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ONTOLOGY REPORT - ANNOTATIONS

Term:T-tubule organization
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Accession:GO:0033292 term browser browse the term
Definition:A process that is carried out at the cellular level that results in the assembly, arrangement of constituent parts, or disassembly of the T-tubule. A T-tubule is an invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril.
Synonyms:exact_synonym: T-tubule organisation;   transverse tubule organization
 related_synonym: T-tubule organization and biogenesis


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T-tubule organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 acts_upstream_of_or_within
involved_in		 ISO MGI:2179754 (PMID:20610380)
(PMID:16292983)		 RGD PMID:16292983 PMID:20610380 NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923 		JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4415164 (PMID:22355118)		 Ensembl
RGD		 PMID:22355118 GO_REF:0000107 NCBI chr12:34,072,710...34,122,142
Ensembl chr12:34,072,683...34,122,101 		JBrowse link
G Bin1 bridging integrator 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:24755653)
(PMID:24836577)		 Ensembl
RGD		 PMID:24755653 PMID:24836577 GO_REF:0000107 NCBI chr18:24,009,731...24,067,267
Ensembl chr18:24,009,653...24,067,263 		JBrowse link
G Csrp3 cysteine and glycine rich protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1328311 (PMID:28706255)		 Ensembl
RGD		 PMID:28706255 GO_REF:0000107 NCBI chr 1:98,528,067...98,546,647
Ensembl chr 1:98,528,068...98,546,653 		JBrowse link
G Dysf dysferlin acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:1919192|MGI:3055150 (PMID:24177035), (PMID:24302765)
GO_REF:0000033		 RGD
GO_Central		 PMID:24177035 PMID:24302765 GO_REF:0000033 NCBI chr 4:116,490,877...116,690,709
Ensembl chr 4:116,490,616...116,690,709 		JBrowse link
G Myof myoferlin acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:1349385 (PMID:24177035)
GO_REF:0000033		 RGD
GO_Central		 PMID:24177035 GO_REF:0000033 NCBI chr 1:235,673,666...235,822,413
Ensembl chr 1:235,673,666...235,822,334 		JBrowse link
G Sypl2 synaptophysin-like 2 acts_upstream_of_or_within ISO MGI:1330824 (PMID:28706255) RGD PMID:28706255 NCBI chr 2:195,849,062...195,863,794
Ensembl chr 2:195,849,062...195,863,794 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20075
    developmental process 7069
      cellular developmental process 4781
        cell development 3326
          muscle cell development 245
            T-tubule organization 7
Path 2
Term Annotations click to browse term
  biological_process 20075
    cellular process 19154
      cellular component organization or biogenesis 7178
        cellular component organization 6923
          endomembrane system organization 578
            plasma membrane organization 174
              T-tubule organization 7
paths to the root