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ONTOLOGY REPORT - ANNOTATIONS


Term:ribonucleoside bisphosphate catabolic process
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Accession:GO:0034031 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a ribonucleoside bisphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.
Synonyms:exact_synonym: ribonucleoside bisphosphate breakdown;   ribonucleoside bisphosphate catabolism;   ribonucleoside bisphosphate degradation


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acetyl-CoA catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 ISO (PMID:17371050) RGD PMID:17371050 NCBI chr 8:58,166,990...58,195,884
Ensembl chr 8:58,166,990...58,195,884
JBrowse link
G Nudt7 nudix hydrolase 7 ISO (MGI:MGI:2137102|PMID:11415433), (MGI:MGI:6450264|PMID:18799520) RGD PMID:11415433, PMID:18799520 MGI:MGI:2137102, MGI:MGI:6450264 NCBI chr19:46,455,745...46,470,070
Ensembl chr19:46,455,761...46,482,050
JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix hydrolase 7 ISO (MGI:MGI:6450264|PMID:18799520) RGD PMID:18799520 MGI:MGI:6450264 NCBI chr19:46,455,745...46,470,070
Ensembl chr19:46,455,761...46,482,050
JBrowse link
coenzyme A catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix hydrolase 7 IBA
ISO
PMID:21873635
(MGI:MGI:2137102|PMID:11415433), (MGI:MGI:6450264|PMID:18799520)
RGD PMID:11415433, PMID:18799520, PMID:21873635 MGI:MGI:2137102, MGI:MGI:6450264, RGD:13792537 NCBI chr19:46,455,745...46,470,070
Ensembl chr19:46,455,761...46,482,050
JBrowse link
long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 ISO (PMID:10578051) RGD PMID:10578051 NCBI chr 5:169,357,582...169,450,215
Ensembl chr 5:169,357,517...169,450,219
JBrowse link
malonyl-CoA catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlycd malonyl-CoA decarboxylase ISO
ISS
IBA
(MGI:MGI:5501374|PMID:23746352)
GO_REF:0000024
(PMID:10417274), (PMID:10455107), (PMID:15003260)
PMID:21873635
RGD
UniProt
PMID:10417274, PMID:10455107, PMID:15003260, PMID:23746352, PMID:21873635 GO_REF:0000024, MGI:MGI:5501374, RGD:13792537 NCBI chr19:52,032,950...52,048,773
Ensembl chr19:52,032,886...52,048,753
JBrowse link
medium-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 ISO (PMID:10578051) RGD PMID:10578051 NCBI chr 5:169,357,582...169,450,215
Ensembl chr 5:169,357,517...169,450,219
JBrowse link
G Nudt7 nudix hydrolase 7 ISO (MGI:MGI:6450264|PMID:18799520) RGD PMID:18799520 MGI:MGI:6450264 NCBI chr19:46,455,745...46,470,070
Ensembl chr19:46,455,761...46,482,050
JBrowse link
propionyl-CoA catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix hydrolase 7 ISO (MGI:MGI:6450264|PMID:18799520) RGD PMID:18799520 MGI:MGI:6450264 NCBI chr19:46,455,745...46,470,070
Ensembl chr19:46,455,761...46,482,050
JBrowse link
very long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 ISO
ISS
(PMID:23671276)
GO_REF:0000024
RGD
UniProt
PMID:23671276 GO_REF:0000024 NCBI chr  X:157,073,860...157,095,652
Ensembl chr  X:157,072,736...157,095,274
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      organic substance metabolic process 11636
        organophosphate metabolic process 971
          nucleoside phosphate metabolic process 510
            nucleoside bisphosphate metabolic process 110
              nucleoside bisphosphate catabolic process 5
                ribonucleoside bisphosphate catabolic process 5
                  2-hydroxybenzoyl-CoA catabolic process 0
                  acetyl-CoA catabolic process + 2
                  benzoyl-CoA catabolic process 0
                  coenzyme A catabolic process 1
                  fatty-acyl-CoA catabolic process + 3
                  malonyl-CoA catabolic process 1
                  purine ribonucleoside bisphosphate catabolic process + 0
                  succinyl-CoA catabolic process 0
Path 2
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      cellular metabolic process 11065
        cellular aromatic compound metabolic process 5708
          nucleobase-containing compound metabolic process 5483
            nucleobase-containing small molecule metabolic process 590
              nucleoside phosphate metabolic process 510
                nucleoside bisphosphate metabolic process 110
                  nucleoside bisphosphate catabolic process 5
                    ribonucleoside bisphosphate catabolic process 5
                      2-hydroxybenzoyl-CoA catabolic process 0
                      acetyl-CoA catabolic process + 2
                      benzoyl-CoA catabolic process 0
                      coenzyme A catabolic process 1
                      fatty-acyl-CoA catabolic process + 3
                      malonyl-CoA catabolic process 1
                      purine ribonucleoside bisphosphate catabolic process + 0
                      succinyl-CoA catabolic process 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.