Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:L-lysine catabolic process to acetyl-CoA via L-pipecolate
go back to main search page
Accession:GO:0033514 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including acetyl-CoA, via the intermediate L-pipecolate.
Synonyms:exact_synonym: L-lysine breakdown to acetyl-CoA via L-pipecolate;   L-lysine degradation to acetyl-CoA via L-pipecolate
 xref: MetaCyc:PWY-5283

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pipox pipecolic acid and sarcosine oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:5,218,097...5,252,579
Ensembl chrNW_004936538:5,228,418...5,242,668 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15022
    metabolic process 9415
      catabolic process 2136
        amide catabolic process 21
          L-lysine catabolic process to acetyl-CoA 3
            L-lysine catabolic process to acetyl-CoA via L-pipecolate 1
Path 2
Term Annotations click to browse term
  biological_process 15022
    metabolic process 9415
      cellular metabolic process 5846
        cellular aromatic compound metabolic process 2477
          nucleobase-containing compound metabolic process 2259
            nucleobase-containing small molecule metabolic process 466
              nucleoside phosphate metabolic process 412
                nucleotide metabolic process 406
                  purine nucleotide metabolic process 348
                    purine ribonucleotide metabolic process 269
                      acyl-CoA metabolic process 79
                        acetyl-CoA metabolic process 37
                          L-lysine catabolic process to acetyl-CoA 3
                            L-lysine catabolic process to acetyl-CoA via L-pipecolate 1
paths to the root