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ONTOLOGY REPORT - ANNOTATIONS


Term:circadian regulation of gene expression
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Accession:GO:0032922 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of gene expression such that an expression pattern recurs with a regularity of approximately 24 hours.
Synonyms:related_synonym: circadian regulation of protein expression;   diurnal variation of gene expression;   diurnal variation of protein expression


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circadian regulation of gene expression term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADK adenosine kinase JBrowse link 4 24,540,626 25,047,032 RGD:9068941
G AHR aryl hydrocarbon receptor JBrowse link 14 31,743,704 31,793,484 RGD:9068941
G ARNTL aryl hydrocarbon receptor nuclear translocator like JBrowse link 21 36,254,235 36,323,915 RGD:13508589
G ATF4 activating transcription factor 4 JBrowse link 10 25,528,880 25,531,018 RGD:13508589
G BHLHE40 basic helix-loop-helix family member e40 JBrowse link 20 12,641,872 12,647,519 RGD:13508589
G BHLHE41 basic helix-loop-helix family member e41 JBrowse link 27 21,464,302 21,469,119 RGD:9068941
G CARTPT CART prepropeptide JBrowse link 2 54,865,043 54,867,410 RGD:9068941
G CAVIN3 caveolae associated protein 3 JBrowse link 21 29,661,235 29,663,393 RGD:9068941
G CIART circadian associated repressor of transcription JBrowse link 17 59,524,715 59,529,535 RGD:13508589
G CLOCK clock circadian regulator JBrowse link 13 47,684,409 47,825,733 RGD:9068941
G CREM cAMP responsive element modulator JBrowse link 2 1,755,189 1,828,746 RGD:9068941
G CRY1 cryptochrome circadian regulator 1 JBrowse link 10 31,681,098 31,792,995 RGD:13508589
G CRY2 cryptochrome circadian regulator 2 JBrowse link 18 43,538,335 43,573,651 RGD:13508589
G CSNK1D casein kinase 1 delta JBrowse link 9 83,395 110,309 RGD:13508589
G CSNK1E casein kinase 1 epsilon JBrowse link 10 26,386,646 26,412,429 RGD:13508589
G DRD2 dopamine receptor D2 JBrowse link 5 19,732,842 19,795,241 RGD:13508589
G DRD3 dopamine receptor D3 JBrowse link 33 18,369,362 18,414,465 RGD:13508589
G EGR1 early growth response 1 JBrowse link 11 26,046,195 26,049,806 RGD:13508589
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 JBrowse link 10 68,067,817 68,125,001 RGD:13508589
G HDAC1 histone deacetylase 1 JBrowse link 2 68,901,339 68,936,473 RGD:13508589
G HDAC2 histone deacetylase 2 JBrowse link 12 70,053,822 70,083,491 RGD:9068941
G HDAC3 histone deacetylase 3 JBrowse link 2 36,583,283 36,598,121 RGD:9068941
G HNF1B HNF1 homeobox B JBrowse link 9 37,437,992 37,493,200 RGD:9068941
G HNRNPU heterogeneous nuclear ribonucleoprotein U JBrowse link 7 35,832,956 35,842,898 RGD:13508589
G HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 JBrowse link X 45,234,666 45,409,641 RGD:13508589
G ID2 inhibitor of DNA binding 2 JBrowse link 10 54,954,852 54,957,116 RGD:9068941
G ID3 inhibitor of DNA binding 3, HLH protein JBrowse link 2 75,880,659 75,881,786 RGD:13508589
G ID4 inhibitor of DNA binding 4, HLH protein JBrowse link 35 18,357,751 18,358,143 RGD:13508589
G KDM2A lysine demethylase 2A JBrowse link 18 50,178,511 50,294,097 RGD:13508589
G KDM5A lysine demethylase 5A JBrowse link 27 42,364,606 42,447,839 RGD:13508589
G KDM8 lysine demethylase 8 JBrowse link 6 19,366,813 19,390,082 RGD:13508589
G KMT2A lysine methyltransferase 2A JBrowse link 5 15,212,559 15,302,825 RGD:13508589
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 JBrowse link 21 47,952,019 47,995,530 RGD:9068941
G MAGED1 MAGE family member D1 JBrowse link X 44,395,091 44,458,705 RGD:9068941
G MC3R melanocortin 3 receptor JBrowse link 24 41,492,371 41,494,033 RGD:13508589
G MTA1 metastasis associated 1 JBrowse link 8 72,752,894 72,772,236 RGD:9068941
G MYBBP1A MYB binding protein 1a JBrowse link 5 30,528,141 30,538,815 RGD:13508589
G MYCBP2 MYC binding protein 2 JBrowse link 22 30,614,692 30,874,173 RGD:9068941
G NAMPT nicotinamide phosphoribosyltransferase JBrowse link 18 14,110,045 14,211,268 RGD:13508589
G NCOA2 nuclear receptor coactivator 2 JBrowse link 29 19,253,849 19,471,640 RGD:9068941
G NCOR1 nuclear receptor corepressor 1 JBrowse link 5 39,687,530 39,837,003 RGD:9068941
G NGFR nerve growth factor receptor JBrowse link 9 25,598,468 25,621,021 RGD:13508589
G NOCT nocturnin JBrowse link 19 3,587,769 3,612,184 RGD:13508589
G NPAS2 neuronal PAS domain protein 2 JBrowse link 10 41,846,766 42,005,058 RGD:9068941
G NR0B2 nuclear receptor subfamily 0 group B member 2 JBrowse link 2 73,234,482 73,236,548 RGD:13508589
G NR1D1 nuclear receptor subfamily 1 group D member 1 JBrowse link 9 22,461,556 22,469,243 RGD:13508589
G NRIP1 nuclear receptor interacting protein 1 JBrowse link 31 11,852,330 11,951,735 RGD:13508589
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase JBrowse link X 55,821,227 55,857,597 RGD:13508589
G PER1 period circadian regulator 1 JBrowse link 5 32,957,517 32,972,368 RGD:13508589
G PER2 period circadian regulator 2 JBrowse link 25 48,716,499 48,761,617 RGD:13508589
G PER3 period circadian regulator 3 JBrowse link 5 61,445,580 61,499,393 RGD:13508589
G PML PML nuclear body scaffold JBrowse link 30 37,232,337 37,278,434 RGD:9068941
G PPARA peroxisome proliferator activated receptor alpha JBrowse link 10 19,934,020 20,006,096 RGD:13508589
G PPARGC1A PPARG coactivator 1 alpha JBrowse link 3 85,645,942 86,284,570 RGD:9068941
G PPP1CA protein phosphatase 1 catalytic subunit alpha JBrowse link 18 50,062,352 50,065,166 RGD:13508589
G PPP1CB protein phosphatase 1 catalytic subunit beta JBrowse link 17 22,680,691 22,699,999 RGD:13508589
G PPP1CC protein phosphatase 1 catalytic subunit gamma JBrowse link 26 8,497,350 8,518,467 RGD:9068941
G PRKG2 protein kinase cGMP-dependent 2 JBrowse link 32 5,266,435 5,365,396 RGD:9068941
G PRMT5 protein arginine methyltransferase 5 JBrowse link 8 3,248,349 3,257,567 RGD:9068941
G RAI1 retinoic acid induced 1 JBrowse link 5 41,687,436 41,797,354 RGD:13508589
G RBM4B RNA binding motif protein 4B JBrowse link 18 50,676,138 50,686,061 RGD:13508589
G RELB RELB proto-oncogene, NF-kB subunit JBrowse link 1 110,436,677 110,466,709 RGD:13508589
G RORA RAR related orphan receptor A JBrowse link 30 25,315,974 26,026,708 RGD:13508589
G RORC RAR related orphan receptor C JBrowse link 17 60,821,498 60,842,485 RGD:9068941
G SIRT1 sirtuin 1 JBrowse link 4 19,188,616 19,220,031 RGD:9068941
G TOP1 DNA topoisomerase I JBrowse link 24 29,075,267 29,166,733 RGD:13508589
G USP2 ubiquitin specific peptidase 2 JBrowse link 5 14,525,685 14,550,914 RGD:9068941
G ZFHX3 zinc finger homeobox 3 JBrowse link 5 78,450,963 78,635,615 RGD:9068941
G ZPBP2 zona pellucida binding protein 2 JBrowse link 9 22,632,114 22,639,507 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16041
    multicellular organismal process 7507
      circadian regulation of gene expression 69
Path 2
Term Annotations click to browse term
  biological_process 16041
    biological regulation 11410
      regulation of biological process 10829
        regulation of metabolic process 6328
          regulation of macromolecule metabolic process 5848
            regulation of gene expression 4310
              circadian regulation of gene expression 69
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.