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ONTOLOGY REPORT - ANNOTATIONS


Term:ribonucleoside bisphosphate catabolic process
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Accession:GO:0034031 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a ribonucleoside bisphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.
Synonyms:exact_synonym: ribonucleoside bisphosphate breakdown;   ribonucleoside bisphosphate catabolism;   ribonucleoside bisphosphate degradation


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acetyl-CoA catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-Coenzyme A acetyltransferase 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 9:53,580,522...53,610,350
Ensembl chr 9:53,580,522...53,610,382
JBrowse link
G Nudt7 nudix (nucleoside diphosphate linked moiety X)-type motif 7 IDA (MGI:MGI:2137102|PMID:11415433), (MGI:MGI:6450264|PMID:18799520) UniProt PMID:11415433, PMID:18799520 MGI:MGI:2137102, MGI:MGI:6450264 NCBI chr 8:114,133,574...114,154,731
Ensembl chr 8:114,133,557...114,154,739
JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix (nucleoside diphosphate linked moiety X)-type motif 7 IDA (MGI:MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:MGI:6450264 NCBI chr 8:114,133,574...114,154,731
Ensembl chr 8:114,133,557...114,154,739
JBrowse link
coenzyme A catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix (nucleoside diphosphate linked moiety X)-type motif 7 IBA
IDA
(MGI:MGI:6201960|PMID:21873635)
(MGI:MGI:2137102|PMID:11415433), (MGI:MGI:6450264|PMID:18799520)
GO_Central
MGI
PMID:11415433, PMID:18799520, PMID:21873635 MGI:MGI:2137102, MGI:MGI:6201960, MGI:MGI:6450264 NCBI chr 8:114,133,574...114,154,731
Ensembl chr 8:114,133,557...114,154,739
JBrowse link
long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:152,178,100...152,271,855
Ensembl chr 4:152,178,134...152,271,855
JBrowse link
malonyl-CoA catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlycd malonyl-CoA decarboxylase IDA
ISO
IBA
(MGI:MGI:5501374|PMID:23746352)
(MGI:MGI:6201960|PMID:21873635)
UniProtKB
MGI
GO_Central
PMID:21873635, PMID:23746352 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5501374, MGI:MGI:6201960 NCBI chr 8:119,394,852...119,421,838
Ensembl chr 8:119,394,878...119,411,102
JBrowse link
medium-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:152,178,100...152,271,855
Ensembl chr 4:152,178,134...152,271,855
JBrowse link
G Nudt7 nudix (nucleoside diphosphate linked moiety X)-type motif 7 IDA (MGI:MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:MGI:6450264 NCBI chr 8:114,133,574...114,154,731
Ensembl chr 8:114,133,557...114,154,739
JBrowse link
propionyl-CoA catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix (nucleoside diphosphate linked moiety X)-type motif 7 IDA (MGI:MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:MGI:6450264 NCBI chr 8:114,133,574...114,154,731
Ensembl chr 8:114,133,557...114,154,739
JBrowse link
very long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP-binding cassette, sub-family D (ALD), member 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr  X:73,716,597...73,738,534
Ensembl chr  X:73,716,597...73,738,534
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23360
    metabolic process 11269
      organic substance metabolic process 10739
        organophosphate metabolic process 888
          nucleoside phosphate metabolic process 447
            nucleoside bisphosphate metabolic process 102
              nucleoside bisphosphate catabolic process 5
                ribonucleoside bisphosphate catabolic process 5
                  2-hydroxybenzoyl-CoA catabolic process 0
                  acetyl-CoA catabolic process + 2
                  benzoyl-CoA catabolic process 0
                  coenzyme A catabolic process 1
                  fatty-acyl-CoA catabolic process + 3
                  malonyl-CoA catabolic process 1
                  purine ribonucleoside bisphosphate catabolic process + 0
                  succinyl-CoA catabolic process 0
Path 2
Term Annotations click to browse term
  biological_process 23360
    metabolic process 11269
      cellular metabolic process 10049
        cellular aromatic compound metabolic process 5413
          nucleobase-containing compound metabolic process 5182
            nucleobase-containing small molecule metabolic process 518
              nucleoside phosphate metabolic process 447
                nucleoside bisphosphate metabolic process 102
                  nucleoside bisphosphate catabolic process 5
                    ribonucleoside bisphosphate catabolic process 5
                      2-hydroxybenzoyl-CoA catabolic process 0
                      acetyl-CoA catabolic process + 2
                      benzoyl-CoA catabolic process 0
                      coenzyme A catabolic process 1
                      fatty-acyl-CoA catabolic process + 3
                      malonyl-CoA catabolic process 1
                      purine ribonucleoside bisphosphate catabolic process + 0
                      succinyl-CoA catabolic process 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.