Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:cellular response to zinc ion starvation
go back to main search page
Accession:GO:0034224 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of zinc ions.
Synonyms:exact_synonym: cellular response to zinc ion limitation;   cellular response to zinc starvation


show annotations for term's descendants           Sort by:
cellular response to zinc ion starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACP5 acid phosphatase 5, tartrate resistant ISO RGD PMID:21893222 RGD:151667428 NCBI chr19:11,120,451...11,125,167
Ensembl chr19:11,832,575...11,835,203 		JBrowse link
G BGLAP bone gamma-carboxyglutamate protein ISO RGD PMID:21893222 RGD:151667428 NCBI chr 1:131,583,789...131,586,459
Ensembl chr 1:135,413,871...135,416,432 		JBrowse link
G CTNNB1 catenin beta 1 ISO RGD PMID:21893222 RGD:151667428 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030 		JBrowse link
G CTSK cathepsin K ISO RGD PMID:21893222 RGD:151667428 NCBI chr 1:126,146,555...126,158,662
Ensembl chr 1:129,795,966...129,808,316 		JBrowse link
G DLX5 distal-less homeobox 5 ISO RGD PMID:21893222 RGD:151667428 NCBI chr 7:88,972,066...88,977,588
Ensembl chr 7:102,555,267...102,561,186 		JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:21893222 RGD:151667428 NCBI chr14:55,832,570...55,835,984
Ensembl chr14:74,676,316...74,679,766 		JBrowse link
G IGF1 insulin like growth factor 1 ISO RGD PMID:21893222 RGD:151667428 NCBI chr12:99,986,887...100,066,773
Ensembl chr12:103,385,911...103,462,177 		JBrowse link
G IGF1R insulin like growth factor 1 receptor ISO RGD PMID:21893222 RGD:151667428 NCBI chr15:77,332,926...77,648,474
Ensembl chr15:96,535,164...96,832,974 		JBrowse link
G INSR insulin receptor ISO RGD PMID:21893222 RGD:151667428 NCBI chr19:6,393,407...6,578,234
Ensembl chr19:7,260,246...7,414,889 		JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:21893222 RGD:151667428 NCBI chr 1:58,042,794...58,045,536 JBrowse link
G MITF melanocyte inducing transcription factor ISO RGD PMID:21893222 RGD:151667428 NCBI chr 3:69,674,064...69,902,078
Ensembl chr 3:71,037,665...71,265,445 		JBrowse link
G RUNX2 RUNX family transcription factor 2 ISO RGD PMID:21893222 RGD:151667428 NCBI chr 6:45,003,962...45,133,148
Ensembl chr 6:46,189,432...46,524,389 		JBrowse link
G SLC39A4 solute carrier family 39 member 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3522410|PMID:15358787) MGI
Ensembl		 PMID:15358787 GO_REF:0000107 MGI:3522410 NCBI chr 8:141,178,792...141,183,565
Ensembl chr 8:144,169,089...144,173,517 		JBrowse link
G SLC39A5 solute carrier family 39 member 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3522410|PMID:15358787) MGI
Ensembl		 PMID:15358787 GO_REF:0000107 MGI:3522410 NCBI chr12:32,677,330...32,685,316
Ensembl chr12:32,929,033...32,936,158 		JBrowse link
G SP1 Sp1 transcription factor ISO RGD PMID:21893222 RGD:151667428 NCBI chr12:35,338,492...35,374,462
Ensembl chr12:36,127,681...36,158,356 		JBrowse link
G SP7 Sp7 transcription factor ISO RGD PMID:21893222 RGD:151667428 NCBI chr12:35,409,055...35,427,871
Ensembl chr12:36,199,673...36,209,494 		JBrowse link
G TNFRSF11A TNF receptor superfamily member 11a ISO RGD PMID:21893222 RGD:151667428 NCBI chr18:55,695,394...55,761,307
Ensembl chr18:59,034,770...59,075,044 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15372
    response to stimulus 7944
      response to stress 3638
        cellular response to stress 1872
          cellular response to starvation 186
            cellular response to zinc ion starvation 17
Path 2
Term Annotations click to browse term
  biological_process 15372
    response to stimulus 7944
      response to external stimulus 2805
        response to extracellular stimulus 750
          response to nutrient levels 719
            response to starvation 245
              cellular response to starvation 186
                cellular response to zinc ion starvation 17
paths to the root