Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:putrescine biosynthetic process from arginine
go back to main search page
Accession:GO:0033388 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane, from other compounds, including arginine.
Synonyms:exact_synonym: putrescine anabolism from arginine;   putrescine biosynthesis from arginine;   putrescine formation from arginine;   putrescine synthesis from arginine


show annotations for term's descendants           Sort by:
putrescine biosynthetic process from arginine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPB1 beta-ureidopropionase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:28,194,968...28,225,977
Ensembl chr26:28,195,081...28,225,567 		JBrowse link
putrescine biosynthetic process from arginine, using agmatinase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGMAT agmatinase (putative) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:81,980,959...81,990,377
Ensembl chr 2:81,981,376...81,989,916 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17878
    metabolic process 10933
      organic substance metabolic process 10478
        amino acid metabolic process 304
          alpha-amino acid metabolic process 222
            arginine metabolic process 22
              putrescine biosynthetic process from arginine 2
                putrescine biosynthetic process from arginine via N-carbamoylputrescine 0
                putrescine biosynthetic process from arginine, using agmatinase 1
Path 2
Term Annotations click to browse term
  biological_process 17878
    metabolic process 10933
      organic substance metabolic process 10478
        organonitrogen compound metabolic process 5385
          amine metabolic process 131
            amine biosynthetic process 44
              biogenic amine biosynthetic process 44
                polyamine biosynthetic process 14
                  putrescine biosynthetic process 6
                    putrescine biosynthetic process from arginine 2
                      putrescine biosynthetic process from arginine via N-carbamoylputrescine 0
                      putrescine biosynthetic process from arginine, using agmatinase 1
paths to the root