19570978) UniProt PMID:19570978 NCBI chrNW_004955583:600,381...607,211
Ensembl chrNW_004955583:600,398...606,820
JBrowse link
G Ago2 argonaute RISC catalytic component 2 involved_in ISO (PMID:17382880) UniProt PMID:17382880 NCBI chrNW_004955461:14,194,268...14,260,949
Ensembl chrNW_004955461:14,205,748...14,253,861
JBrowse link
G Akap6 A-kinase anchoring protein 6 ISO RGD PMID:16306226 RGD:2312613 NCBI chrNW_004955409:28,067,814...28,516,881
Ensembl chrNW_004955409:28,077,621...28,516,944
JBrowse link
G Aurka aurora kinase A involved_in ISO (PMID:18614302) AgBase PMID:18614302 NCBI chrNW_004955445:2,831,073...2,853,151
Ensembl chrNW_004955445:2,831,157...2,853,357
JBrowse link
G Barhl2 BarH like homeobox 2 acts_upstream_of_or_within ISO (MGI:2654373|PMID:12657654) MGI PMID:12657654 MGI:2654373 NCBI chrNW_004955423:3,516,973...3,522,459
Ensembl chrNW_004955423:3,516,660...3,522,536
JBrowse link
G Bcl3 BCL3 transcription coactivator involved_in ISO (PMID:16384933) UniProt PMID:16384933 NCBI chrNW_004955555:1,898,280...1,911,466
Ensembl chrNW_004955555:1,856,250...1,911,466
JBrowse link
G Cdk4 cyclin dependent kinase 4 ISO RGD PMID:12163013 RGD:704385 NCBI chrNW_004955458:5,457,927...5,460,718
Ensembl chrNW_004955458:5,453,732...5,460,718
JBrowse link
G Cirbp cold inducible RNA binding protein involved_in ISO (PMID:11574538) UniProt PMID:11574538 NCBI chrNW_004955495:6,634,389...6,640,800
Ensembl chrNW_004955495:6,634,394...6,640,800
JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 involved_in ISO (PMID:20662813) RGD
AgBase
PMID:19864575 PMID:20662813 RGD:9685154 NCBI chrNW_004955416:13,963,300...14,038,691
Ensembl chrNW_004955416:13,981,657...14,039,705
JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (MGI:5648736|PMID:26074003)
(MGI:5300629|PMID:22153079), (MGI:5795795|PMID:26074071)
UniProt PMID:22153079 PMID:26074003 PMID:26074071 MGI:5300629 MGI:5648736 MGI:5795795 NCBI chrNW_004955425:1,032,446...1,224,300
Ensembl chrNW_004955425:1,057,575...1,224,300
JBrowse link
G Ddx39b DExD-box helicase 39B ISO RGD PMID:20116367 RGD:10401141 NCBI chrNW_004955437:72,835...84,045
Ensembl chrNW_004955437:72,835...84,384
JBrowse link
G Ddx3x DEAD-box helicase 3 X-linked involved_in ISO (PMID:28842590)
(PMID:18596238), (PMID:22872150)
UniProt PMID:18596238 PMID:22872150 PMID:28842590 NCBI chrNW_004955565:1,387,043...1,403,624
Ensembl chrNW_004955565:1,386,973...1,404,220
JBrowse link
G Eef2 eukaryotic translation elongation factor 2 involved_in ISO (PMID:23184662) RGD
UniProt
PMID:2390990 PMID:23184662 RGD:10401630 NCBI chrNW_004955495:4,800,103...4,807,714
Ensembl chrNW_004955495:4,799,922...4,807,252
JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon ISO RGD PMID:20484009 RGD:11041876 NCBI chrNW_004955420:23,313,405...23,322,748
Ensembl chrNW_004955420:23,309,378...23,322,698
JBrowse link
G Eif3d eukaryotic translation initiation factor 3 subunit D involved_in ISO (PMID:24092755) ParkinsonsUK-UCL PMID:24092755 NCBI chrNW_004955413:23,096,440...23,110,312
Ensembl chrNW_004955413:23,092,749...23,110,312
JBrowse link
G Eif3e eukaryotic translation initiation factor 3 subunit E involved_in ISO (PMID:24092755) ParkinsonsUK-UCL PMID:24092755 NCBI chrNW_004955417:30,823,555...30,858,975
Ensembl chrNW_004955417:30,822,027...30,858,975
JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 involved_in ISO (PMID:18423201) UniProt PMID:18423201 NCBI chrNW_004955506:2,749,534...2,760,873
Ensembl chrNW_004955506:2,749,534...2,760,873
JBrowse link
G Eif4g2 eukaryotic translation initiation factor 4 gamma 2 ISO RGD PMID:22514323 RGD:10755512 NCBI chrNW_004955414:26,389,125...26,399,916
Ensembl chrNW_004955414:26,389,125...26,399,916
JBrowse link
G Eif4g3 eukaryotic translation initiation factor 4 gamma 3 acts_upstream_of_or_within
involved_in
ISO (MGI:4442992|PMID:20430745)
(MGI:7330283|PMID:35951695)
MGI
UniProt
PMID:20430745 PMID:35951695 MGI:4442992 MGI:7330283 NCBI chrNW_004955452:1,328,103...1,625,341
Ensembl chrNW_004955452:1,328,345...1,625,934
JBrowse link
G Eif6 eukaryotic translation initiation factor 6 involved_in ISO (MGI:5699484|PMID:26383020) UniProt PMID:26383020 MGI:5699484 NCBI chrNW_004956210:226...6,819
Ensembl chrNW_004956210:21...9,816
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 acts_upstream_of_or_within ISO (MGI:5287957|PMID:21613615)
(PMID:21613615)
MGI PMID:21613615 MGI:5287957 NCBI chrNW_004955563:1,283,424...1,315,283
Ensembl chrNW_004955563:1,283,421...1,315,283
JBrowse link
G Ep300 E1A binding protein p300 ISO increase in protein:DNA ratio RGD PMID:12477714 RGD:1298794 NCBI chrNW_004955413:26,647,553...26,727,875
Ensembl chrNW_004955413:26,648,339...26,727,933
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 involved_in ISO (PMID:21555369) UniProt PMID:21555369 NCBI chrNW_004955451:14,442,816...14,456,009
Ensembl chrNW_004955451:14,442,816...14,459,379
JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 involved_in ISO (PMID:19097999), (PMID:19166269)
(MGI:3831580|PMID:19166269)
UniProt
CACAO
PMID:19097999 PMID:19166269 MGI:3831580 NCBI chrNW_004955498:566,741...594,837
Ensembl chrNW_004955498:566,688...595,360
JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in ISO (MGI:7330283|PMID:35951695)
(PMID:17382880), (PMID:34731628), (PMID:36306353)
UniProt PMID:17382880 PMID:34731628 PMID:35951695 PMID:36306353 MGI:7330283 NCBI chrNW_004955420:9,903,736...9,966,100
Ensembl chrNW_004955420:9,903,736...9,966,100
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO (PMID:24423872) UniProt PMID:24423872 NCBI chrNW_004955433:6,452,931...6,470,209
Ensembl chrNW_004955433:6,454,454...6,469,904
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L ISO RGD PMID:19273590 RGD:9999430 NCBI chrNW_004955468:668,177...683,540
Ensembl chrNW_004955468:670,559...683,540
JBrowse link
G Il6 interleukin 6 involved_in ISO (PMID:16732314) UniProt PMID:16732314 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Itga2 integrin subunit alpha 2 ISO osteocalcin RGD PMID:10867645 RGD:2307406 NCBI chrNW_004955446:14,309,516...14,421,991
Ensembl chrNW_004955446:14,309,349...14,422,170
JBrowse link
G Krt17 keratin 17 involved_in ISO (MGI:3625597|PMID:16710422) UniProt PMID:16710422 MGI:3625597 NCBI chrNW_004955451:15,940,137...15,944,392 JBrowse link
G Larp4 La ribonucleoprotein 4 involved_in ISO (PMID:21098120) UniProt PMID:21098120 NCBI chrNW_004955547:930,988...996,877
Ensembl chrNW_004955547:930,988...996,877
JBrowse link
G Larp4b La ribonucleoprotein 4B involved_in ISO (PMID:20573744) UniProt PMID:20573744 NCBI chrNW_004955492:113,900...197,753
Ensembl chrNW_004955492:138,374...193,145
JBrowse link
G Lin28a lin-28 homolog A acts_upstream_of_or_within ISO (MGI:3709663|PMID:17473174) MGI PMID:17473174 MGI:3709663 NCBI chrNW_004955452:5,793,583...5,808,662
Ensembl chrNW_004955452:5,793,583...5,808,662
JBrowse link
G LOC102009223 cytochrome P450 1B1 ISO RGD PMID:20439821 RGD:7829726 NCBI chrNW_004955441:5,803,397...5,812,131
Ensembl chrNW_004955441:5,803,032...5,812,131
JBrowse link
G Mapk1 mitogen-activated protein kinase 1 ISO RGD PMID:15027896 RGD:1626220 NCBI chrNW_004955442:17,284,232...17,380,026
Ensembl chrNW_004955442:17,284,232...17,380,020
JBrowse link
G Mapk3 mitogen-activated protein kinase 3 ISO RGD PMID:15027896 RGD:1626220 NCBI chrNW_004955493:6,870,699...6,876,836
Ensembl chrNW_004955493:6,869,668...6,879,152
JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit involved_in ISO (PMID:29290617) ARUK-UCL PMID:29290617 NCBI chrNW_004955428:21,475,981...21,507,730
Ensembl chrNW_004955428:21,475,981...21,507,730
JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:30559377) UniProt PMID:30559377 NCBI chrNW_004955550:2,211,270...2,227,715
Ensembl chrNW_004955550:2,211,270...2,227,715
JBrowse link
G Mettl5 methyltransferase 5, N6-adenosine involved_in ISO (MGI:6436417|PMID:32217665), (MGI:6505165|PMID:32783360)
(PMID:33357433)
UniProt PMID:32217665 PMID:32783360 PMID:33357433 MGI:6436417 MGI:6505165 NCBI chrNW_004955449:4,795,925...4,806,757
Ensembl chrNW_004955449:4,795,925...4,806,847
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO (PMID:18762023) RGD
UniProt
PMID:15525761 PMID:18762023 RGD:2307416 NCBI chrNW_004955486:2,487,642...2,599,694
Ensembl chrNW_004955486:2,487,642...2,599,694
JBrowse link
G Nat10 N-acetyltransferase 10 involved_in ISO (PMID:30449621) UniProt PMID:30449621 NCBI chrNW_004955422:12,085,970...12,122,644
Ensembl chrNW_004955422:12,085,970...12,122,425
JBrowse link
G Niban1 niban apoptosis regulator 1 involved_in ISO (MGI:3716265|PMID:17588536) UniProt PMID:17588536 MGI:3716265 NCBI chrNW_004955406:23,437,430...23,523,307 JBrowse link
G Npm1 nucleophosmin 1 involved_in ISO (PMID:12882984) UniProt PMID:12882984 NCBI chrNW_004955408:24,151,070...24,218,783 JBrowse link
G Nsun5 NOP2/Sun RNA methyltransferase 5 involved_in ISO (PMID:31428936), (PMID:31722427) UniProt PMID:31428936 PMID:31722427 NCBI chrNW_004955456:14,331,890...14,336,650
Ensembl chrNW_004955456:14,331,924...14,335,973
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in ISO (PMID:34074792) UniProt PMID:34074792 NCBI chrNW_004955475:11,062,258...11,112,252
Ensembl chrNW_004955475:11,062,076...11,114,169
JBrowse link
G Otud6b OTU deubiquitinase 6B involved_in ISO (PMID:27864334) UniProt PMID:27864334 NCBI chrNW_004955417:7,844,311...7,859,032
Ensembl chrNW_004955417:7,844,292...7,858,658
JBrowse link
G Pcif1 phosphorylated CTD interacting factor 1 involved_in ISO (PMID:30467178) UniProt PMID:30467178 NCBI chrNW_004955445:11,355,227...11,368,392
Ensembl chrNW_004955445:11,355,227...11,368,392
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (MGI:5558956|PMID:24553947) ParkinsonsUK-UCL PMID:24553947 MGI:5558956 NCBI chrNW_004955452:1,171,115...1,186,338
Ensembl chrNW_004955452:1,171,205...1,185,125
JBrowse link
G Pld1 phospholipase D1 involved_in ISO (PMID:25361009) CACAO PMID:25361009 NCBI chrNW_004955420:1,697,716...1,892,741
Ensembl chrNW_004955420:1,696,751...1,892,741
JBrowse link
G Plxnb2 plexin B2 involved_in ISO (PMID:29100074) CACAO PMID:29100074 NCBI chrNW_004955413:33,297,617...33,314,371
Ensembl chrNW_004955413:33,298,317...33,309,961
JBrowse link
G Poldip3 DNA polymerase delta interacting protein 3 involved_in ISO (PMID:18423201) UniProt PMID:18423201 NCBI chrNW_004955413:27,944,109...27,968,156
Ensembl chrNW_004955413:27,943,520...27,968,156
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (MGI:6414739|PMID:32103174) UniProt PMID:32103174 MGI:6414739 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867
JBrowse link
G Prmt1 protein arginine methyltransferase 1 involved_in ISO (PMID:30765518) UniProt PMID:30765518 NCBI chrNW_004955559:1,205,340...1,215,672
Ensembl chrNW_004955559:1,203,283...1,215,021
JBrowse link
G Prr16 proline rich 16 involved_in ISO (PMID:24656129) UniProt PMID:24656129 NCBI chrNW_004955408:40,118,918...40,251,144 JBrowse link
G Ptafr platelet activating factor receptor ISO RGD PMID:8216700 RGD:10043166 NCBI chrNW_004955452:7,309,854...7,345,579
Ensembl chrNW_004955452:7,311,901...7,312,929
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 ISO RGD PMID:19273590 RGD:9999430 NCBI chrNW_004955495:6,990,565...7,002,492
Ensembl chrNW_004955495:6,987,182...7,002,492
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta ISO RGD PMID:12890645 RGD:1642632 NCBI chrNW_004955403:49,856,056...49,970,800
Ensembl chrNW_004955403:49,855,541...49,973,225
JBrowse link
G Pym1 PYM homolog 1, exon junction complex associated factor involved_in ISO (PMID:18026120) UniProt PMID:18026120 NCBI chrNW_004955458:3,499,217...3,515,108
Ensembl chrNW_004955458:3,498,822...3,514,839
JBrowse link
G Rbm3 RNA binding motif protein 3 involved_in ISO PMID:17403028 UniProt PMID:17403028 RGD:8554383 NCBI chrNW_004955543:166,891...173,987
Ensembl chrNW_004955543:166,891...170,488
JBrowse link
G Rbms3 RNA binding motif single stranded interacting protein 3 acts_upstream_of_or_within ISO (MGI:5501019|PMID:22372950) MGI PMID:22372950 MGI:5501019 NCBI chrNW_004955430:20,714,647...21,394,049
Ensembl chrNW_004955430:20,320,085...21,387,681
JBrowse link
G Rhoa ras homolog family member A ISO RGD PMID:17562852 RGD:1642806 NCBI chrNW_004955532:1,300,821...1,347,453
Ensembl chrNW_004955532:1,300,462...1,347,451
JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chrNW_004955467:8,519,760...8,525,514
Ensembl chrNW_004955467:8,519,760...8,527,182
JBrowse link
G Rpl5 ribosomal protein L5 involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chrNW_004955423:1,748,809...1,758,622
Ensembl chrNW_004955423:1,748,809...1,758,622
JBrowse link
G Rplp1 ribosomal protein lateral stalk subunit P1 ISO RGD PMID:9242705 RGD:11039477 NCBI chrNW_004955450:7,053,378...7,055,858
Ensembl chrNW_004955450:7,053,378...7,055,858
JBrowse link
G Rplp2 ribosomal protein lateral stalk subunit P2 ISO RGD PMID:9242705 RGD:11039477 NCBI chrNW_004955476:11,312,051...11,314,334 JBrowse link
G Rps27l ribosomal protein S27 like involved_in ISO (PMID:18056458) UniProt PMID:18056458 NCBI chrNW_004955450:12,122,948...12,126,167
Ensembl chrNW_004955450:12,122,921...12,128,101
JBrowse link
G Rps3a ribosomal protein S3A ISO RGD PMID:8877097 RGD:11040965 NCBI chrNW_004955471:5,705,829...5,710,683
Ensembl chrNW_004955471:5,705,829...5,710,683
JBrowse link
G Rps4x ribosomal protein S4 X-linked involved_in ISO (PMID:1795030) UniProt PMID:1795030 NCBI chrNW_004955475:11,656,537...11,661,803
Ensembl chrNW_004955475:11,655,813...11,662,391
JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 involved_in ISO (PMID:18423201) UniProt PMID:18423201 NCBI chrNW_004955451:3,181,085...3,225,610 JBrowse link
G Samd4a sterile alpha motif domain containing 4A acts_upstream_of_or_within ISO (PMID:16221671) MGI PMID:16221671 NCBI chrNW_004955409:8,716,432...8,916,398
Ensembl chrNW_004955409:8,712,061...8,916,816
JBrowse link
G Serp1 stress associated endoplasmic reticulum protein 1 acts_upstream_of_or_within ISO (MGI:3619104|PMID:16415102) MGI PMID:16415102 MGI:3619104 NCBI chrNW_004955448:1,738,242...1,742,807
Ensembl chrNW_004955448:1,738,242...1,743,107
JBrowse link
G Sox4 SRY-box transcription factor 4 involved_in ISO (PMID:19234109) UniProt PMID:19234109 NCBI chrNW_004955483:5,076,664...5,077,059 JBrowse link
G Syncrip synaptotagmin binding cytoplasmic RNA interacting protein ISO RGD PMID:17403780 RGD:10059417 NCBI chrNW_004955411:13,068,078...13,096,936
Ensembl chrNW_004955411:13,066,789...13,096,938
JBrowse link
G Tarbp2 TARBP2 subunit of RISC loading complex acts_upstream_of_or_within ISO (MGI:1338603|PMID:10369260) MGI PMID:10369260 MGI:1338603 NCBI chrNW_004955458:793,753...798,755
Ensembl chrNW_004955458:793,759...798,806
JBrowse link
G Tent5b terminal nucleotidyltransferase 5B involved_in ISO (PMID:32009146) UniProt PMID:32009146 NCBI chrNW_004955452:6,345,152...6,353,479
Ensembl chrNW_004955452:6,345,152...6,354,047
JBrowse link
G Thbs1 thrombospondin 1 involved_in ISO (PMID:15700281) BHF-UCL PMID:15700281 NCBI chrNW_004955416:6,490,034...6,506,419
Ensembl chrNW_004955416:6,489,451...6,506,419
JBrowse link
G Ucn urocortin ISO RGD PMID:11087261 RGD:1642796 NCBI chrNW_004955469:9,277,637...9,278,641
Ensembl chrNW_004955469:9,277,637...9,278,641
JBrowse link
G Upf3a UPF3A regulator of nonsense mediated mRNA decay involved_in ISO (PMID:16601204) UniProt PMID:16601204 NCBI chrNW_004955404:25,556...36,730 JBrowse link
G Upf3b UPF3B regulator of nonsense mediated mRNA decay involved_in ISO (PMID:16601204) UniProt PMID:16601204 NCBI chrNW_004955534:176,553...193,033
Ensembl chrNW_004955534:176,522...193,319
JBrowse link
G Ythdf1 YTH N6-methyladenosine RNA binding protein F1 involved_in ISO (PMID:28106072), (PMID:28106076)
(MGI:6241448|PMID:30401835), (MGI:6281071|PMID:30728504), (MGI:6316558|PMID:30843071)
UniProt PMID:28106072 PMID:28106076 PMID:30401835 PMID:30728504 PMID:30843071 MGI:6241448 MGI:6281071 MGI:6316558 NCBI chrNW_004955528:935,182...951,722
Ensembl chrNW_004955528:935,182...951,722
JBrowse link
G Ythdf3 YTH N6-methyladenosine RNA binding protein F3 involved_in ISO (PMID:28106072) UniProt PMID:28106072 NCBI chrNW_004955444:15,758,596...15,789,979
Ensembl chrNW_004955444:15,758,596...15,789,979
JBrowse link
G Zcchc4 zinc finger CCHC-type containing 4 involved_in ISO (PMID:30531910), (PMID:31799605) UniProt PMID:30531910 PMID:31799605 NCBI chrNW_004955443:19,664,773...19,717,054
Ensembl chrNW_004955443:19,666,262...19,717,568
JBrowse link
positive regulation of translation in response to endoplasmic reticulum stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx3x DEAD-box helicase 3 X-linked involved_in ISO (PMID:29062139) UniProt PMID:29062139 NCBI chrNW_004955565:1,387,043...1,403,624
Ensembl chrNW_004955565:1,386,973...1,404,220
JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma 1 involved_in ISO (PMID:29062139) UniProt PMID:29062139 NCBI chrNW_004955420:23,161,541...23,179,788
Ensembl chrNW_004955420:23,161,078...23,180,568
JBrowse link
G Nck1 NCK adaptor protein 1 involved_in ISO (PMID:14676213)
(MGI:5613478|PMID:14676213)
ParkinsonsUK-UCL PMID:14676213 MGI:5613478 NCBI chrNW_004955501:1,867,956...1,963,091 JBrowse link
G Nck2 NCK adaptor protein 2 involved_in ISO (MGI:5613478|PMID:14676213) ParkinsonsUK-UCL PMID:14676213 MGI:5613478 NCBI chrNW_004955470:10,487,962...10,593,046
Ensembl chrNW_004955470:10,487,481...10,593,046
JBrowse link
positive regulation of translation in response to stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkch protein kinase C eta involved_in ISO (PMID:19797084) UniProt PMID:19797084 NCBI chrNW_004955466:8,178,323...8,393,446
Ensembl chrNW_004955466:8,176,876...8,393,446
JBrowse link
G Slc35a4 solute carrier family 35 member A4 involved_in ISO (PMID:25621764) UniProt PMID:25621764 NCBI chrNW_004955418:114,916...116,878
Ensembl chrNW_004955418:115,895...116,863
JBrowse link
positive regulation of translation initiation in response to endoplasmic reticulum stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajc3 DnaJ heat shock protein family (Hsp40) member C3 involved_in ISO (MGI:5617428|PMID:25329545) UniProt PMID:25329545 MGI:5617428 NCBI chrNW_004955404:14,361,540...14,412,533
Ensembl chrNW_004955404:14,360,832...14,412,533
JBrowse link
positive regulation of translational elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpl12 ribosomal protein L12 ISO RGD PMID:11729183 RGD:11035234 NCBI chrNW_004955419:1,154,397...1,157,508
Ensembl chrNW_004955419:1,154,397...1,157,500
JBrowse link
G Usp16 ubiquitin specific peptidase 16 involved_in ISO (PMID:20550933) UniProt PMID:20550933 NCBI chrNW_004955407:28,375,246...28,413,279 JBrowse link
positive regulation of translational fidelity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5rap1 CDK5 regulatory subunit associated protein 1 acts_upstream_of_or_within ISO (MGI:5635958|PMID:25738458) MGI PMID:25738458 MGI:5635958 NCBI chrNW_004955422:27,878,048...27,907,157
Ensembl chrNW_004955422:27,879,389...27,906,861
JBrowse link
positive regulation of translational initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Boll boule homolog, RNA binding protein involved_in ISO (PMID:16001084) UniProt PMID:16001084 NCBI chrNW_004955403:2,917,694...2,963,470
Ensembl chrNW_004955403:2,920,722...2,958,074
JBrowse link
G Dazl deleted in azoospermia like involved_in ISO (PMID:16001084)
(MGI:3689792|PMID:16001084)
UniProt PMID:16001084 MGI:3689792 NCBI chrNW_004955430:8,869,419...8,880,782
Ensembl chrNW_004955430:8,869,352...8,880,789
JBrowse link
G Ddx3x DEAD-box helicase 3 X-linked involved_in ISO (PMID:20837705) UniProt PMID:20837705 NCBI chrNW_004955565:1,387,043...1,403,624
Ensembl chrNW_004955565:1,386,973...1,404,220
JBrowse link
G Habp4 hyaluronan binding protein 4 involved_in ISO (PMID:21771594) UniProt PMID:21771594 NCBI chrNW_004955422:23,449,175...23,475,919
Ensembl chrNW_004955422:23,450,251...23,475,984
JBrowse link
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 involved_in ISO (PMID:21613532) UniProt PMID:21613532 NCBI chrNW_004955452:10,413,883...10,458,518
Ensembl chrNW_004955452:10,413,883...10,440,678
JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:29244122) CACAO PMID:29244122 NCBI chrNW_004955408:9,002,443...9,080,938
Ensembl chrNW_004955408:9,002,458...9,080,938
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO (PMID:22578813), (PMID:29750193) UniProt PMID:22578813 PMID:29750193 NCBI chrNW_004955486:2,487,642...2,599,694
Ensembl chrNW_004955486:2,487,642...2,599,694
JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 involved_in ISO (PMID:16763566)
(PMID:1922062)
UniProt PMID:1922062 PMID:16763566 NCBI chrNW_004955451:3,181,085...3,225,610 JBrowse link
G Rps6kb2 ribosomal protein S6 kinase B2 involved_in ISO (PMID:16763566)
(PMID:29750193)
UniProt PMID:16763566 PMID:29750193 NCBI chrNW_004955422:18,043,785...18,050,406
Ensembl chrNW_004955422:18,041,729...18,050,406
JBrowse link
G Uhmk1 U2AF homology motif kinase 1 involved_in ISO (MGI:3835232|PMID:19015237) BHF-UCL PMID:19015237 MGI:3835232 NCBI chrNW_004955462:13,819,107...13,837,679 JBrowse link
G Ythdf1 YTH N6-methyladenosine RNA binding protein F1 NOT|involved_in ISO (PMID:32492408)
(MGI:6490006|PMID:32943573)
(PMID:26046440)
UniProt PMID:26046440 PMID:32492408 PMID:32943573 MGI:6490006 NCBI chrNW_004955528:935,182...951,722
Ensembl chrNW_004955528:935,182...951,722
JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein F2 NOT|involved_in ISO (PMID:32492408)
(MGI:6490006|PMID:32943573)
UniProt PMID:32492408 PMID:32943573 MGI:6490006 NCBI chrNW_004955452:7,783,398...7,815,468 JBrowse link
G Ythdf3 YTH N6-methyladenosine RNA binding protein F3 involved_in
NOT|involved_in
ISO (PMID:28106076)
(MGI:6490006|PMID:32943573)
(PMID:32492408)
UniProt PMID:28106076 PMID:32492408 PMID:32943573 MGI:6490006 NCBI chrNW_004955444:15,758,596...15,789,979
Ensembl chrNW_004955444:15,758,596...15,789,979
JBrowse link
positive regulation of translational initiation by iron term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rxra retinoid X receptor alpha acts_upstream_of_or_within ISO (MGI:5538466|PMID:23775127) MGI PMID:23775127 MGI:5538466 NCBI chrNW_004955513:3,313,544...3,386,544
Ensembl chrNW_004955513:3,335,897...3,386,994
JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within ISO (MGI:2152007|PMID:11588035) MGI PMID:11588035 MGI:2152007 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700
JBrowse link
positive regulation of translational initiation in response to starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:2149467|PMID:10655230)
(MGI:3589053|PMID:16121183)
UniProt PMID:10655230 PMID:16121183 MGI:2149467 MGI:3589053 NCBI chrNW_004955416:6,897,897...7,005,602
Ensembl chrNW_004955416:6,897,848...7,009,965
JBrowse link
positive regulation of translational termination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jmjd4 jumonji domain containing 4 involved_in ISO (PMID:24486019) UniProt PMID:24486019 NCBI chrNW_004955581:525,545...530,589
Ensembl chrNW_004955581:525,561...529,603
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12307
    metabolic process 7442
      nitrogen compound metabolic process 6074
        positive regulation of nitrogen compound metabolic process 2454
          positive regulation of amide metabolic process 166
            positive regulation of amide catabolic process + 0
            positive regulation of amyloid-beta formation 20
            positive regulation of antimicrobial peptide biosynthetic process + 1
            positive regulation of butyryl-CoA biosynthetic process from acetyl-CoA 0
            positive regulation of butyryl-CoA catabolic process to butanol 0
            positive regulation of butyryl-CoA catabolic process to butyrate 0
            positive regulation of ceramide biosynthetic process + 8
            positive regulation of emericellamide biosynthetic process + 0
            positive regulation of gliotoxin biosynthetic process 0
            positive regulation of glucosylceramide catabolic process 1
            positive regulation of glutathione biosynthetic process 2
            positive regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway 0
            positive regulation of penicillin metabolic process + 0
            positive regulation of peptide hormone processing 0
            positive regulation of pseurotin A biosynthetic process 0
            positive regulation of siderophore biosynthetic process + 0
            positive regulation of sphingomyelin catabolic process 2
            positive regulation of tensidol A biosynthetic process 0
            positive regulation of tensidol B biosynthetic process 0
            positive regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA 0
            positive regulation of translation + 134
Path 2
Term Annotations click to browse term
  biological_process 12307
    biological regulation 8835
      regulation of biological process 8583
        regulation of metabolic process 4806
          positive regulation of metabolic process 3160
            positive regulation of nitrogen compound metabolic process 2454
              positive regulation of amide metabolic process 166
                positive regulation of amide catabolic process + 0
                positive regulation of amyloid-beta formation 20
                positive regulation of antimicrobial peptide biosynthetic process + 1
                positive regulation of butyryl-CoA biosynthetic process from acetyl-CoA 0
                positive regulation of butyryl-CoA catabolic process to butanol 0
                positive regulation of butyryl-CoA catabolic process to butyrate 0
                positive regulation of ceramide biosynthetic process + 8
                positive regulation of emericellamide biosynthetic process + 0
                positive regulation of gliotoxin biosynthetic process 0
                positive regulation of glucosylceramide catabolic process 1
                positive regulation of glutathione biosynthetic process 2
                positive regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway 0
                positive regulation of penicillin metabolic process + 0
                positive regulation of peptide hormone processing 0
                positive regulation of pseurotin A biosynthetic process 0
                positive regulation of siderophore biosynthetic process + 0
                positive regulation of sphingomyelin catabolic process 2
                positive regulation of tensidol A biosynthetic process 0
                positive regulation of tensidol B biosynthetic process 0
                positive regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA 0
                positive regulation of translation + 134
paths to the root