ONTOLOGY REPORT - ANNOTATIONS
Term: chemokine production
Accession: GO:0032602
browse the term
Definition: The appearance of a chemokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. All chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation. Some chemokines are considered pro-inflammatory and can be induced during an immune response to recruit cells of the immune system to a site of infection, while others are considered homeostatic and are involved in controlling the migration of cells during normal processes of tissue maintenance or development. Chemokines are found in all vertebrates, some viruses and some bacteria.
Synonyms: exact_synonym: chemokine anabolism; chemokine biosynthesis; chemokine formation; chemokine synthesis
narrow_synonym: chemokine biosynthetic process; chemokine metabolic process; chemokine secretion
alt_id: GO:0042033; GO:0050755; GO:0090195
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Arg2
arginase 2
involved_in
IEA ISO
GO_REF:0000107 (MGI:5908771|PMID:27074721)
Ensembl RGD
PMID:27074721
GO_REF:0000107 MGI:5908771
NCBI chr 6:97,936,002...97,961,379
Ensembl chr 6:97,936,002...97,961,378
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Arg2
arginase 2
involved_in
IEA ISO
GO_REF:0000107 (MGI:5908771|PMID:27074721)
Ensembl RGD
PMID:27074721
GO_REF:0000107 MGI:5908771
NCBI chr 6:97,936,002...97,961,379
Ensembl chr 6:97,936,002...97,961,378
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Mul1
mitochondrial E3 ubiquitin protein ligase 1
involved_in
ISO
(PMID:23399697)
RGD
PMID:23399697
NCBI chr 5:150,652,812...150,661,863
Ensembl chr 5:150,652,812...150,661,863
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Oas3
2'-5'-oligoadenylate synthetase 3
involved_in
ISO IEA
(PMID:30078389) GO_REF:0000107
RGD Ensembl
PMID:30078389
GO_REF:0000107
NCBI chr12:35,779,028...35,802,781
Ensembl chr12:35,779,022...35,802,781
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Sirpa
signal-regulatory protein alpha
involved_in
ISO
(MGI:3760575|PMID:17954568)
RGD
PMID:17954568
MGI:3760575
NCBI chr 3:116,819,730...116,858,099
Ensembl chr 3:116,819,726...116,858,098
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Ticam2
TIR domain containing adaptor molecule 2
involved_in
ISO
(PMID:19412184)
RGD
PMID:19412184
NCBI chr18:39,289,902...39,311,462
Ensembl chr18:39,294,453...39,311,462
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Klf4
KLF transcription factor 4
involved_in
ISO
(PMID:20551324)
RGD
PMID:20551324
NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602
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Map2k5
mitogen activated protein kinase kinase 5
involved_in
IMP
PMID:20551324
BHF-UCL
PMID:20551324
RGD:8553940
NCBI chr 8:63,625,220...63,852,090
Ensembl chr 8:63,625,221...63,851,983
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Mir146a
microRNA 146a
acts_upstream_of
ISO
(PMID:21329689)
RGD
PMID:21329689
NCBI chr10:27,848,516...27,848,610
Ensembl chr10:27,848,516...27,848,610
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Oas1a
2'-5' oligoadenylate synthetase 1A
involved_in
ISO
(PMID:30078389)
RGD
PMID:30078389
NCBI chr12:35,669,798...35,680,505
Ensembl chr12:35,669,801...35,680,517
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Oas3
2'-5'-oligoadenylate synthetase 3
involved_in
ISO IEA
(PMID:30078389) GO_REF:0000107
RGD Ensembl
PMID:30078389
GO_REF:0000107
NCBI chr12:35,779,028...35,802,781
Ensembl chr12:35,779,022...35,802,781
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Oas3
2'-5'-oligoadenylate synthetase 3
involved_in
ISO IEA
(PMID:30078389) GO_REF:0000107
RGD Ensembl
PMID:30078389
GO_REF:0000107
NCBI chr12:35,779,028...35,802,781
Ensembl chr12:35,779,022...35,802,781
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Elane
elastase, neutrophil expressed
involved_in
ISO
(PMID:12223522)
RGD
PMID:12223522
NCBI chr 7:9,817,251...9,819,174
Ensembl chr 7:9,817,252...9,819,100
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Epha2
Eph receptor A2
acts_upstream_of_or_within
ISO
MGI:3040415 (PMID:19443703)
RGD
PMID:19443703
NCBI chr 5:153,605,644...153,634,115
Ensembl chr 5:153,605,644...153,634,117
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F2rl1
F2R like trypsin receptor 1
involved_in
ISO
(PMID:19865078)
RGD
PMID:19865078
NCBI chr 2:26,772,274...26,785,226
Ensembl chr 2:26,772,278...26,785,226
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Il6
interleukin 6
acts_upstream_of_or_within
ISO
MGI:1857197 (PMID:12925700)
RGD
PMID:12925700
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
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Lgals9
galectin 9
involved_in
ISO
(PMID:25754930)
RGD
PMID:25754930
NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045
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Lilrb4
leukocyte immunoglobulin like receptor B4
involved_in
ISO
(PMID:19380766)
RGD
PMID:19380766
NCBI chr 1:69,805,020...69,810,628
Ensembl chr 1:69,805,250...69,810,660
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Mir106a
microRNA 106a
involved_in
ISO
(PMID:23399447)
RGD
PMID:23399447
NCBI chr X:132,422,584...132,422,661
Ensembl chr X:132,422,584...132,422,661
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Mir140
microRNA 140
involved_in
ISO
(PMID:24928442)
RGD
PMID:24928442
NCBI chr19:35,465,577...35,465,675
Ensembl chr19:35,465,577...35,465,675
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Mir17
microRNA 17
involved_in
ISO
(PMID:23399447)
RGD
PMID:23399447
NCBI chr15:92,180,629...92,180,712
Ensembl chr15:92,180,629...92,180,712
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Mir214
microRNA 214
involved_in
ISO
(PMID:30703347)
RGD
PMID:30703347
NCBI chr13:74,588,374...74,588,481
Ensembl chr13:74,588,372...74,588,481
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Mir26b
microRNA 26b
acts_upstream_of
ISO
(PMID:26222045)
RGD
PMID:26222045
NCBI chr 9:75,976,596...75,976,680
Ensembl chr 9:75,976,596...75,976,680
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Mir34a
microRNA 34a
involved_in
ISO
(PMID:33229509)
RGD
PMID:33229509
NCBI chr 5:160,533,002...160,533,103
Ensembl chr 5:160,533,002...160,533,103
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Sigirr
single Ig and TIR domain containing
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:2673012|PMID:12925853)
HGNC-UCL Ensembl RGD
PMID:12925853
GO_REF:0000024 GO_REF:0000107 MGI:2673012
NCBI chr 1:196,195,363...196,208,692
Ensembl chr 1:196,199,462...196,202,269
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Slc37a4
solute carrier family 37 member 4
acts_upstream_of_or_within
ISO
MGI:3046091 (PMID:16891306)
RGD
PMID:16891306
NCBI chr 8:44,723,216...44,729,301
Ensembl chr 8:44,723,339...44,729,301
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Suz12
SUZ12 polycomb repressive complex 2 subunit
IMP
RGD
PMID:23192652
RGD:9586745
NCBI chr10:64,967,035...65,012,916
Ensembl chr10:64,966,967...65,012,738
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Lilrb4
leukocyte immunoglobulin like receptor B4
involved_in
ISO
(PMID:19380766)
RGD
PMID:19380766
NCBI chr 1:69,805,020...69,810,628
Ensembl chr 1:69,805,250...69,810,660
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Mir34a
microRNA 34a
involved_in
ISO
(PMID:33229509)
RGD
PMID:33229509
NCBI chr 5:160,533,002...160,533,103
Ensembl chr 5:160,533,002...160,533,103
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Oas1a
2'-5' oligoadenylate synthetase 1A
involved_in
ISO
(PMID:30078389)
RGD
PMID:30078389
NCBI chr12:35,669,798...35,680,505
Ensembl chr12:35,669,801...35,680,517
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Oas3
2'-5'-oligoadenylate synthetase 3
involved_in
ISO IEA
(PMID:30078389) GO_REF:0000107
RGD Ensembl
PMID:30078389
GO_REF:0000107
NCBI chr12:35,779,028...35,802,781
Ensembl chr12:35,779,022...35,802,781
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Arg2
arginase 2
involved_in
ISO IEA
(MGI:5908771|PMID:27074721) GO_REF:0000107
RGD Ensembl
PMID:27074721
GO_REF:0000107 MGI:5908771
NCBI chr 6:97,936,002...97,961,379
Ensembl chr 6:97,936,002...97,961,378
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Mefv
MEFV innate immunity regulator, pyrin
involved_in
ISO
(PMID:20041150)
RGD
PMID:20041150
NCBI chr10:11,786,948...11,796,977
Ensembl chr10:11,787,422...11,796,973
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Sirpa
signal-regulatory protein alpha
involved_in
ISO
(MGI:3760575|PMID:17954568)
RGD
PMID:17954568
MGI:3760575
NCBI chr 3:116,819,730...116,858,099
Ensembl chr 3:116,819,726...116,858,098
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Apod
apolipoprotein D
involved_in
ISO ISS
(PMID:18842892) GO_REF:0000024
RGD UniProt
PMID:18842892
GO_REF:0000024
NCBI chr11:69,431,261...69,452,306
Ensembl chr11:69,431,260...69,452,305
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C1qtnf3
C1q and TNF related 3
involved_in
ISO
(PMID:20739398)
RGD
PMID:20739398
NCBI chr 2:59,917,099...59,939,519
Ensembl chr 2:59,917,188...59,939,433
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Cd24
CD24 molecule
involved_in
ISO
(MGI:5913663|PMID:19264983)
RGD
PMID:19264983
MGI:5913663
NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662
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Erbin
erbb2 interacting protein
involved_in
ISO
UniProtKB:Q8K3Z0 (MGI:5640951|PMID:16203728)
RGD
PMID:16203728
MGI:5640951
NCBI chr 2:34,926,962...35,028,440
Ensembl chr 2:34,928,863...35,027,852
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Gstp1
glutathione S-transferase pi 1
involved_in
ISO ISS
(PMID:18962899) (MGI:5009376|PMID:18962899) GO_REF:0000024
RGD BHF-UCL
PMID:18962899
GO_REF:0000024 MGI:5009376
NCBI chr 1:201,337,762...201,340,230
Ensembl chr 1:201,321,672...201,340,226
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Nr1h4
nuclear receptor subfamily 1, group H, member 4
involved_in
ISO IEA
(MGI:5707586|PMID:18972444) GO_REF:0000107
RGD Ensembl
PMID:18972444
GO_REF:0000107 MGI:5707586
NCBI chr 7:23,846,122...23,942,085
Ensembl chr 7:23,846,122...23,942,047
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Socs5
suppressor of cytokine signaling 5
involved_in
ISO
(MGI:5659826|PMID:24255059)
RGD
PMID:24255059
MGI:5659826
NCBI chr 6:7,481,039...7,512,644
Ensembl chr 6:7,481,095...7,514,834
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Tslp
thymic stromal lymphopoietin
involved_in
ISO
(PMID:17242164)
RGD
PMID:17242164
NCBI chr18:24,447,409...24,454,244
Ensembl chr18:24,449,844...24,453,548
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Trim32
tripartite motif-containing 32
acts_upstream_of_or_within
ISO
(PMID:20054338)
RGD
PMID:20054338
NCBI chr 5:79,005,139...79,016,615
Ensembl chr 5:78,999,389...79,022,018
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Adcyap1
adenylate cyclase activating polypeptide 1
involved_in
ISO
(PMID:24696163)
RGD
PMID:24696163
NCBI chr 9:113,102,632...113,122,500
Ensembl chr 9:113,103,718...113,109,773
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Defb25
defensin beta 25
involved_in
ISO IBA
(PMID:24955228) GO_REF:0000033
RGD GO_Central
PMID:24955228
GO_REF:0000033
NCBI chr 3:141,098,813...141,099,752
Ensembl chr 3:141,098,856...141,099,696
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Mavs
mitochondrial antiviral signaling protein
involved_in
ISO
(PMID:16127453)
RGD
PMID:16127453
NCBI chr 3:118,451,650...118,466,094
Ensembl chr 3:118,451,743...118,466,094
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Mcoln2
mucolipin TRP cation channel 2
acts_upstream_of_or_within
ISO
MGI:5881907 (PMID:26432893)
RGD
PMID:26432893
NCBI chr 2:235,053,816...235,102,703
Ensembl chr 2:235,053,816...235,102,702
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Ticam2
TIR domain containing adaptor molecule 2
involved_in
ISO
(PMID:19412184) (MGI:3778252|PMID:18297073)
RGD
PMID:18297073 PMID:19412184
MGI:3778252
NCBI chr18:39,289,902...39,311,462
Ensembl chr18:39,294,453...39,311,462
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Trpv4
transient receptor potential cation channel, subfamily V, member 4
involved_in
ISO
(MGI:5440106|PMID:23021218)
RGD
PMID:23021218
MGI:5440106
NCBI chr12:41,938,533...41,977,517
Ensembl chr12:41,938,560...41,977,517
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Il17a
interleukin 17A
involved_in
IEA ISO
GO_REF:0000107 (MGI:4412246|PMID:18025225) (PMID:21350122)
Ensembl RGD
PMID:18025225 PMID:21350122
GO_REF:0000107 MGI:4412246
NCBI chr 9:23,144,402...23,147,889
Ensembl chr 9:23,144,402...23,147,889
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Il17f
interleukin 17F
involved_in
ISO IEA
(PMID:21350122) GO_REF:0000107
RGD Ensembl
PMID:21350122
GO_REF:0000107
NCBI chr 9:23,190,094...23,201,482
Ensembl chr 9:23,190,100...23,201,482
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Il17ra
interleukin 17 receptor A
involved_in
ISO
(PMID:21350122)
RGD
PMID:21350122
NCBI chr 4:153,667,534...153,690,174
Ensembl chr 4:153,667,534...153,690,174
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Tirap
TIR domain containing adaptor protein
involved_in
ISO
(MGI:3713420|PMID:16301656)
RGD
PMID:16301656
MGI:3713420
NCBI chr 8:33,531,724...33,548,508
Ensembl chr 8:33,531,725...33,547,432
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Trpv4
transient receptor potential cation channel, subfamily V, member 4
involved_in
ISO
(MGI:5440106|PMID:23021218)
RGD
PMID:23021218
MGI:5440106
NCBI chr12:41,938,533...41,977,517
Ensembl chr12:41,938,560...41,977,517
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Ccn1
cellular communication network factor 1
IMP
RGD
PMID:27653023
RGD:150429754
NCBI chr 2:234,562,410...234,565,370
Ensembl chr 2:234,562,408...234,565,484
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Cd74
CD74 molecule
involved_in
ISS ISO
GO_REF:0000024 (MGI:4943655|PMID:19413900)
BHF-UCL RGD
PMID:19413900
GO_REF:0000024 MGI:4943655
NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003
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Defb25
defensin beta 25
involved_in
ISO
(PMID:24955228)
RGD
PMID:24955228
NCBI chr 3:141,098,813...141,099,752
Ensembl chr 3:141,098,856...141,099,696
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Hdac1
histone deacetylase 1
IMP
RGD
PMID:22772764
RGD:9590127
NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
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Hmgb1
high mobility group box 1
involved_in
ISO
(PMID:26961863)
RGD
PMID:26961863
NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
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Lpl
lipoprotein lipase
involved_in
ISO IEA
RNAcentral:URS00005C83FD_10090 (MGI:6282927|PMID:22963823) GO_REF:0000107
RGD Ensembl
PMID:22963823
GO_REF:0000107 MGI:6282927
NCBI chr16:20,830,055...20,853,855
Ensembl chr16:20,829,465...20,855,249
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Lrp1
LDL receptor related protein 1
IMP
RGD
PMID:21290408
RGD:13800525
NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
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Mbp
myelin basic protein
involved_in
ISO IEA
(PMID:22524708) GO_REF:0000107
RGD Ensembl
PMID:22524708
GO_REF:0000107
NCBI chr18:75,855,878...75,966,404
Ensembl chr18:75,855,878...75,966,404
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Mcoln2
mucolipin TRP cation channel 2
acts_upstream_of_or_within
ISO
MGI:5881907 (PMID:26432893)
RGD
PMID:26432893
NCBI chr 2:235,053,816...235,102,703
Ensembl chr 2:235,053,816...235,102,702
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Mif
macrophage migration inhibitory factor
involved_in
ISO
(MGI:3773489|PMID:18056708)
RGD
PMID:18056708
MGI:3773489
NCBI chr20:12,790,919...12,791,784
Ensembl chr20:12,790,902...12,799,504
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Postn
periostin
IMP
RGD
PMID:24260297
RGD:10041046
NCBI chr 2:138,527,714...138,559,098
Ensembl chr 2:138,527,696...138,559,099
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Tgfb1
transforming growth factor, beta 1
involved_in
ISO
(PMID:32141990)
RGD
PMID:32141990
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
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Tirap
TIR domain containing adaptor protein
involved_in
ISO IBA
(MGI:3713420|PMID:16301656) GO_REF:0000033
RGD GO_Central
PMID:16301656
GO_REF:0000033 MGI:3713420
NCBI chr 8:33,531,724...33,548,508
Ensembl chr 8:33,531,725...33,547,432
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Tlr4
toll-like receptor 4
involved_in
ISO IEA
(PMID:21329689) GO_REF:0000107
RGD Ensembl
PMID:21329689
GO_REF:0000107
NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
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Tnf
tumor necrosis factor
involved_in
ISO
(PMID:20551324)
RGD
PMID:20551324
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
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Adam17
ADAM metallopeptidase domain 17
involved_in
ISO IEA
(PMID:16034137) GO_REF:0000107
RGD Ensembl
PMID:16034137
GO_REF:0000107
NCBI chr 6:40,872,936...40,920,700
Ensembl chr 6:40,872,856...40,920,639
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Adora2b
adenosine A2B receptor
acts_upstream_of_or_within
ISO
MGI:3773754 (PMID:18559975)
RGD
PMID:18559975
NCBI chr10:46,940,394...46,956,772
Ensembl chr10:46,940,384...46,956,772
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Ager
advanced glycosylation end product-specific receptor
involved_in
ISO
UniProtKB:P05067 (MGI:5424311|PMID:22406537)
RGD
PMID:22406537
MGI:5424311
NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
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Aif1
allograft inflammatory factor 1
involved_in
ISO
(PMID:24796669)
RGD
PMID:24796669
NCBI chr20:3,646,784...3,652,670
Ensembl chr20:3,646,777...3,652,668
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Aire
autoimmune regulator
involved_in
ISO
(MGI:4430981|PMID:19923453)
RGD
PMID:19923453
MGI:4430981
NCBI chr20:10,636,058...10,651,060
Ensembl chr20:10,636,123...10,651,060
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Alox15b
arachidonate 15-lipoxygenase, type B
involved_in
ISO IEA
(PMID:18067895) GO_REF:0000107
RGD Ensembl
PMID:18067895
GO_REF:0000107
NCBI chr10:53,892,496...53,901,812
Ensembl chr10:53,892,466...53,901,812
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App
amyloid beta precursor protein
involved_in
ISO IEA
UniProtKB:Q62151 (PMID:22406537) GO_REF:0000107
RGD Ensembl
PMID:22406537
GO_REF:0000107
NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
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C5
complement C5
involved_in
ISO
(PMID:14566334)
RGD
PMID:14566334
NCBI chr 3:18,270,696...18,361,994
Ensembl chr 3:18,270,696...18,361,994
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Card9
caspase recruitment domain family, member 9
involved_in
ISO
(MGI:5567862|PMID:24470469), (MGI:5919639|PMID:25621893)
RGD
PMID:24470469 PMID:25621893
MGI:5567862 MGI:5919639
NCBI chr 3:9,171,814...9,180,310
Ensembl chr 3:9,171,815...9,180,237
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Cd74
CD74 molecule
involved_in
ISO IEA
(PMID:19423618) GO_REF:0000107
RGD Ensembl
PMID:19423618
GO_REF:0000107
NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003
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Chia
chitinase, acidic
involved_in
ISS ISO
GO_REF:0000024 (PMID:18824549)
UniProt RGD
PMID:18824549
GO_REF:0000024
NCBI chr 2:193,614,374...193,656,532
Ensembl chr 2:193,614,114...193,656,533
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Csf1r
colony stimulating factor 1 receptor
involved_in
ISO IEA
(PMID:20829061) GO_REF:0000107
RGD Ensembl
PMID:20829061
GO_REF:0000107
NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
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Defb25
defensin beta 25
involved_in
ISO
(PMID:24955228)
RGD
PMID:24955228
NCBI chr 3:141,098,813...141,099,752
Ensembl chr 3:141,098,856...141,099,696
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Defb43
defensin beta 43
involved_in
ISO
(PMID:26649771)
RGD
PMID:26649771
NCBI chr15:37,271,888...37,276,782
Ensembl chr15:37,272,008...37,276,626
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Egr1
early growth response 1
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:1928025|PMID:11100120) GO_REF:0000107
UniProt RGD Ensembl
PMID:11100120
GO_REF:0000024 GO_REF:0000107 MGI:1928025
NCBI chr18:26,462,967...26,466,766
Ensembl chr18:26,462,981...26,466,766
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Eif2ak2
eukaryotic translation initiation factor 2-alpha kinase 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:5487533|PMID:20038207)
UniProt RGD
PMID:20038207
GO_REF:0000024 MGI:5487533
NCBI chr 6:16,189,000...16,224,972
Ensembl chr 6:16,188,979...16,224,971
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F2rl1
F2R like trypsin receptor 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3848267|PMID:19494303) (PMID:19494303), (PMID:21501162)
UniProt RGD
PMID:19494303 PMID:21501162
GO_REF:0000024 MGI:3848267
NCBI chr 2:26,772,274...26,785,226
Ensembl chr 2:26,772,278...26,785,226
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Ffar2
free fatty acid receptor 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:5575446|PMID:23665276)
UniProt RGD
PMID:23665276
GO_REF:0000024 MGI:5575446
NCBI chr 1:86,071,855...86,075,049
Ensembl chr 1:86,072,184...86,075,033
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Ffar3
free fatty acid receptor 3
involved_in
ISS ISO
GO_REF:0000024 (MGI:5575446|PMID:23665276)
UniProt RGD
PMID:23665276
GO_REF:0000024 MGI:5575446
NCBI chr 1:86,105,388...86,106,728
Ensembl chr 1:86,104,920...86,106,849
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Havcr2
hepatitis A virus cellular receptor 2
involved_in
ISO
UniProtKB:O08573 (MGI:4839671|PMID:20937702)
RGD
PMID:20937702
MGI:4839671
NCBI chr10:30,882,484...30,914,018
Ensembl chr10:30,882,606...30,909,137
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Ifng
interferon gamma
involved_in acts_upstream_of_or_within
ISO
(PMID:19423618) MGI:1857184 (PMID:12925700)
RGD
PMID:12925700 PMID:19423618
NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
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Il16
interleukin 16
acts_upstream_of_or_within
ISO
(MGI:6414686|PMID:30089723)
RGD
PMID:30089723
MGI:6414686
NCBI chr 1:137,617,702...137,718,022
Ensembl chr 1:137,617,944...137,718,130
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Il18
interleukin 18
IMP
RGD
PMID:19497959
RGD:4889403
NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
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Il1b
interleukin 1 beta
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:12925700)
Ensembl RGD
PMID:12925700
GO_REF:0000107
NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
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Il1rl1
interleukin 1 receptor-like 1
involved_in
IEA ISO
GO_REF:0000107 (MGI:4430159|PMID:19841166)
Ensembl RGD
PMID:19841166
GO_REF:0000107 MGI:4430159
NCBI chr 9:42,661,694...42,727,266
Ensembl chr 9:42,697,192...42,727,256
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Il33
interleukin 33
involved_in
ISO IEA
(PMID:19841166) GO_REF:0000107 (MGI:4430159|PMID:19841166)
RGD Ensembl
PMID:19841166
GO_REF:0000107 MGI:4430159
NCBI chr 1:227,701,964...227,736,374
Ensembl chr 1:227,721,435...227,736,373
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Il4
interleukin 4
involved_in
ISO
(MGI:85739|PMID:9013979)
RGD
PMID:9013979
MGI:85739
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
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Il4r
interleukin 4 receptor
involved_in
ISO
(MGI:4430159|PMID:19841166)
RGD
PMID:19841166
MGI:4430159
NCBI chr 1:180,115,061...180,139,981
Ensembl chr 1:180,115,120...180,139,980
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Il6
interleukin 6
involved_in
ISO
(PMID:10510402)
RGD
PMID:10510402
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
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Il6r
interleukin 6 receptor
involved_in
ISO IEA
(PMID:10510402) GO_REF:0000107
RGD Ensembl
PMID:10510402
GO_REF:0000107
NCBI chr 2:175,289,157...175,347,719
Ensembl chr 2:175,298,686...175,347,536
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Il7
interleukin 7
involved_in
IEA ISO
GO_REF:0000107 (PMID:11418668)
Ensembl RGD
PMID:11418668
GO_REF:0000107
NCBI chr 2:94,235,219...94,280,075
Ensembl chr 2:94,234,766...94,280,075
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Lbp
lipopolysaccharide binding protein
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857975 (PMID:12055258)
Ensembl RGD
PMID:12055258
GO_REF:0000107
NCBI chr 3:146,953,889...146,981,032
Ensembl chr 3:146,954,015...146,981,586
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Lgals9
galectin 9
involved_in
ISO
UniProtKB:Q8VIM0 (MGI:4839671|PMID:20937702)
RGD
PMID:20937702
MGI:4839671
NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045
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Lpl
lipoprotein lipase
involved_in
ISO
(PMID:25149060)
RGD
PMID:25149060
NCBI chr16:20,830,055...20,853,855
Ensembl chr16:20,829,465...20,855,249
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Mapk9
mitogen-activated protein kinase 9
IMP
Rat GRO/CINC-1
RGD
PMID:16942465
RGD:2304233
NCBI chr10:34,169,661...34,211,138
Ensembl chr10:34,169,675...34,210,178
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Mcoln2
mucolipin TRP cation channel 2
acts_upstream_of_or_within
ISO
MGI:5881907 (PMID:26432893)
RGD
PMID:26432893
NCBI chr 2:235,053,816...235,102,703
Ensembl chr 2:235,053,816...235,102,702
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Myd88
MYD88, innate immune signal transduction adaptor
acts_upstream_of_or_within
ISO
MGI:2147032 (PMID:12855817)
RGD
PMID:12855817
NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415
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P2ry2
purinergic receptor P2Y2
IDA
RGD
PMID:17947675
RGD:2316680
NCBI chr 1:155,352,050...155,367,423
Ensembl chr 1:155,351,165...155,367,632
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Pycard
PYD and CARD domain containing
involved_in
ISO
(PMID:21487011) (MGI:5448518|PMID:21487011)
RGD
PMID:21487011
MGI:5448518
NCBI chr 1:182,601,657...182,603,013
Ensembl chr 1:182,601,174...182,602,955
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Ripk2
receptor-interacting serine-threonine kinase 2
acts_upstream_of_or_within
ISO
MGI:2660793 (PMID:11894098)
RGD
PMID:11894098
NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657
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Selenok
selenoprotein K
involved_in
ISO
(MGI:4939970|PMID:21220695)
RGD
PMID:21220695
MGI:4939970
NCBI chr16:5,152,066...5,160,648
Ensembl chr16:5,152,066...5,159,188
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Ticam1
TIR domain containing adaptor molecule 1
acts_upstream_of_or_within
ISO
MGI:108005|MGI:3029019 (PMID:12855817)
RGD
PMID:12855817
NCBI chr 9:1,102,559...1,111,023
Ensembl chr 9:1,102,366...1,123,147
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Tlr2
toll-like receptor 2
involved_in acts_upstream_of_or_within
ISO
(PMID:19740627) MGI:2178675 (PMID:16239543)
RGD
PMID:16239543 PMID:19740627
NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
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Tlr3
toll-like receptor 3
involved_in acts_upstream_of_or_within
ISO
(PMID:19740627) MGI:3690535 (PMID:12855817)
RGD
PMID:12855817 PMID:19740627
NCBI chr16:46,821,980...46,837,900
Ensembl chr16:46,822,039...46,836,545
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Tlr4
toll-like receptor 4
involved_in
ISO
(PMID:19740627) (MGI:4456948|PMID:15356140)
RGD
PMID:15356140 PMID:19740627
MGI:4456948
NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
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Tlr7
toll-like receptor 7
involved_in
ISO
(PMID:19740627)
RGD
PMID:19740627
NCBI chr X:27,027,380...27,054,309
Ensembl chr X:27,027,425...27,054,754
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Tlr9
toll-like receptor 9
involved_in
ISO
(PMID:19740627)
RGD
PMID:19740627
NCBI chr 8:106,864,680...106,868,796
Ensembl chr 8:106,864,680...106,868,796
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Tnf
tumor necrosis factor
involved_in
ISO
(PMID:10490959)
RGD
PMID:10490959
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
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Tnfsf4
TNF superfamily member 4
involved_in
ISO
(MGI:4942253|PMID:12355440)
RGD
PMID:12355440
MGI:4942253
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
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Tslp
thymic stromal lymphopoietin
involved_in
ISO IBA
(PMID:11418668) GO_REF:0000033
RGD GO_Central
PMID:11418668
GO_REF:0000033
NCBI chr18:24,447,409...24,454,244
Ensembl chr18:24,449,844...24,453,548
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Wnt5a
Wnt family member 5A
involved_in
ISO IEA
(PMID:19520808) GO_REF:0000107
RGD Ensembl
PMID:19520808
GO_REF:0000107
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
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Tnf
tumor necrosis factor
involved_in
IDA
PMID:12729461
ARUK-UCL
PMID:12729461
RGD:13673777
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
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Mavs
mitochondrial antiviral signaling protein
involved_in
ISO
(PMID:16127453)
RGD
PMID:16127453
NCBI chr 3:118,451,650...118,466,094
Ensembl chr 3:118,451,743...118,466,094
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Hmgb1
high mobility group box 1
involved_in
IDA
PMID:10952726
UniProt
PMID:10952726
RGD:10054071
NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
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Mcoln2
mucolipin TRP cation channel 2
acts_upstream_of_or_within
ISO
MGI:5881907 (PMID:26432893)
RGD
PMID:26432893
NCBI chr 2:235,053,816...235,102,703
Ensembl chr 2:235,053,816...235,102,702
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Trpv4
transient receptor potential cation channel, subfamily V, member 4
involved_in
ISO
(MGI:5440106|PMID:23021218)
RGD
PMID:23021218
MGI:5440106
NCBI chr12:41,938,533...41,977,517
Ensembl chr12:41,938,560...41,977,517
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Adipoq
adiponectin, C1Q and collagen domain containing
involved_in
ISO ISS
(PMID:19524870) GO_REF:0000024
RGD UniProt
PMID:19524870
GO_REF:0000024
NCBI chr11:77,721,912...77,735,644
Ensembl chr11:77,721,912...77,735,564
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Ager
advanced glycosylation end product-specific receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 UniProtKB:P02638 (PMID:24995813)
Ensembl RGD
PMID:24995813
GO_REF:0000107
NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
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Cd84
CD84 molecule
involved_in
ISO IBA
(MGI:5700297|PMID:20628063) GO_REF:0000033
RGD GO_Central
PMID:20628063
GO_REF:0000033 MGI:5700297
NCBI chr13:84,327,580...84,367,153
Ensembl chr13:84,327,553...84,362,076
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Clec7a
C-type lectin domain containing 7A
involved_in
ISO
(PMID:25251945)
RGD
PMID:25251945
NCBI chr 4:162,902,731...162,913,931
Ensembl chr 4:162,902,732...162,913,897
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Hmgb1
high mobility group box 1
involved_in
ISO
(MGI:5913663|PMID:19264983)
RGD
PMID:19264983
MGI:5913663
NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
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Il1b
interleukin 1 beta
involved_in
ISO
(PMID:19524870)
RGD
PMID:19524870
NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
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Lgals9
galectin 9
involved_in
ISO
(PMID:24465902)
RGD
PMID:24465902
NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045
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Mcoln2
mucolipin TRP cation channel 2
acts_upstream_of_or_within
ISO
MGI:5881907 (PMID:26432893)
RGD
PMID:26432893
NCBI chr 2:235,053,816...235,102,703
Ensembl chr 2:235,053,816...235,102,702
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Mir92a1
microRNA 92a-1
involved_in
ISO
(PMID:24255059)
RGD
PMID:24255059
NCBI chr15:92,181,336...92,181,413
Ensembl chr15:92,181,336...92,181,413
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Mir92a2
microRNA 92a-2
involved_in
ISO
(PMID:24255059)
RGD
PMID:24255059
NCBI chr X:132,421,942...132,422,033
Ensembl chr X:132,421,942...132,422,033
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Nod2
nucleotide-binding oligomerization domain containing 2
involved_in
ISO
(MGI:5640951|PMID:16203728)
RGD
PMID:16203728
MGI:5640951
NCBI chr19:18,382,369...18,422,817
Ensembl chr19:18,382,439...18,417,177
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Oas1a
2'-5' oligoadenylate synthetase 1A
involved_in
ISO
(PMID:30822544)
RGD
PMID:30822544
NCBI chr12:35,669,798...35,680,505
Ensembl chr12:35,669,801...35,680,517
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Oas3
2'-5'-oligoadenylate synthetase 3
involved_in
ISO IEA
(PMID:30822544) GO_REF:0000107
RGD Ensembl
PMID:30822544
GO_REF:0000107
NCBI chr12:35,779,028...35,802,781
Ensembl chr12:35,779,022...35,802,781
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Selenok
selenoprotein K
involved_in
ISO
(MGI:4939970|PMID:21220695)
RGD
PMID:21220695
MGI:4939970
NCBI chr16:5,152,066...5,160,648
Ensembl chr16:5,152,066...5,159,188
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Syk
spleen associated tyrosine kinase
involved_in
ISO IEA
(PMID:25251945) GO_REF:0000107
RGD Ensembl
PMID:25251945
GO_REF:0000107
NCBI chr17:12,604,615...12,678,437
Ensembl chr17:12,604,619...12,661,410
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Trpv4
transient receptor potential cation channel, subfamily V, member 4
involved_in
ISO
(MGI:5440106|PMID:23021218)
RGD
PMID:23021218
MGI:5440106
NCBI chr12:41,938,533...41,977,517
Ensembl chr12:41,938,560...41,977,517
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Twist1
twist family bHLH transcription factor 1
involved_in
ISO
(PMID:20007935)
RGD
PMID:20007935
NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
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Myd88
MYD88, innate immune signal transduction adaptor
acts_upstream_of_or_within
ISO
MGI:4421295 (PMID:25084278)
RGD
PMID:25084278
NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415
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F2rl1
F2R like trypsin receptor 1
involved_in
ISO ISS
(PMID:21501162) GO_REF:0000024
RGD UniProt
PMID:21501162
GO_REF:0000024
NCBI chr 2:26,772,274...26,785,226
Ensembl chr 2:26,772,278...26,785,226
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Foxp1
forkhead box P1
involved_in
ISO
(PMID:18799727)
RGD
PMID:18799727
NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
G
Mcoln2
mucolipin TRP cation channel 2
acts_upstream_of_or_within
ISO
MGI:5881907 (PMID:26432893)
RGD
PMID:26432893
NCBI chr 2:235,053,816...235,102,703
Ensembl chr 2:235,053,816...235,102,702
G
Myd88
MYD88, innate immune signal transduction adaptor
acts_upstream_of_or_within
ISO
MGI:4421295 (PMID:25084278)
RGD
PMID:25084278
NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415
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Ackr1
atypical chemokine receptor 1
acts_upstream_of_or_within
ISO
MGI:1888977 (PMID:20643340)
RGD
PMID:20643340
NCBI chr13:85,782,396...85,784,015
Ensembl chr13:85,782,398...85,783,983
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Cxcl6
C-X-C motif chemokine ligand 6
acts_upstream_of_or_within
ISO
MGI:4819800 (PMID:20643340)
RGD
PMID:20643340
NCBI chr14:17,310,790...17,312,250
Ensembl chr14:17,310,426...17,313,093
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Mpl
MPL proto-oncogene, thrombopoietin receptor
acts_upstream_of_or_within
ISO
MGI:2660811 (PMID:20643340)
RGD
PMID:20643340
NCBI chr 5:131,973,895...131,987,472
Ensembl chr 5:131,973,895...131,986,797
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Snai2
snail family transcriptional repressor 2
involved_in
ISO
(PMID:21182836)
RGD
PMID:21182836
NCBI chr11:86,182,788...86,186,203
Ensembl chr11:86,181,909...86,186,200
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Zfpm1
zinc finger protein, multitype 1
acts_upstream_of_or_within
ISO
MGI:4421151 (PMID:20643340)
RGD
PMID:20643340
NCBI chr19:50,334,352...50,391,029
Ensembl chr19:50,334,682...50,390,591
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Trem2
triggering receptor expressed on myeloid cells 2
involved_in
ISO
ComplexPortal:CPX-1120 (MGI:6150565|PMID:29518356)
RGD
PMID:29518356
MGI:6150565
NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
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Kcnn4
potassium calcium-activated channel subfamily N member 4
IMP
RGD
PMID:25715999
RGD:401794570
NCBI chr 1:79,956,380...79,974,354
Ensembl chr 1:79,959,322...79,974,340
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Tnfsf18
TNF superfamily member 18
NOT|involved_in
ISO
(MGI:5551556|PMID:24107315)
RGD
PMID:24107315
MGI:5551556
NCBI chr13:73,833,478...73,907,249
Ensembl chr13:73,831,252...73,843,169
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