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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of nuclear cell cycle DNA replication
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Accession:GO:0033262 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of The DNA-dependent DNA replication that occurs in the nucleus of eukaryotic organisms as part of the cell cycle.
Synonyms:exact_synonym: regulation of DNA replication involved in S phase
 related_synonym: regulation of DNA replication during S phase


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regulation of nuclear cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation-induced cytidine deaminase involved_in ISO (PMID:19734146) RGD PMID:19734146 NCBI chr 4:157,446,120...157,455,958
Ensembl chr 4:155,774,132...155,783,972 		JBrowse link
G Cdt1 chromatin licensing and DNA replication factor 1 acts_upstream_of_or_within ISO
IEA 		(PMID:11850834)
GO_REF:0000107 		RGD
Ensembl		 PMID:11850834 GO_REF:0000107 NCBI chr19:50,620,713...50,625,659
Ensembl chr19:50,620,713...50,625,659 		JBrowse link
G Dach1 dachshund family transcription factor 1 involved_in ISO
IEA 		(PMID:16980615)
GO_REF:0000107 		RGD
Ensembl		 PMID:16980615 GO_REF:0000107 NCBI chr15:74,528,122...74,909,811
Ensembl chr15:74,529,208...74,909,922 		JBrowse link
G Ilkap ILK associated serine/threonine phosphatase IDA RGD PMID:9857069 RGD:632254 NCBI chr 9:91,966,440...91,988,791
Ensembl chr 9:91,966,441...91,988,892 		JBrowse link
G Nuggc nuclear GTPase, germinal center associated involved_in ISO (PMID:19734146) RGD PMID:19734146 NCBI chr15:39,821,851...39,866,122
Ensembl chr15:39,821,855...39,866,122 		JBrowse link
positive regulation of mitotic cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO
IEA 		(PMID:2161540)
GO_REF:0000107 		RGD
Ensembl		 PMID:2161540 GO_REF:0000107 NCBI chr16:73,194,631...73,249,855
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
positive regulation of nuclear cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX, chromatin remodeler involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:24651726) 		UniProt
Ensembl
RGD		 PMID:24651726 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:74,916,548...75,062,880
Ensembl chr  X:70,850,981...70,997,330 		JBrowse link
G Cdc7 cell division cycle 7 involved_in ISO
IEA 		(PMID:15668232)
GO_REF:0000107 		RGD
Ensembl		 PMID:15668232 GO_REF:0000107 NCBI chr14:2,949,538...2,969,656
Ensembl chr14:2,804,661...2,824,778 		JBrowse link
G Dbf4 DBF4-CDC7 kinase regulatory subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:26,631,491...26,656,080
Ensembl chr 4:25,676,634...25,701,066 		JBrowse link
G Dbf4b DBF4B-CDC7 kinase regulatory subunit involved_in ISO (PMID:15668232) RGD PMID:15668232 NCBI chr10:88,209,913...88,219,336 JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO
IEA 		(PMID:20237820)
GO_REF:0000107 		RGD
Ensembl		 PMID:20237820 GO_REF:0000107 NCBI chr 3:126,822,280...126,919,532
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Wiz WIZ zinc finger involved_in ISO (PMID:23545495) RGD PMID:23545495 NCBI chr 7:12,017,374...12,045,812
Ensembl chr 7:11,367,035...11,395,490 		JBrowse link
regulation of mitotic cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO
IEA 		MGI:2180033 (PMID:15980864)
GO_REF:0000107 		RGD
Ensembl		 PMID:15980864 GO_REF:0000107 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      cell cycle process 1324
        regulation of cell cycle process 758
          regulation of nuclear cell cycle DNA replication 13
            negative regulation of nuclear cell cycle DNA replication + 0
            positive regulation of nuclear cell cycle DNA replication + 7
            regulation of initiation of premeiotic DNA replication + 0
            regulation of mitotic cell cycle DNA replication + 2
Path 2
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      metabolic process 12158
        primary metabolic process 10727
          nucleobase-containing compound metabolic process 5900
            nucleic acid metabolic process 5283
              DNA metabolic process 977
                DNA replication 273
                  DNA-templated DNA replication 154
                    cell cycle DNA replication 40
                      nuclear DNA replication 35
                        regulation of nuclear cell cycle DNA replication 13
                          negative regulation of nuclear cell cycle DNA replication + 0
                          positive regulation of nuclear cell cycle DNA replication + 7
                          regulation of initiation of premeiotic DNA replication + 0
                          regulation of mitotic cell cycle DNA replication + 2
paths to the root