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ONTOLOGY REPORT - ANNOTATIONS

Term:tetrapyrrole catabolic process
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Accession:GO:0033015 term browser browse the term
Definition:The chemical reactions and pathways leading to the breakdown of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next.
Synonyms:exact_synonym: tetrapyrrole breakdown;   tetrapyrrole catabolism;   tetrapyrrole degradation


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bilirubin conjugation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ugt1a1 UDP glucuronosyltransferase family 1 member A1 TAS RGD PMID:11829457 RGD:70480 NCBI chr 9:88,801,344...88,808,465
Ensembl chr 9:88,713,184...88,808,465 		JBrowse link
cobalamin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cubn cubilin IMP RGD PMID:14576052 RGD:8554807 NCBI chr17:76,385,046...76,593,133
Ensembl chr17:76,385,060...76,593,231 		JBrowse link
heme catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blvra biliverdin reductase A involved_in ISO
IEA		 (PMID:10858451)
GO_REF:0000104		 RGD
UniProt		 PMID:10858451 GO_REF:0000104 NCBI chr 3:114,340,778...114,366,048
Ensembl chr 3:114,340,838...114,366,033 		JBrowse link
G Blvrb biliverdin reductase B involved_in ISO (PMID:10858451), (PMID:7929092) RGD PMID:7929092 PMID:10858451 NCBI chr 1:82,738,646...82,756,312
Ensembl chr 1:82,738,695...82,770,375 		JBrowse link
G Hmox1 heme oxygenase 1 involved_in
acts_upstream_of_or_within		 IDA
IBA
ISO
IEA		 GO_REF:0000033
MGI:1914989 (PMID:31571584)
GO_REF:0000107
(PMID:17915953)		 GO_Central
RGD
Ensembl		 PMID:17915953 PMID:31571584 PMID:15226268 GO_REF:0000033 GO_REF:0000107, RGD:1547877 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079 		JBrowse link
G Hmox2 heme oxygenase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:10,797,076...10,831,178
Ensembl chr10:10,797,055...10,831,148 		JBrowse link
G Hmox2-ps1 heme oxygenase (decycling) 2, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:200,299,951...200,302,161 JBrowse link
heme oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmox1 heme oxygenase 1 involved_in ISO
IBA
IEA		 (PMID:17915953)
GO_REF:0000033
GO_REF:0000104		 RGD
GO_Central
UniProt		 PMID:17915953 GO_REF:0000033 GO_REF:0000104 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079 		JBrowse link
G Hmox2 heme oxygenase 2 involved_in TAS
IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro
RGD		 PMID:12114211 GO_REF:0000002 GO_REF:0000033, RGD:625638 NCBI chr10:10,797,076...10,831,178
Ensembl chr10:10,797,055...10,831,148 		JBrowse link
G Hmox2-ps1 heme oxygenase (decycling) 2, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:200,299,951...200,302,161 JBrowse link
porphyrin-containing compound catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Urod uroporphyrinogen decarboxylase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:11069625), (PMID:11719352), (PMID:14633982), (PMID:21668429)		 UniProt
Ensembl
RGD		 PMID:11069625 PMID:11719352 PMID:14633982 PMID:21668429 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:130,464,695...130,468,783
Ensembl chr 5:130,455,217...130,468,808 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20076
    cellular process 19155
      metabolic process 11953
        tetrapyrrole metabolic process 52
          tetrapyrrole catabolic process 8
            cobalamin catabolic process 1
            corrin catabolic process 0
            negative regulation of tetrapyrrole catabolic process + 0
            porphyrin-containing compound catabolic process + 7
            positive regulation of tetrapyrrole catabolic process + 0
            regulation of tetrapyrrole catabolic process + 0
paths to the root