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ONTOLOGY REPORT - ANNOTATIONS


Term:SREBP signaling pathway
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Accession:GO:0032933 term browser browse the term
Definition:The series of molecular signals from the endoplasmic reticulum to the nucleus generated as a consequence of decreased levels of one or more sterols (and in some yeast, changes in oxygen levels) and which proceeds through activation of a sterol response element binding transcription factor (SREBP) to result in up-regulation of target gene transcription.
Synonyms:exact_synonym: ER to nucleus sterol response pathway;   ER-nuclear sterol response pathway;   SREBP signalling;   SREBP target gene transcriptional activation;   SREBP-mediated signalling pathway;   endoplasmic reticulum to nucleus sterol response pathway;   endoplasmic reticulum-nuclear sterol response pathway;   positive regulation of sterol regulatory element binding protein target gene transcription;   positive regulation of sterol regulatory element binding protein target gene transcription involved in sterol depletion response;   sterol depletion response, SREBP target gene transcriptional activation;   sterol response element binding protein signaling pathway;   up regulation of sterol regulatory element binding protein target gene transcription;   upregulation of sterol regulatory element binding protein target gene transcription
 narrow_synonym: activation of sterol regulatory element binding protein target gene transcription;   positive regulation of transcription via sterol regulatory element binding;   positive regulation of transcription via sterol regulatory element binding involved in ER-nuclear sterol response pathway;   stimulation of sterol regulatory element binding protein target gene transcription
 broad_synonym: sterol regulatory element binding protein target gene transcriptional activation
 related_synonym: SREBP-mediated signaling pathway
 alt_id: GO:0006994;   GO:0030967;   GO:0035104



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SREBP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARHGEF10L Rho guanine nucleotide exchange factor 10 like involved_in IDA
IBA
IEA
(PMID:16112081) HGNC-UCL
GO_Central
TreeGrafter
PMID:16112081 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:17,513,435...17,697,875
Ensembl chr 1:17,539,698...17,697,874
JBrowse link
G EIF2A eukaryotic translation initiation factor 2A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18852460) Ensembl
MGI
PMID:18852460 GO_REF:0000107 NCBI chr 3:150,546,787...150,586,016
Ensembl chr 3:150,546,678...150,586,016
JBrowse link
G EIF2AK3 eukaryotic translation initiation factor 2 alpha kinase 3 acts_upstream_of_or_within ISO (PMID:18852460) MGI PMID:18852460 NCBI chr 2:88,556,741...88,628,145
Ensembl chr 2:88,556,741...88,691,518
JBrowse link
G ERLIN1 ER lipid raft associated 1 involved_in IMP
IEA
IBA
(PMID:24217618) UniProt
TreeGrafter
GO_Central
PMID:24217618 GO_REF:0000033 GO_REF:0000118 NCBI chr10:100,150,094...100,186,029
Ensembl chr10:100,150,094...100,186,033
JBrowse link
G ERLIN2 ER lipid raft associated 2 involved_in IMP
IEA
IBA
(PMID:24217618) UniProt
TreeGrafter
GO_Central
PMID:24217618 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:37,736,634...37,758,422
Ensembl chr 8:37,736,601...37,758,422
JBrowse link
G INSIG1 insulin induced gene 1 involved_in IDA
IEA
IBA
(PMID:12242332), (PMID:32322062) UniProt
TreeGrafter
GO_Central
PMID:12242332 PMID:32322062 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:155,297,878...155,310,235
Ensembl chr 7:155,297,776...155,310,235
JBrowse link
G INSIG2 insulin induced gene 2 involved_in IDA
IEA
IBA
(PMID:12242332), (PMID:17428920), (PMID:32322062) UniProt
TreeGrafter
GO_Central
PMID:12242332 PMID:17428920 PMID:32322062 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:118,088,471...118,110,997
Ensembl chr 2:118,088,452...118,110,997
JBrowse link
G SCAP SREBF chaperone involved_in IDA
IMP
IEA
(PMID:32322062)
(PMID:11726962)
UniProt
InterPro
PMID:11726962 PMID:32322062 GO_REF:0000002 NCBI chr 3:47,413,681...47,477,127
Ensembl chr 3:47,413,681...47,477,126
JBrowse link
G SREBF1 sterol regulatory element binding transcription factor 1 involved_in IMP
IDA
(PMID:27614840)
(PMID:27614840), (PMID:32322062)
CACAO PMID:27614840 PMID:32322062 NCBI chr17:17,811,334...17,836,986
Ensembl chr17:17,810,399...17,837,002
JBrowse link
G SREBF2 sterol regulatory element binding transcription factor 2 involved_in IDA
IMP
(PMID:27614840), (PMID:32322062) UniProt
CACAO
PMID:27614840 PMID:32322062 NCBI chr22:41,833,105...41,907,305
Ensembl chr22:41,833,105...41,907,306
JBrowse link
negative regulation of SREBP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBXW7 F-box and WD repeat domain containing 7 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 4:152,320,544...152,536,092
Ensembl chr 4:152,320,544...152,536,092
JBrowse link
positive regulation of SREBP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIR96 microRNA 96 involved_in IDA (PMID:30460077) BHF-UCL PMID:30460077 NCBI chr 7:129,774,692...129,774,769
Ensembl chr 7:129,774,692...129,774,769
JBrowse link
G SPRING1 SREBF pathway regulator in golgi 1 involved_in IEA
IMP
(PMID:32111832) InterPro
Ensembl
UniProt
PMID:32111832 GO_REF:0000002 GO_REF:0000107 NCBI chr12:116,710,171...116,738,069
Ensembl chr12:116,710,171...116,738,070
JBrowse link
G ZBTB7B zinc finger and BTB domain containing 7B involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:155,001,750...155,018,523
Ensembl chr 1:155,002,630...155,018,523
JBrowse link
regulation of SREBP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMFR autocrine motility factor receptor involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr16:56,361,452...56,425,545
Ensembl chr16:56,361,452...56,425,545
JBrowse link
G TMED2 transmembrane p24 trafficking protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28797121) Ensembl
MGI
PMID:28797121 GO_REF:0000107 NCBI chr12:123,584,552...123,598,582
Ensembl chr12:123,584,533...123,598,582
JBrowse link
SREBP-SCAP complex retention in endoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G INSIG1 insulin induced gene 1 involved_in IDA
IBA
IEA
(PMID:12202038), (PMID:15899885), (PMID:32322062) UniProt
GO_Central
TreeGrafter
PMID:12202038 PMID:15899885 PMID:32322062 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:155,297,878...155,310,235
Ensembl chr 7:155,297,776...155,310,235
JBrowse link
G INSIG2 insulin induced gene 2 involved_in IDA
IEA
IBA
(PMID:15899885), (PMID:32322062) UniProt
TreeGrafter
GO_Central
PMID:15899885 PMID:32322062 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:118,088,471...118,110,997
Ensembl chr 2:118,088,452...118,110,997
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19669
    cellular process 18300
      signal transduction 6573
        ER-nucleus signaling pathway 51
          SREBP signaling pathway 16
            negative regulation of SREBP signaling pathway + 3
            positive regulation of SREBP signaling pathway + 3
            regulation of SREBP signaling pathway + 8
Path 2
Term Annotations click to browse term
  biological_process 19669
    biological regulation 13397
      regulation of biological process 13016
        regulation of cellular process 12447
          signal transduction 6573
            ER-nucleus signaling pathway 51
              SREBP signaling pathway 16
                negative regulation of SREBP signaling pathway + 3
                positive regulation of SREBP signaling pathway + 3
                regulation of SREBP signaling pathway + 8
paths to the root