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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of cellular amide metabolic process
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Accession:GO:0034250 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amides.
Synonyms:exact_synonym: positive regulation of amide metabolism


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negative regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent4a terminal nucleotidyltransferase 4A involved_in ISO (PMID:30026317) RGD PMID:30026317 NCBI chr 1:33,766,121...33,799,433
Ensembl chr 1:33,765,672...33,799,433
JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO (PMID:30026317) RGD PMID:30026317 NCBI chr19:18,807,616...18,868,969
Ensembl chr19:18,807,525...18,869,537
JBrowse link
G Tob1 transducer of ErbB-2.1 involved_in ISO
IEA
ISS
(PMID:18377426)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:18377426 GO_REF:0000024 GO_REF:0000107 NCBI chr10:79,163,093...79,165,131
Ensembl chr10:79,160,154...79,165,215
JBrowse link
positive regulation of amyloid-beta formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of
involved_in
ISO
IEA
IMP
(PMID:22086926)
GO_REF:0000107
RGD
Ensembl
PMID:22086926 PMID:22086926 GO_REF:0000107, RGD:14697726 NCBI chr 3:8,244,515...8,264,545
Ensembl chr 3:8,244,639...8,264,537
JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO (PMID:17293612) RGD PMID:17293612 NCBI chr20:9,126,687...9,182,948
Ensembl chr20:9,126,687...9,182,948
JBrowse link
G Apoe apolipoprotein E involved_in ISO (PMID:24154541), (PMID:24259049) RGD PMID:24154541 PMID:24259049 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Casp3 caspase 3 involved_in IDA
ISO
PMID:17553422
(PMID:17553422)
RGD PMID:17553422 PMID:17553422 RGD:13825190 NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648
JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit involved_in IEA
ISO
GO_REF:0000107
UniProtKB:P05067 (MGI:4437154|PMID:20164328)
Ensembl
RGD
PMID:20164328 GO_REF:0000107 MGI:4437154 NCBI chr 1:116,715,286...116,837,223
Ensembl chr 1:116,714,711...116,837,240
JBrowse link
G Clu clusterin involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:2384259|PMID:12145324)
GO_REF:0000024
Ensembl
RGD
Alzheimers_University_of_Toronto
PMID:12145324 GO_REF:0000024 GO_REF:0000107 MGI:2384259 NCBI chr15:40,161,068...40,200,315
Ensembl chr15:40,174,617...40,200,315
JBrowse link
G Csnk1e casein kinase 1, epsilon IDA RGD PMID:17360493 RGD:10395238 NCBI chr 7:110,983,322...111,006,926
Ensembl chr 7:110,983,318...111,006,794
JBrowse link
G Efna1 ephrin A1 involved_in ISO (PMID:24217950) RGD PMID:24217950 NCBI chr 2:174,681,676...174,690,306
Ensembl chr 2:174,681,682...174,690,866
JBrowse link
G Epha4 Eph receptor A4 involved_in ISO UniProtKB:P20827 (PMID:24217950) RGD PMID:24217950 NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
JBrowse link
G Gsap gamma-secretase activating protein involved_in IBA
ISO
PMID:21873635
(MGI:4830390|PMID:20811458)
(PMID:20811458)
RGD PMID:20811458 PMID:21873635 MGI:4830390, RGD:13792537 NCBI chr 4:13,813,046...13,907,875
Ensembl chr 4:13,813,046...13,907,814
JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha involved_in ISO UniProtKB:P49841 (PMID:12761548) RGD PMID:12761548 NCBI chr 1:80,815,843...80,825,732
Ensembl chr 1:80,815,850...80,825,802
JBrowse link
G Ifng interferon gamma involved_in ISO UniProtKB:P05067|UniProtKB:P10636|UniProtKB:P49768 (PMID:19808651)
UniProtKB:P05067|UniProtKB:P15261 (MGI:3697769|PMID:17255335)
RGD PMID:17255335 PMID:19808651 MGI:3697769 NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
JBrowse link
G Ifngr1 interferon gamma receptor 1 involved_in ISO UniProtKB:P01579|UniProtKB:P05067 (MGI:3697769|PMID:17255335) RGD PMID:17255335 MGI:3697769 NCBI chr 1:14,333,167...14,351,799
Ensembl chr 1:14,333,187...14,351,785
JBrowse link
G Lrrtm3 leucine rich repeat transmembrane neuronal 3 acts_upstream_of_or_within ISO (MGI:3695648|PMID:17098871)
(PMID:17098871)
RGD PMID:17098871 MGI:3695648 NCBI chr20:24,515,627...24,689,669
Ensembl chr20:24,515,627...24,689,669
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in ISO
ISS
IEA
(PMID:24577224)
(MGI:5432454|PMID:22539346), (MGI:5560380|PMID:24577224)
GO_REF:0000024
GO_REF:0000107
RGD
Alzheimers_University_of_Toronto
Ensembl
PMID:22539346 PMID:24577224 GO_REF:0000024 GO_REF:0000107 MGI:5432454 MGI:5560380 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit acts_upstream_of ISO (MGI:6414694|PMID:21329555) RGD PMID:21329555 MGI:6414694 NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:6114922|PMID:24305806)
(PMID:24305806)
Ensembl
RGD
PMID:24305806 GO_REF:0000107 MGI:6114922 NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031
JBrowse link
G Slc2a13 solute carrier family 2 member 13 involved_in ISO UniProtKB:P05067-4 (PMID:26094765) RGD PMID:26094765 NCBI chr 7:122,399,329...122,726,605
Ensembl chr 7:122,399,330...122,726,605
JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of ISO (PMID:14701757) RGD PMID:14701757 NCBI chr 7:133,541,302...133,571,961
Ensembl chr 7:133,541,491...133,571,961
JBrowse link
G Tnf tumor necrosis factor involved_in ISO (MGI:3697769|PMID:17255335) RGD PMID:17255335 MGI:3697769 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
positive regulation of antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide-binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (MGI:3775881|PMID:18167348) RGD PMID:18167348 MGI:3775881 NCBI chr19:18,379,720...18,422,817
Ensembl chr19:18,382,439...18,417,177
JBrowse link
positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide-binding oligomerization domain containing 2 acts_upstream_of_or_within ISO MGI:3529594 (MGI:3528786|PMID:15692051) RGD PMID:15692051 MGI:3528786 NCBI chr19:18,379,720...18,422,817
Ensembl chr19:18,382,439...18,417,177
JBrowse link
positive regulation of cap-dependent translational initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nck1 NCK adaptor protein 1 involved_in ISO (PMID:11959995) RGD PMID:11959995 NCBI chr 8:101,018,610...101,079,237
Ensembl chr 8:101,018,702...101,079,300
JBrowse link
positive regulation of cap-independent translational initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl3 methyltransferase-like 3 involved_in ISO (PMID:26593424) RGD PMID:26593424 NCBI chr15:25,002,505...25,014,097
Ensembl chr15:25,003,172...25,014,041
JBrowse link
G Nck1 NCK adaptor protein 1 involved_in ISO (PMID:11959995) RGD PMID:11959995 NCBI chr 8:101,018,610...101,079,237
Ensembl chr 8:101,018,702...101,079,300
JBrowse link
G Ythdf2 YTH N(6)-methyladenosine RNA binding protein 2 involved_in ISO (PMID:26458103) RGD PMID:26458103 NCBI chr 5:144,381,426...144,407,126
Ensembl chr 5:144,381,431...144,408,144
JBrowse link
positive regulation of ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccn1 cellular communication network factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3849354|PMID:19364818)
Ensembl
RGD
PMID:19364818 GO_REF:0000107 MGI:3849354 NCBI chr 2:234,562,410...234,565,370
Ensembl chr 2:234,562,408...234,565,484
JBrowse link
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:4947032|PMID:21177474)
UniProt
RGD
PMID:21177474 GO_REF:0000024 MGI:4947032 NCBI chr10:104,242,223...104,246,589
Ensembl chr10:104,242,223...104,246,589
JBrowse link
G Pla2g6 phospholipase A2 group VI involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:18936091 PMID:21873635 RGD:6482750, RGD:13792537 NCBI chr 7:110,851,378...110,891,557
Ensembl chr 7:110,851,378...110,891,114
JBrowse link
G Prkcd protein kinase C, delta involved_in ISO
IEA
(PMID:19279011)
GO_REF:0000107
RGD
Ensembl
PMID:19279011 GO_REF:0000107 NCBI chr16:5,769,226...5,807,214
Ensembl chr16:5,769,215...5,799,352
JBrowse link
G Sirt3 sirtuin 3 involved_in ISO (MGI:5755322|PMID:26620563) RGD PMID:26620563 MGI:5755322 NCBI chr 1:195,942,066...195,964,472
Ensembl chr 1:195,942,073...195,964,808
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 IMP RGD PMID:20096352 RGD:10041064 NCBI chr19:34,162,337...34,245,786
Ensembl chr19:34,162,341...34,245,749
JBrowse link
G Sphk2 sphingosine kinase 2 involved_in ISO (PMID:16118219)
(MGI:6294167|PMID:16118219)
RGD PMID:16118219 MGI:6294167 NCBI chr 1:96,180,872...96,188,592
Ensembl chr 1:96,180,887...96,188,391
JBrowse link
positive regulation of cytoplasmic translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07030184.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Cnbp CCHC-type zinc finger, nucleic acid binding protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:120,302,768...120,311,694
Ensembl chr 4:120,302,771...120,311,637
JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO
ISS
(PMID:26489465)
GO_REF:0000024
RGD
UniProt
PMID:26489465 GO_REF:0000024 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:16680162), (PMID:21247876), (PMID:22190748) RGD PMID:16680162 PMID:21247876 PMID:22190748 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
JBrowse link
G Eef2 eukaryotic translation elongation factor 2 IMP RGD PMID:19625250 RGD:10401254 NCBI chr 7:8,533,248...8,538,518
Ensembl chr 7:8,533,116...8,559,183
JBrowse link
G Lin28a lin-28 homolog A involved_in ISO (PMID:21247876) RGD PMID:21247876 NCBI chr 5:146,227,119...146,244,122
Ensembl chr 5:146,227,119...146,244,122
JBrowse link
G Pkm pyruvate kinase M1/2 involved_in ISS
ISO
GO_REF:0000024
(MGI:6331015|PMID:28575669)
UniProt
RGD
PMID:28575669 GO_REF:0000024 MGI:6331015 NCBI chr 8:60,057,629...60,079,600
Ensembl chr 8:60,057,402...60,079,599
JBrowse link
G Pkm_v1 pyruvate kinase M1/2, variant 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024
G Pkm_v2 pyruvate kinase M1/2, variant 2 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024
G Zcchc13 zinc finger CCHC-type containing 13 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:68,643,554...68,644,646
Ensembl chr  X:68,643,549...68,665,131
JBrowse link
positive regulation of glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkcd protein kinase C, delta involved_in IEA
ISO
GO_REF:0000107
(PMID:19279011)
Ensembl
RGD
PMID:19279011 GO_REF:0000107 NCBI chr16:5,769,226...5,807,214
Ensembl chr16:5,769,215...5,799,352
JBrowse link
positive regulation of glutathione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISO (MGI:5616326|PMID:14978030) RGD PMID:14978030 MGI:5616326 NCBI chr 4:102,805,495...102,866,914
Ensembl chr 4:102,805,510...102,866,911
JBrowse link
G Nfe2l2 nuclear factor, erythroid 2-like 2 involved_in ISO (MGI:5616326|PMID:14978030) RGD PMID:14978030 MGI:5616326 NCBI chr 3:60,594,239...60,621,785
Ensembl chr 3:60,594,242...60,621,737
JBrowse link
positive regulation of mitochondrial translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qbp complement C1q binding protein involved_in ISS
ISO
GO_REF:0000024
(MGI:5487496|PMID:22904065)
UniProt
RGD
PMID:22904065 GO_REF:0000024 MGI:5487496 NCBI chr10:55,699,954...55,704,605
Ensembl chr10:55,699,954...55,704,649
JBrowse link
G Cdk5rap1 CDK5 regulatory subunit associated protein 1 acts_upstream_of_or_within ISO MGI:5750452 (MGI:5635958|PMID:25738458) RGD PMID:25738458 MGI:5635958 NCBI chr 3:142,838,081...142,872,669
Ensembl chr 3:142,708,028...142,872,677
JBrowse link
G Coa3 cytochrome C oxidase assembly factor 3 involved_in ISO (PMID:23260140) RGD PMID:23260140 NCBI chr10:86,220,192...86,221,173
Ensembl chr10:86,220,194...86,221,178
JBrowse link
G Fastkd2 FAST kinase domains 2 involved_in ISO
IEA
ISS
(PMID:27667664)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:27667664 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:65,166,148...65,188,184
Ensembl chr 9:65,168,228...65,188,174
JBrowse link
G Fastkd3 FAST kinase domains 3 involved_in ISO
ISS
(PMID:27789713)
GO_REF:0000024
RGD
UniProt
PMID:27789713 GO_REF:0000024 NCBI chr 1:34,858,342...34,866,988
Ensembl chr 1:34,858,219...34,866,973
JBrowse link
G Mief1 mitochondrial elongation factor 1 involved_in ISO (PMID:30215512) RGD PMID:30215512 NCBI chr 7:111,786,630...111,802,220
Ensembl chr 7:111,786,709...111,802,220
JBrowse link
G Mpv17l2 MPV17 mitochondrial inner membrane protein like 2 involved_in ISO (PMID:24948607) RGD PMID:24948607 NCBI chr16:18,680,106...18,684,212
Ensembl chr16:18,681,826...18,684,212
JBrowse link
G Mrps27 mitochondrial ribosomal protein S27 involved_in ISO (PMID:22841715) RGD PMID:22841715 NCBI chr 2:30,740,007...30,808,577
Ensembl chr 2:30,740,033...30,808,577
JBrowse link
G Ngrn neugrin, neurite outgrowth associated involved_in ISO
ISS
(PMID:27667664)
GO_REF:0000024
RGD
UniProt
PMID:27667664 GO_REF:0000024 NCBI chr 1:134,213,235...134,219,348
Ensembl chr 1:134,213,456...134,219,339
JBrowse link
G Nsun4 NOP2/Sun RNA methyltransferase 4 involved_in ISO (MGI:5573024|PMID:24516400) RGD PMID:24516400 MGI:5573024 NCBI chr 5:129,511,224...129,532,498
Ensembl chr 5:129,512,307...129,532,423
Ensembl chr 5:129,512,307...129,532,423
JBrowse link
G Rcc1l RCC1 like involved_in ISO (PMID:27667664) RGD PMID:27667664 NCBI chr12:22,543,125...22,574,042
Ensembl chr12:22,543,734...22,574,036
JBrowse link
G Rmnd1 required for meiotic nuclear division 1 homolog involved_in ISO
IBA
(PMID:25604853)
PMID:21873635
RGD PMID:25604853 PMID:21873635 RGD:13792537 NCBI chr 1:40,859,829...40,894,390
Ensembl chr 1:40,859,829...40,894,314
JBrowse link
G Rpusd3 RNA pseudouridine synthase D3 involved_in ISO (PMID:27667664) RGD PMID:27667664 NCBI chr 4:146,553,230...146,562,794
Ensembl chr 4:146,558,562...146,562,794
JBrowse link
G Rpusd4 RNA pseudouridine synthase D4 involved_in ISO
ISS
(PMID:27667664)
GO_REF:0000024
RGD
UniProt
PMID:27667664 GO_REF:0000024 NCBI chr 8:33,617,384...33,626,873
Ensembl chr 8:33,617,379...33,626,873
JBrowse link
G Trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit involved_in ISO
ISS
(PMID:27132592)
GO_REF:0000024
RGD
UniProt
PMID:27132592 GO_REF:0000024 NCBI chr11:44,584,388...44,589,466
Ensembl chr11:44,584,113...44,589,568
JBrowse link
G Trub2 TruB pseudouridine synthase family member 2 involved_in ISO
ISS
(PMID:27667664)
GO_REF:0000024
RGD
UniProt
PMID:27667664 GO_REF:0000024 NCBI chr 3:13,049,220...13,059,836
Ensembl chr 3:13,033,745...13,059,930
JBrowse link
G Uqcc2 ubiquinol-cytochrome c reductase complex assembly factor 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:24385928)
UniProt
RGD
PMID:24385928 GO_REF:0000024 NCBI chr20:5,202,837...5,214,541
Ensembl chr20:5,202,837...5,214,164
JBrowse link
positive regulation of selenocysteine incorporation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpl30 ribosomal protein L30 IDA RGD PMID:15821744 RGD:11038818 NCBI chr 7:65,648,470...65,651,363
Ensembl chr 7:65,645,991...65,651,363
JBrowse link
G Secisbp2 SECIS binding protein 2 IDA RGD PMID:15821744 RGD:11038818 NCBI chr17:13,538,513...13,569,573
Ensembl chr17:13,538,513...13,569,523
JBrowse link
positive regulation of sphingomyelin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:4947032|PMID:21177474)
UniProt
RGD
PMID:21177474 GO_REF:0000024 MGI:4947032 NCBI chr10:104,242,223...104,246,589
Ensembl chr10:104,242,223...104,246,589
JBrowse link
G Prkcd protein kinase C, delta involved_in IEA
ISO
GO_REF:0000107
(PMID:19279011)
Ensembl
RGD
PMID:19279011 GO_REF:0000107 NCBI chr16:5,769,226...5,807,214
Ensembl chr16:5,769,215...5,799,352
JBrowse link
positive regulation of translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07032097.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Abcf1 ATP binding cassette subfamily F member 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:19570978)
UniProt
RGD
PMID:19570978 GO_REF:0000024 NCBI chr20:2,802,519...2,815,433
Ensembl chr20:2,802,488...2,815,433
JBrowse link
G Akap6 A-kinase anchoring protein 6 IMP RGD PMID:16306226 RGD:2312613 NCBI chr 6:70,184,101...70,624,369
Ensembl chr 6:70,184,175...70,619,738
JBrowse link
G Aurka aurora kinase A involved_in ISO (PMID:18614302) RGD PMID:18614302 NCBI chr 3:161,128,309...161,144,524
Ensembl chr 3:161,128,313...161,144,390
JBrowse link
G Barhl2 BarH-like homeobox 2 acts_upstream_of_or_within ISO (MGI:2654373|PMID:12657654) RGD PMID:12657654 MGI:2654373 NCBI chr14:3,340,465...3,345,362
Ensembl chr14:3,340,465...3,345,353
JBrowse link
G Bcl3 BCL3, transcription coactivator involved_in ISO (PMID:16384933) RGD PMID:16384933 NCBI chr 1:79,471,368...79,485,908
Ensembl chr 1:79,471,369...79,485,607
JBrowse link
G Cdk4 cyclin-dependent kinase 4 IMP RGD PMID:12163013 RGD:704385 NCBI chr 7:62,885,647...62,889,562
Ensembl chr 7:62,883,105...62,942,403
JBrowse link
G Cirbp cold inducible RNA binding protein involved_in ISO
ISS
(PMID:11574538)
GO_REF:0000024
RGD
UniProt
PMID:11574538 GO_REF:0000024 NCBI chr 7:9,533,857...9,538,899 JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 involved_in IMP
ISO
(PMID:20662813) RGD PMID:20662813 PMID:19864575 RGD:9685154 NCBI chr 1:135,300,048...135,407,688
Ensembl chr 1:135,300,461...135,409,760
JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (MGI:5300629|PMID:22153079), (MGI:5648736|PMID:26074003), (MGI:5795795|PMID:26074071) RGD PMID:22153079 PMID:26074003 PMID:26074071 MGI:5300629 MGI:5648736 MGI:5795795 NCBI chr 1:234,749,138...234,931,219
Ensembl chr 1:234,751,733...234,931,560
JBrowse link
G Ctif cap binding complex dependent translation initiation factor involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr18:69,056,151...69,327,361
Ensembl chr18:69,059,519...69,327,385
JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 IMP RGD PMID:20439821 RGD:7829726 NCBI chr 6:15,342,312...15,350,886
Ensembl chr 6:15,342,344...15,350,917
JBrowse link
G Ddx39b DExD-box helicase 39B IMP RGD PMID:20116367 RGD:10401141 NCBI chr20:3,547,702...3,585,064
Ensembl chr20:3,572,056...3,584,996
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked involved_in ISO (PMID:18596238), (PMID:22872150), (PMID:28842590) RGD PMID:18596238 PMID:22872150 PMID:28842590 NCBI chr  X:9,479,532...9,493,455
Ensembl chr  X:9,479,532...9,493,168
JBrowse link
G Eef2 eukaryotic translation elongation factor 2 involved_in IDA
ISO
(PMID:23184662) RGD PMID:23184662 PMID:2390990 RGD:10401630 NCBI chr 7:8,533,248...8,538,518
Ensembl chr 7:8,533,116...8,559,183
JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon IDA RGD PMID:20484009 RGD:11041876 NCBI chr11:80,394,433...80,404,468
Ensembl chr11:80,394,433...80,404,419
JBrowse link
G Eif3c eukaryotic translation initiation factor 3, subunit C involved_in ISO UniProtKB:O15371|UniProtKB:P60228|UniProtKB:Q04637 (PMID:24092755) RGD PMID:24092755 NCBI chr 1:181,134,604...181,152,489
Ensembl chr 1:181,134,604...181,152,493
JBrowse link
G Eif3d eukaryotic translation initiation factor 3, subunit D involved_in ISO UniProtKB:P60228|UniProtKB:Q04637|UniProtKB:Q99613 (PMID:24092755) RGD PMID:24092755 NCBI chr 7:109,539,795...109,552,184
Ensembl chr 7:109,539,356...109,552,206
JBrowse link
G Eif3e eukaryotic translation initiation factor 3 subunit E involved_in ISO UniProtKB:O15371|UniProtKB:Q04637|UniProtKB:Q99613 (PMID:24092755) RGD PMID:24092755 NCBI chr 7:75,257,366...75,265,601 JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 involved_in ISO (PMID:18423201) RGD PMID:18423201 NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057
JBrowse link
G Eif4g2 eukaryotic translation initiation factor 4, gamma 2 IMP RGD PMID:22514323 RGD:10755512 NCBI chr 1:165,181,433...165,193,583
Ensembl chr 1:165,181,434...165,193,588
JBrowse link
G Eif4g3 eukaryotic translation initiation factor 4 gamma, 3 acts_upstream_of_or_within ISO MGI:3512906 (MGI:4442992|PMID:20430745) RGD PMID:20430745 MGI:4442992 NCBI chr 5:150,197,410...150,418,363
Ensembl chr 5:150,195,226...150,418,363
JBrowse link
G Eif6 eukaryotic translation initiation factor 6 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5699484|PMID:26383020)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:26383020 GO_REF:0000024 GO_REF:0000107 MGI:5699484 NCBI chr 3:144,325,038...144,331,396
Ensembl chr 3:144,325,036...144,331,401
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 acts_upstream_of_or_within ISO (MGI:5287957|PMID:21613615)
(PMID:21613615)
RGD PMID:21613615 MGI:5287957 NCBI chr12:2,640,936...2,684,787
Ensembl chr12:2,645,061...2,684,784
JBrowse link
G Ep300 E1A binding protein p300 IMP increase in protein:DNA ratio RGD PMID:12477714 RGD:1298794 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:21555369)
UniProt
RGD
PMID:21555369 GO_REF:0000024 NCBI chr10:83,411,197...83,435,078
Ensembl chr10:83,411,313...83,435,078
JBrowse link
G Fmr1 FMRP translational regulator 1 involved_in IEA
ISO
IBA
ISS
GO_REF:0000107
(MGI:3831580|PMID:19166269)
PMID:21873635
GO_REF:0000024
(PMID:19097999), (PMID:19166269)
Ensembl
RGD
UniProt
PMID:19097999 PMID:19166269 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:3831580, RGD:13792537 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:116,884,167...116,937,586
Ensembl chr 2:116,884,248...116,937,590
JBrowse link
G Fxr2 FMR1 autosomal homolog 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:54,350,577...54,370,964
Ensembl chr10:54,350,131...54,370,964
JBrowse link
G Guf1 GTP binding elongation factor GUF1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr14:38,537,953...38,557,331
Ensembl chr14:38,537,953...38,557,331
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISS
ISO
GO_REF:0000024
(PMID:24423872)
UniProt
RGD
PMID:24423872 GO_REF:0000024 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L IMP RGD PMID:19273590 RGD:9999430 NCBI chr 1:84,098,558...84,111,568
Ensembl chr 1:84,100,879...84,111,553
JBrowse link
G Il6 interleukin 6 involved_in ISO (PMID:16732314) RGD PMID:16732314 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
JBrowse link
G Itga2 integrin subunit alpha 2 IMP osteocalcin RGD PMID:10867645 RGD:2307406 NCBI chr 2:46,520,345...46,621,487
Ensembl chr 2:46,523,948...46,621,481
JBrowse link
G Krt17 keratin 17 involved_in ISO (MGI:3625597|PMID:16710422) RGD PMID:16710422 MGI:3625597 NCBI chr10:85,178,673...85,183,392
Ensembl chr10:85,178,675...85,183,392
JBrowse link
G Larp4 La ribonucleoprotein 4 involved_in ISO (PMID:21098120) RGD PMID:21098120 NCBI chr 7:131,104,470...131,152,692 JBrowse link
G Larp4b La ribonucleoprotein 4B involved_in ISO (PMID:20573744) RGD PMID:20573744 NCBI chr17:61,138,709...61,217,423
Ensembl chr17:61,138,709...61,187,960
JBrowse link
G Larp6 La ribonucleoprotein 6, translational regulator involved_in ISO (PMID:21746880) RGD PMID:21746880 NCBI chr 8:61,183,744...61,205,548
Ensembl chr 8:61,184,116...61,205,535
JBrowse link
G Lin28a lin-28 homolog A acts_upstream_of_or_within ISO (MGI:3709663|PMID:17473174) RGD PMID:17473174 MGI:3709663 NCBI chr 5:146,227,119...146,244,122
Ensembl chr 5:146,227,119...146,244,122
JBrowse link
G Mapk1 mitogen activated protein kinase 1 IMP RGD PMID:15027896 RGD:1626220 NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616
JBrowse link
G Mapk3 mitogen activated protein kinase 3 IMP RGD PMID:15027896 RGD:1626220 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
JBrowse link
G Mettl14 methyltransferase like 14 involved_in ISO (PMID:29290617) RGD PMID:29290617 NCBI chr 2:211,530,598...211,546,858
Ensembl chr 2:211,530,602...211,546,821
JBrowse link
G Mettl3 methyltransferase-like 3 involved_in ISO (PMID:30559377) RGD PMID:30559377 NCBI chr15:25,002,505...25,014,097
Ensembl chr15:25,003,172...25,014,041
JBrowse link
G Mettl5 methyltransferase like 5 involved_in ISO (PMID:33357433)
(MGI:6436417|PMID:32217665), (MGI:6505165|PMID:32783360)
RGD PMID:32217665 PMID:32783360 PMID:33357433 MGI:6436417 MGI:6505165 NCBI chr 3:54,625,790...54,638,066
Ensembl chr 3:54,625,793...54,638,039
JBrowse link
G Mif4gd MIF4G domain containing involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:100,847,168...100,852,166 JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in IMP
ISO
(PMID:18762023) RGD PMID:18762023 PMID:15525761 RGD:2307416 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Nat10 N-acetyltransferase 10 involved_in ISO (PMID:30449621) RGD PMID:30449621 NCBI chr 3:90,111,643...90,151,644
Ensembl chr 3:90,111,645...90,149,927
JBrowse link
G Niban1 niban apoptosis regulator 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3716265|PMID:17588536)
UniProt
RGD
PMID:17588536 GO_REF:0000024 MGI:3716265 NCBI chr13:63,674,240...63,827,748
Ensembl chr13:63,674,171...63,827,729
JBrowse link
G Npm1 nucleophosmin 1 involved_in ISO
ISS
(PMID:12882984)
GO_REF:0000024
RGD
UniProt
PMID:12882984 GO_REF:0000024 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
JBrowse link
G Nsun5 NOP2/Sun RNA methyltransferase 5 involved_in ISO (PMID:31428936), (PMID:31722427) RGD PMID:31428936 PMID:31722427 NCBI chr12:21,293,637...21,299,319
Ensembl chr12:21,293,645...21,299,272
JBrowse link
G Otud6b OTU deubiquitinase 6B involved_in ISO (PMID:27864334) RGD PMID:27864334 NCBI chr 5:28,181,992...28,214,486
Ensembl chr 5:28,023,594...28,214,334
JBrowse link
G Paip1 poly(A) binding protein interacting protein 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:51,523,142...51,550,241
Ensembl chr 2:51,522,921...51,550,241
JBrowse link
G Pcif1 phosphorylated CTD interacting factor 1 involved_in ISO (PMID:30467178) RGD PMID:30467178 NCBI chr 3:153,614,147...153,627,079
Ensembl chr 3:153,614,147...153,627,079
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (MGI:5558956|PMID:24553947) RGD PMID:24553947 MGI:5558956 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 involved_in ISO (MGI:3842880|PMID:19114715) RGD PMID:19114715 MGI:3842880 NCBI chr15:45,431,402...45,498,034
Ensembl chr15:45,431,703...45,497,702
JBrowse link
G Pld1 phospholipase D1 involved_in ISO
IEA
(PMID:25361009)
GO_REF:0000107
RGD
Ensembl
PMID:25361009 GO_REF:0000107 NCBI chr 2:110,849,205...111,047,692
Ensembl chr 2:110,893,608...111,047,692
JBrowse link
G Plxnb2 plexin B2 involved_in ISO (PMID:29100074) RGD PMID:29100074 NCBI chr 7:120,232,276...120,258,385
Ensembl chr 7:120,232,331...120,258,330
JBrowse link
G Poldip3 DNA polymerase delta interacting protein 3 involved_in ISO (PMID:18423201) RGD PMID:18423201 NCBI chr 7:114,274,845...114,303,278
Ensembl chr 7:114,275,085...114,303,271
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (MGI:6414739|PMID:32103174) RGD PMID:32103174 MGI:6414739 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
JBrowse link
G Prr16 proline rich 16 involved_in ISO (PMID:24656129) RGD PMID:24656129 NCBI chr18:44,424,348...44,764,796 JBrowse link
G Ptafr platelet-activating factor receptor IMP RGD PMID:8216700 RGD:10043166 NCBI chr 5:144,765,770...144,795,057
Ensembl chr 5:144,765,976...144,795,251
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 IMP RGD PMID:19273590 RGD:9999430 NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta IMP RGD PMID:12890645 RGD:1642632 NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282
JBrowse link
G Pym1 PYM homolog 1, exon junction complex associated factor involved_in ISO (PMID:18026120) RGD PMID:18026120 NCBI chr 7:1,177,746...1,200,899
Ensembl chr 7:1,178,008...1,198,937
JBrowse link
G Rbm3 RNA binding motif protein 3 involved_in IDA PMID:17403028 UniProt PMID:17403028 RGD:8554383 NCBI chr  X:14,348,909...14,352,387
Ensembl chr  X:14,348,910...14,353,580
JBrowse link
G Rbm4 RNA binding motif protein 4 acts_upstream_of_or_within ISO (MGI:3703208|PMID:17264215) RGD PMID:17264215 MGI:3703208 NCBI chr 1:202,078,442...202,087,506
Ensembl chr 1:202,085,279...202,105,380
JBrowse link
G Rbms3 RNA binding motif, single stranded interacting protein 3 acts_upstream_of_or_within ISO (MGI:5501019|PMID:22372950) RGD PMID:22372950 MGI:5501019 NCBI chr 8:116,308,360...117,625,730
Ensembl chr 8:116,309,882...117,625,423
JBrowse link
G Rhoa ras homolog family member A IEP RGD PMID:17562852 RGD:1642806 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO (PMID:16213212) RGD PMID:16213212 NCBI chr10:53,610,836...53,613,966
Ensembl chr10:53,610,421...53,613,966
JBrowse link
G Rpl5 ribosomal protein L5 involved_in ISO (PMID:16213212) RGD PMID:16213212 NCBI chr14:1,843,856...1,850,301
Ensembl chr14:1,843,770...1,850,290
JBrowse link
G Rplp1 ribosomal protein lateral stalk subunit P1 IDA RGD PMID:9242705 RGD:11039477 NCBI chr 8:62,394,008...62,395,341
Ensembl chr 8:62,393,177...62,395,339
JBrowse link
G Rplp2 ribosomal protein lateral stalk subunit P2 IDA RGD PMID:9242705 RGD:11039477 NCBI chr 1:196,546,086...196,548,636
Ensembl chr 1:196,546,352...196,548,645
JBrowse link
G Rps27l ribosomal protein S27-like involved_in ISO (PMID:18056458) RGD PMID:18056458 NCBI chr 8:67,562,483...67,567,418
Ensembl chr 8:67,562,483...67,567,418
JBrowse link
G Rps3a ribosomal protein S3a IDA RGD PMID:8877097 RGD:11040965 NCBI chr 2:171,524,685...171,529,054
Ensembl chr 2:171,524,500...171,529,055
JBrowse link
G Rps4x ribosomal protein S4, X-linked involved_in ISO (PMID:1795030) RGD PMID:1795030 NCBI chr  X:67,298,522...67,302,965
Ensembl chr  X:67,298,525...67,303,019
JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 involved_in ISO (PMID:18423201) RGD PMID:18423201 NCBI chr10:71,323,777...71,367,908
Ensembl chr10:71,323,777...71,367,908
JBrowse link
G Samd4a sterile alpha motif domain containing 4A acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16221671)
GO_REF:0000107
RGD
Ensembl
PMID:16221671 GO_REF:0000107 NCBI chr15:20,135,994...20,352,131
Ensembl chr15:20,134,377...20,348,380
JBrowse link
G Serp1 stress-associated endoplasmic reticulum protein 1 acts_upstream_of_or_within ISO MGI:3652355 (MGI:3619104|PMID:16415102) RGD PMID:16415102 MGI:3619104 NCBI chr 2:142,757,254...142,761,243
Ensembl chr 2:142,757,270...142,761,116
JBrowse link
G Sox4 SRY-box transcription factor 4 involved_in ISO (PMID:19234109) RGD PMID:19234109 NCBI chr17:35,667,809...35,672,515
Ensembl chr17:35,667,537...35,673,665
JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein IMP RGD PMID:17403780 RGD:10059417 NCBI chr 8:89,402,487...89,435,517
Ensembl chr 8:89,402,866...89,435,515
JBrowse link
G Tarbp2 TARBP2 subunit of RISC loading complex acts_upstream_of_or_within ISO MGI:2445673 (MGI:1338603|PMID:10369260) RGD PMID:10369260 MGI:1338603 NCBI chr 7:133,649,118...133,654,306
Ensembl chr 7:133,649,090...133,654,314
JBrowse link
G Thbs1 thrombospondin 1 involved_in ISO (PMID:15700281) RGD PMID:15700281 NCBI chr 3:105,056,286...105,071,445
Ensembl chr 3:105,056,292...105,071,440
JBrowse link
G Ucn urocortin IDA RGD PMID:11087261 RGD:1642796 NCBI chr 6:25,238,120...25,238,950
Ensembl chr 6:25,238,120...25,238,950
JBrowse link
G Upf3a UPF3A, regulator of nonsense mediated mRNA decay involved_in ISO
IBA
(PMID:16601204)
PMID:21873635
RGD PMID:16601204 PMID:21873635 RGD:13792537 NCBI chr16:75,757,442...75,768,478
Ensembl chr16:75,757,441...75,769,345
JBrowse link
G Upf3b UPF3B, regulator of nonsense mediated mRNA decay involved_in IBA
ISO
PMID:21873635
(PMID:16601204)
RGD PMID:16601204 PMID:21873635 RGD:13792537 NCBI chr  X:116,335,308...116,353,332
Ensembl chr  X:116,335,308...116,353,236
JBrowse link
G Vim vimentin involved_in ISO
IEA
(PMID:21746880)
GO_REF:0000107
RGD
Ensembl
PMID:21746880 GO_REF:0000107 NCBI chr17:76,668,701...76,677,186
Ensembl chr17:76,668,647...76,677,187
JBrowse link
G Ythdf1 YTH N(6)-methyladenosine RNA binding protein 1 involved_in ISO (PMID:28106072), (PMID:28106076)
(MGI:6241448|PMID:30401835), (MGI:6281071|PMID:30728504), (MGI:6316558|PMID:30843071)
RGD PMID:28106072 PMID:28106076 PMID:30401835 PMID:30728504 PMID:30843071 MGI:6241448 MGI:6281071 MGI:6316558 NCBI chr 3:168,024,660...168,040,172
Ensembl chr 3:168,024,663...168,040,172
JBrowse link
G Ythdf3 YTH N(6)-methyladenosine RNA binding protein 3 involved_in ISO (PMID:28106072) RGD PMID:28106072 NCBI chr 2:98,350,304...98,384,608
Ensembl chr 2:98,350,588...98,384,606
JBrowse link
G Zcchc4 zinc finger CCHC-type containing 4 involved_in ISS
ISO
GO_REF:0000024
(PMID:30531910), (PMID:31799605)
UniProt
RGD
PMID:30531910 PMID:31799605 GO_REF:0000024 NCBI chr14:58,165,459...58,207,071
Ensembl chr14:58,165,460...58,206,743
JBrowse link
positive regulation of translation in response to endoplasmic reticulum stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx3x DEAD-box helicase 3, X-linked involved_in ISO (PMID:29062139) RGD PMID:29062139 NCBI chr  X:9,479,532...9,493,455
Ensembl chr  X:9,479,532...9,493,168
JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma, 1 involved_in ISO (PMID:29062139) RGD PMID:29062139 NCBI chr11:80,221,919...80,241,958
Ensembl chr11:80,221,919...80,241,941
JBrowse link
G Nck1 NCK adaptor protein 1 involved_in ISO
IBA
(PMID:14676213)
PMID:21873635
UniProtKB:O55033 (MGI:5613478|PMID:14676213)
RGD PMID:14676213 PMID:21873635 MGI:5613478, RGD:13792537 NCBI chr 8:101,018,610...101,079,237
Ensembl chr 8:101,018,702...101,079,300
JBrowse link
G Nck2 NCK adaptor protein 2 involved_in ISO
IBA
UniProtKB:Q99M51 (MGI:5613478|PMID:14676213)
PMID:21873635
RGD PMID:14676213 PMID:21873635 MGI:5613478, RGD:13792537 NCBI chr 9:45,713,979...45,840,330
Ensembl chr 9:45,714,883...45,840,307
JBrowse link
positive regulation of translation in response to stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc35a4 solute carrier family 35, member A4 involved_in ISO (PMID:25621764) RGD PMID:25621764 NCBI chr18:28,280,483...28,284,610
Ensembl chr18:28,279,750...28,284,725
JBrowse link
positive regulation of translation initiation in response to endoplasmic reticulum stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajc3 DnaJ heat shock protein family (Hsp40) member C3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5617428|PMID:25329545)
UniProt
RGD
PMID:25329545 GO_REF:0000024 MGI:5617428 NCBI chr15:96,025,729...96,065,114
Ensembl chr15:96,025,624...96,065,181
JBrowse link
positive regulation of translation, ncRNA-mediated term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago2 argonaute RISC catalytic component 2 involved_in IEA
ISO
GO_REF:0000107
RNAcentral:URS0000134ADC_9606 (PMID:30470799)
Ensembl
RGD
PMID:30470799 GO_REF:0000107 NCBI chr 7:105,018,202...105,105,120
Ensembl chr 7:105,029,120...105,104,974
JBrowse link
positive regulation of translational elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif5a eukaryotic translation initiation factor 5A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:54,640,104...54,644,845
Ensembl chr10:54,640,024...54,644,656
JBrowse link
G Eif5a2 eukaryotic translation initiation factor 5A2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:111,728,587...111,746,087
Ensembl chr 2:111,729,323...111,746,087
JBrowse link
G Rpl12 ribosomal protein L12 IDA RGD PMID:11729183 RGD:11035234 NCBI chr 3:16,264,269...16,266,645
Ensembl chr 3:16,264,251...16,266,642
JBrowse link
G Usp16 ubiquitin specific peptidase 16 involved_in ISS
ISO
GO_REF:0000024
(PMID:20550933)
UniProt
RGD
PMID:20550933 GO_REF:0000024 NCBI chr11:26,681,359...26,711,313
Ensembl chr11:26,681,414...26,710,539
JBrowse link
positive regulation of translational fidelity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07040892.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Cdk5rap1 CDK5 regulatory subunit associated protein 1 acts_upstream_of_or_within ISO NCBI_Gene:945260 (MGI:5635958|PMID:25738458) RGD PMID:25738458 MGI:5635958 NCBI chr 3:142,838,081...142,872,669
Ensembl chr 3:142,708,028...142,872,677
JBrowse link
G Eif2s3 eukaryotic translation initiation factor 2 subunit gamma involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:58,916,513...58,939,923
Ensembl chr  X:58,917,490...58,940,686
JBrowse link
G Eif2s3y eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  Y:869,654...889,341
Ensembl chr  Y:869,689...889,340
JBrowse link
G LOC100364509 ribosomal protein S9-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:58,156,637...58,157,376
Ensembl chr16:58,156,236...58,166,965
JBrowse link
G RGD1566136 similar to 40S ribosomal protein S9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:105,572,159...105,572,766
Ensembl chr  X:105,572,167...105,572,751
JBrowse link
G Rps9 ribosomal protein S9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Rps9l1 ribosomal protein S9-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:65,511,723...65,515,121 JBrowse link
positive regulation of translational initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07027799.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Boll boule homolog, RNA binding protein involved_in ISO
IBA
(PMID:16001084)
PMID:21873635
RGD PMID:16001084 PMID:21873635 RGD:13792537 NCBI chr 9:56,734,890...56,859,917
Ensembl chr 9:56,733,584...56,859,916
JBrowse link
G Dazl deleted in azoospermia-like involved_in ISO
IBA
(PMID:16001084)
(MGI:3689792|PMID:16001084)
PMID:21873635
RGD PMID:16001084 PMID:21873635 MGI:3689792, RGD:13792537 NCBI chr 9:10,695,572...10,712,443
Ensembl chr 9:10,695,592...10,712,323
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked involved_in ISO (PMID:20837705) RGD PMID:20837705 NCBI chr  X:9,479,532...9,493,455
Ensembl chr  X:9,479,532...9,493,168
JBrowse link
G Dhx29 DExH-box helicase 29 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 2:44,560,653...44,611,450
Ensembl chr 2:44,560,714...44,611,445
JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:80,394,433...80,404,468
Ensembl chr11:80,394,433...80,404,419
JBrowse link
G Habp4 hyaluronan binding protein 4 involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:21771594)
UniProt
RGD
PMID:21771594 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr17:934,931...957,604
Ensembl chr17:935,654...957,565
JBrowse link
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:21613532)
UniProt
RGD
PMID:21613532 GO_REF:0000024 NCBI chr 5:142,051,844...142,089,175
Ensembl chr 5:142,063,570...142,089,180
JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:29244122) RGD PMID:29244122 NCBI chr10:42,191,378...42,246,361
Ensembl chr10:42,191,325...42,243,371
JBrowse link
G Polr2d RNA polymerase II subunit D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:23,418,097...23,425,228
Ensembl chr18:23,418,097...23,425,228
JBrowse link
G Polr2g RNA polymerase II subunit G involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:205,689,160...205,692,537
Ensembl chr 1:205,689,160...205,692,686
JBrowse link
G RGD1561897 similar to Serine/threonine-protein kinase Kist (Kinase interacting with stathmin) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:42,241,640...42,243,666 JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 involved_in ISO (PMID:16763566) RGD PMID:16763566 NCBI chr10:71,323,777...71,367,908
Ensembl chr10:71,323,777...71,367,908
JBrowse link
G Rps6kb2 ribosomal protein S6 kinase B2 involved_in ISO (PMID:16763566) RGD PMID:16763566 NCBI chr 1:201,451,265...201,458,096
Ensembl chr 1:201,451,265...201,458,078
JBrowse link
G Uhmk1 U2AF homology motif kinase 1 involved_in IBA
ISO
PMID:21873635
(MGI:3835232|PMID:19015237)
RGD PMID:19015237 PMID:21873635 MGI:3835232, RGD:13792537 NCBI chr13:82,396,646...82,416,292
Ensembl chr13:82,401,187...82,416,292
JBrowse link
G Ythdf1 YTH N(6)-methyladenosine RNA binding protein 1 NOT|involved_in ISO (PMID:32492408)
(MGI:6490006|PMID:32943573)
(PMID:26046440)
RGD PMID:26046440 PMID:32492408 PMID:32943573 MGI:6490006 NCBI chr 3:168,024,660...168,040,172
Ensembl chr 3:168,024,663...168,040,172
JBrowse link
G Ythdf2 YTH N(6)-methyladenosine RNA binding protein 2 NOT|involved_in ISO (PMID:32492408)
(MGI:6490006|PMID:32943573)
RGD PMID:32492408 PMID:32943573 MGI:6490006 NCBI chr 5:144,381,426...144,407,126
Ensembl chr 5:144,381,431...144,408,144
JBrowse link
G Ythdf3 YTH N(6)-methyladenosine RNA binding protein 3 NOT|involved_in ISO (PMID:32492408)
(MGI:6490006|PMID:32943573)
(PMID:28106076)
RGD PMID:28106076 PMID:32492408 PMID:32943573 MGI:6490006 NCBI chr 2:98,350,304...98,384,608
Ensembl chr 2:98,350,588...98,384,606
JBrowse link
positive regulation of translational initiation by iron term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rxra retinoid X receptor alpha acts_upstream_of_or_within ISO MGI:1201686 (MGI:5538466|PMID:23775127) RGD PMID:23775127 MGI:5538466 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712
JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within ISO (MGI:2152007|PMID:11588035) RGD PMID:11588035 MGI:2152007 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
positive regulation of translational initiation in response to starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:2149467|PMID:10655230), (MGI:3589053|PMID:16121183)
UniProt
RGD
PMID:10655230 PMID:16121183 GO_REF:0000024 MGI:2149467 MGI:3589053 NCBI chr 3:105,356,261...105,441,630
Ensembl chr 3:105,356,261...105,441,630
JBrowse link
G Impact impact RWD domain protein involved_in ISS
ISO
GO_REF:0000024
(MGI:5494763|PMID:23447528)
UniProt
RGD
PMID:23447528 GO_REF:0000024 MGI:5494763 NCBI chr18:4,108,872...4,147,571
Ensembl chr18:4,108,853...4,147,569
JBrowse link
positive regulation of translational termination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif5a eukaryotic translation initiation factor 5A involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:54,640,104...54,644,845
Ensembl chr10:54,640,024...54,644,656
JBrowse link
G Eif5a2 eukaryotic translation initiation factor 5A2 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 2:111,728,587...111,746,087
Ensembl chr 2:111,729,323...111,746,087
JBrowse link
G Jmjd4 jumonji domain containing 4 involved_in ISO (PMID:24486019) RGD PMID:24486019 NCBI chr10:44,234,465...44,242,754
Ensembl chr10:44,234,549...44,240,065
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    cellular process 18340
      cellular metabolic process 10717
        positive regulation of cellular metabolic process 3326
          positive regulation of cellular amide metabolic process 183
            positive regulation of amyloid-beta formation 20
            positive regulation of antimicrobial peptide biosynthetic process + 1
            positive regulation of brevianamide F biosynthetic process 0
            positive regulation of butyryl-CoA biosynthetic process from acetyl-CoA 0
            positive regulation of butyryl-CoA catabolic process to butanol 0
            positive regulation of butyryl-CoA catabolic process to butyrate 0
            positive regulation of cellular amide catabolic process + 0
            positive regulation of ceramide biosynthetic process + 7
            positive regulation of emericellamide biosynthetic process + 0
            positive regulation of gliotoxin biosynthetic process 0
            positive regulation of glucosylceramide catabolic process 1
            positive regulation of glutathione biosynthetic process 2
            positive regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway 0
            positive regulation of penicillin metabolic process + 0
            positive regulation of peptide hormone processing 0
            positive regulation of pseurotin A biosynthetic process 0
            positive regulation of siderophore biosynthetic process + 0
            positive regulation of sphingomyelin catabolic process 2
            positive regulation of tensidol A biosynthetic process 0
            positive regulation of tensidol B biosynthetic process 0
            positive regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA 0
            positive regulation of translation + 154
Path 2
Term Annotations click to browse term
  biological_process 19492
    biological regulation 13513
      regulation of biological process 12769
        regulation of cellular process 12228
          regulation of cellular metabolic process 5891
            regulation of cellular amide metabolic process 466
              positive regulation of cellular amide metabolic process 183
                positive regulation of amyloid-beta formation 20
                positive regulation of antimicrobial peptide biosynthetic process + 1
                positive regulation of brevianamide F biosynthetic process 0
                positive regulation of butyryl-CoA biosynthetic process from acetyl-CoA 0
                positive regulation of butyryl-CoA catabolic process to butanol 0
                positive regulation of butyryl-CoA catabolic process to butyrate 0
                positive regulation of cellular amide catabolic process + 0
                positive regulation of ceramide biosynthetic process + 7
                positive regulation of emericellamide biosynthetic process + 0
                positive regulation of gliotoxin biosynthetic process 0
                positive regulation of glucosylceramide catabolic process 1
                positive regulation of glutathione biosynthetic process 2
                positive regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway 0
                positive regulation of penicillin metabolic process + 0
                positive regulation of peptide hormone processing 0
                positive regulation of pseurotin A biosynthetic process 0
                positive regulation of siderophore biosynthetic process + 0
                positive regulation of sphingomyelin catabolic process 2
                positive regulation of tensidol A biosynthetic process 0
                positive regulation of tensidol B biosynthetic process 0
                positive regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA 0
                positive regulation of translation + 154
paths to the root