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ONTOLOGY REPORT - ANNOTATIONS


Term:T-tubule organization
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Accession:GO:0033292 term browser browse the term
Definition:A process that is carried out at the cellular level that results in the assembly, arrangement of constituent parts, or disassembly of the T-tubule. A T-tubule is an invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril.
Synonyms:exact_synonym: T-tubule organisation;   transverse tubule organization
 related_synonym: T-tubule organization and biogenesis


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T-tubule organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in
acts_upstream_of_or_within
ISO (MGI:3610760|PMID:16292983)
MGI:2179754 (MGI:4844023|PMID:20610380)
RGD PMID:16292983 PMID:20610380 MGI:3610760 MGI:4844023 NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923
JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:4415164 (MGI:5314827|PMID:22355118) RGD PMID:22355118 MGI:5314827 NCBI chr12:34,072,710...34,122,142
Ensembl chr12:34,072,683...34,122,101
JBrowse link
G Bin1 bridging integrator 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5583915|PMID:24836577)
(PMID:24755653)
Ensembl
RGD
PMID:24755653 PMID:24836577 GO_REF:0000107 MGI:5583915 NCBI chr18:24,009,731...24,067,267
Ensembl chr18:24,009,653...24,067,263
JBrowse link
G Csrp3 cysteine and glycine rich protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1328311 (MGI:5927126|PMID:28706255)
Ensembl
RGD
PMID:28706255 GO_REF:0000107 MGI:5927126 NCBI chr 1:98,528,067...98,546,647
Ensembl chr 1:98,528,068...98,546,653
JBrowse link
G Dysf dysferlin involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1919192|MGI:3055150 (MGI:5545678|PMID:24302765), (MGI:5548046|PMID:24177035)
RGD PMID:24177035 PMID:24302765 PMID:21873635 MGI:5545678 MGI:5548046, RGD:13792537 NCBI chr 4:116,490,877...116,690,709
Ensembl chr 4:116,490,616...116,690,709
JBrowse link
G Fer1l5 fer-1-like family member 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:38,605,835...38,661,869
Ensembl chr 9:38,607,843...38,660,425
JBrowse link
G Myof myoferlin involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1349385 (MGI:5548046|PMID:24177035)
RGD PMID:24177035 PMID:21873635 MGI:5548046, RGD:13792537 NCBI chr 1:235,673,666...235,822,413
Ensembl chr 1:235,673,666...235,822,334
JBrowse link
G Sypl2 synaptophysin-like 2 acts_upstream_of_or_within ISO MGI:1330824 (MGI:5927126|PMID:28706255) RGD PMID:28706255 MGI:5927126 NCBI chr 2:195,849,062...195,863,794
Ensembl chr 2:195,849,062...195,863,794
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    developmental process 6770
      cellular developmental process 4478
        cell development 2456
          muscle cell development 220
            T-tubule organization 8
Path 2
Term Annotations click to browse term
  biological_process 19492
    cellular process 18340
      cellular component organization or biogenesis 6481
        cellular component organization 6235
          endomembrane system organization 504
            plasma membrane organization 147
              T-tubule organization 8
paths to the root