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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of immature T cell proliferation in thymus
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Accession:GO:0033084 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of immature T cell proliferation in the thymus.
Comment:Note that immunologists typically use the word 'development' to refer to cells of B or T cell lineages undergoing the process that GO describes as 'cell differentiation'.
Synonyms:exact_synonym: regulation of thymic T cell proliferation;   regulation of thymocyte cell proliferation;   regulation of thymocyte proliferation

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regulation of immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnfrsf9 TNF receptor superfamily member 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8405064) Ensembl
MGI		 PMID:8405064 GO_REF:0000107 NCBI chrNW_004936623:2,398,446...2,407,990
Ensembl chrNW_004936623:2,399,752...2,407,009 		JBrowse link
G Tnfsf9 TNF superfamily member 9 acts_upstream_of_or_within ISO (PMID:8405064) MGI PMID:8405064 NCBI chrNW_004936588:3,844,924...3,847,218 JBrowse link
negative regulation of immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468 		JBrowse link
G Clec4g C-type lectin domain family 4 member G involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23487419) Ensembl
MGI		 PMID:23487419 GO_REF:0000107 NCBI chrNW_004936588:4,737,278...4,740,750
Ensembl chrNW_004936588:4,738,182...4,740,750 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16230479) Ensembl
MGI		 PMID:16230479 GO_REF:0000107 NCBI chrNW_004936490:14,887,062...14,910,038
Ensembl chrNW_004936490:14,887,043...14,909,956 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:1,474,693...1,480,562
Ensembl chrNW_004936569:1,474,665...1,480,568 		JBrowse link
G Tmem131l transmembrane 131 like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936576:311,649...479,507
Ensembl chrNW_004936576:420,502...479,513 		JBrowse link
positive regulation of immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:17210642) MGI PMID:17210642 NCBI chrNW_004936483:16,194,092...16,295,803
Ensembl chrNW_004936483:16,194,092...16,255,905 		JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:5,707,542...5,716,966
Ensembl chrNW_004936520:5,707,778...5,717,024 		JBrowse link
G Foxp3 forkhead box P3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16230479) Ensembl
MGI		 PMID:16230479 GO_REF:0000107 NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308 		JBrowse link
G Il1a interleukin 1 alpha involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936783:1,210,715...1,218,315
Ensembl chrNW_004936783:1,210,809...1,218,315 		JBrowse link
G Il1b interleukin 1 beta involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:8590311 GO_REF:0000118 RGD:7401228 NCBI chrNW_004936783:1,251,678...1,256,807
Ensembl chrNW_004936783:1,252,158...1,257,165 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11894098) Ensembl
MGI		 PMID:11894098 GO_REF:0000107 NCBI chrNW_004936544:3,606,925...3,653,248
Ensembl chrNW_004936544:3,606,879...3,655,532 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15969
    immune system process 2209
      leukocyte activation 921
        lymphocyte activation 751
          lymphocyte differentiation 402
            T cell differentiation 299
              T cell differentiation in thymus 101
                immature T cell proliferation in thymus 16
                  regulation of immature T cell proliferation in thymus 14
                    negative regulation of immature T cell proliferation in thymus 5
                    positive regulation of immature T cell proliferation in thymus 7
Path 2
Term Annotations click to browse term
  biological_process 15969
    cellular process 15075
      cellular developmental process 4256
        cell differentiation 4255
          cell development 3054
            hemopoiesis 956
              leukocyte differentiation 607
                mononuclear cell differentiation 491
                  lymphocyte differentiation 402
                    T cell differentiation 299
                      T cell differentiation in thymus 101
                        immature T cell proliferation in thymus 16
                          regulation of immature T cell proliferation in thymus 14
                            negative regulation of immature T cell proliferation in thymus 5
                            positive regulation of immature T cell proliferation in thymus 7
paths to the root