ONTOLOGY REPORT - ANNOTATIONS
Term: chromatoid body
Accession: GO:0033391
browse the term
Definition: A ribonucleoprotein complex found in the cytoplasm of male germ cells, composed of exceedingly thin filaments that are consolidated into a compact mass or into dense strands of varying thickness that branch to form an irregular network. Contains mRNAs, miRNAs, and protein components involved in miRNA processing (such as Argonaute proteins and the endonuclease Dicer) and in RNA decay (such as the decapping enzyme DCP1a and GW182).
G
Ago2
argonaute RISC catalytic component 2
IDA
MMO:0000663
RGD
PMID:27029769
RGD:11529670
NCBI chr 7:105,018,202...105,105,118
Ensembl chr 7:105,029,120...105,104,974
G
Bmal1
basic helix-loop-helix ARNT like 1
located_in
ISS ISO
GO_REF:0000024 (MGI:5447260|PMID:22900038)
UniProt RGD
PMID:22900038
GO_REF:0000024 MGI:5447260
NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
G
Clock
clock circadian regulator
located_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5447260|PMID:22900038)
UniProt Ensembl RGD
PMID:22900038
GO_REF:0000024 GO_REF:0000107 MGI:5447260
NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
G
Ddx25
DEAD-box helicase 25
located_in
ISS ISO
GO_REF:0000024 (MGI:3040720|PMID:15096601), (MGI:6453518|PMID:32665638)
UniProt RGD
PMID:15096601 PMID:32665638
GO_REF:0000024 MGI:3040720 MGI:6453518
NCBI chr 8:33,894,224...33,910,377
Ensembl chr 8:33,894,232...33,921,764
G
Ddx4
DEAD-box helicase 4
located_in
IDA ISO
(MGI:1858321|PMID:10781947), (MGI:5446593|PMID:22792342) (PMID:10781947)
RGD
PMID:10781947 PMID:22792342 PMID:24141902
MGI:1858321 MGI:5446593 , RGD:10755411
NCBI chr 2:44,227,946...44,282,867
Ensembl chr 2:44,227,946...44,282,723
G
Ddx6
DEAD-box helicase 6
IDA
RGD
PMID:24141902
RGD:10755411
NCBI chr 8:44,931,127...44,967,773
Ensembl chr 8:44,931,974...44,964,405
G
Eif4e
eukaryotic translation initiation factor 4E
located_in
ISO
(MGI:5446593|PMID:22792342)
RGD
PMID:22792342
MGI:5446593
NCBI chr 2:227,066,519...227,099,261
Ensembl chr 2:227,066,673...227,098,683
G
Mael
maelstrom spermatogenic transposon silencer
located_in
ISO
(MGI:3655410|PMID:16787967)
RGD
PMID:16787967
MGI:3655410
NCBI chr13:78,457,073...78,496,657
Ensembl chr13:78,457,073...78,496,657
G
Marcks
myristoylated alanine rich protein kinase C substrate
IDA
RGD
PMID:21764106
RGD:9685331
NCBI chr20:40,685,315...40,691,012
Ensembl chr20:40,685,315...40,691,012
G
Nsun2
NOP2/Sun RNA methyltransferase 2
part_of
ISO
(MGI:5525987|PMID:23401851)
RGD
PMID:23401851
MGI:5525987
NCBI chr 1:33,662,139...33,685,887
Ensembl chr 1:33,662,139...33,685,862
G
Piwil1
piwi-like RNA-mediated gene silencing 1
located_in
ISO
(MGI:3640041|PMID:16787948), (MGI:3663970|PMID:16938833), (MGI:5049827|PMID:21539824)
RGD
PMID:16787948 PMID:16938833 PMID:21539824
MGI:3640041 MGI:3663970 MGI:5049827
NCBI chr12:27,949,743...27,970,645
Ensembl chr12:27,949,744...27,970,580
G
Piwil2
piwi-like RNA-mediated gene silencing 2
located_in
ISO
(MGI:3842880|PMID:19114715), (MGI:5049827|PMID:21539824)
RGD
PMID:19114715 PMID:21539824
MGI:3842880 MGI:5049827
NCBI chr15:45,431,402...45,498,034
Ensembl chr15:45,431,703...45,497,702
G
Slc25a54
solute carrier family 25, member 54
located_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 2:196,711,573...196,758,196
Ensembl chr 2:196,711,637...196,756,827
G
Smg1
SMG1, nonsense mediated mRNA decay associated PI3K related kinase
located_in
ISO
(MGI:6453518|PMID:32665638)
RGD
PMID:32665638
MGI:6453518
NCBI chr 1:172,441,892...172,543,667
Ensembl chr 1:172,444,936...172,543,698
G
Tdrd1
tudor domain containing 1
located_in
ISO
(MGI:3695528|PMID:17141210)
RGD
PMID:17141210
MGI:3695528
NCBI chr 1:255,871,939...255,919,222
Ensembl chr 1:255,875,887...255,915,871
G
Tdrd5
tudor domain containing 5
located_in
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (MGI:4946318|PMID:21383078)
Ensembl UniProt RGD
PMID:21383078
GO_REF:0000024 GO_REF:0000107 MGI:4946318
NCBI chr13:68,394,180...68,447,745
Ensembl chr13:68,394,061...68,441,319
G
Tdrd6
tudor domain containing 6
located_in
ISO
(MGI:3847167|PMID:19345099)
RGD
PMID:19345099
MGI:3847167
NCBI chr 9:17,344,033...17,359,348
Ensembl chr 9:17,344,026...17,359,344
G
Tdrd7
tudor domain containing 7
located_in
ISO
(MGI:3695528|PMID:17141210)
RGD
PMID:17141210
MGI:3695528
NCBI chr 5:60,238,742...60,312,548
Ensembl chr 5:60,238,678...60,312,544
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all