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ONTOLOGY REPORT - ANNOTATIONS


Term:trans-Golgi network membrane
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Accession:GO:0032588 term browser browse the term
Definition:The lipid bilayer surrounding any of the compartments that make up the trans-Golgi network.
Synonyms:related_synonym: Golgi trans face membrane


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trans-Golgi network membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aftph aftiphilin IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:104,921,633...104,975,763
Ensembl chr14:104,922,282...104,960,141
JBrowse link
G Arfip1 ADP-ribosylation factor interacting protein 1 ISO
IEA
IBA
(PMID:23695357)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:23695357, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 2:183,503,250...183,582,798
Ensembl chr 2:183,504,330...183,582,553
JBrowse link
G Arfip2 ADP-ribosylation factor interacting protein 2 ISO
IBA
(PMID:23695357)
PMID:21873635
RGD PMID:23695357, PMID:21873635 RGD:13792537 NCBI chr 1:170,464,995...170,471,138
Ensembl chr 1:170,466,395...170,471,076
JBrowse link
G Atp7b ATPase copper transporting beta IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:9837819)
Ensembl
UniProt
RGD
PMID:9837819 GO_REF:0000024 GO_REF:0000107 NCBI chr16:74,865,516...74,944,935
Ensembl chr16:74,865,516...74,945,286
JBrowse link
G Baiap3 BAI1-associated protein 3 ISO (PMID:28626000) RGD PMID:28626000 NCBI chr10:14,601,133...14,613,881
Ensembl chr10:14,599,197...14,613,878
JBrowse link
G Bok BCL2 family apoptosis regulator BOK ISS
ISO
GO_REF:0000024
(MGI:5705719|PMID:23429263)
UniProt
RGD
PMID:23429263 GO_REF:0000024 MGI:5705719 NCBI chr 9:100,829,593...100,840,498
Ensembl chr 9:100,829,552...100,840,504
JBrowse link
G Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 ISS
ISO
GO_REF:0000024
(MGI:3809386|PMID:18695242)
UniProt
RGD
PMID:18695242 GO_REF:0000024 MGI:3809386 NCBI chr17:90,191,119...90,218,013
Ensembl chr17:90,188,043...90,218,013
Ensembl chr 5:90,188,043...90,218,013
JBrowse link
G Cabp7 calcium binding protein 7 ISO (PMID:19338761)
(MGI:3840368|PMID:19338761)
RGD PMID:19338761 MGI:3840368 NCBI chr14:84,968,125...84,978,242
Ensembl chr14:84,968,130...84,978,255
JBrowse link
G Caln1 calneuron 1 ISO
IEA
(PMID:19338761)
(MGI:3840368|PMID:19338761)
GO_REF:0000107
RGD
Ensembl
PMID:19338761 GO_REF:0000107 MGI:3840368 NCBI chr12:29,307,117...29,796,996
Ensembl chr12:29,308,341...29,743,705
JBrowse link
G Clba1 clathrin binding box of aftiphilin containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:137,386,694...137,393,490
Ensembl chr 6:137,386,422...137,393,506
JBrowse link
G Clip3 CAP-GLY domain containing linker protein 3 ISS
ISO
GO_REF:0000024
(PMID:11854307), (PMID:15262990)
UniProt
RGD
PMID:11854307 PMID:15262990 GO_REF:0000024 NCBI chr 1:88,750,453...88,766,453
Ensembl chr 1:90,962,707...90,978,907
JBrowse link
G Fut9 fucosyltransferase 9 ISO
ISS
(PMID:18395013)
GO_REF:0000024
RGD
UniProt
PMID:18395013 GO_REF:0000024 NCBI chr 5:40,032,855...40,237,591
Ensembl chr 5:40,032,855...40,237,591
JBrowse link
G Gnas GNAS complex locus ISO (PMID:7997272) RGD PMID:7997272 NCBI chr 3:172,374,957...172,434,988
Ensembl chr 3:172,374,957...172,428,483
Ensembl chr 3:172,374,957...172,428,483
JBrowse link
G Kif13a kinesin family member 13A ISO (MGI:5142383|PMID:11106728) RGD PMID:11106728 MGI:5142383 NCBI chr17:18,151,582...18,335,027
Ensembl chr17:18,151,982...18,335,019
JBrowse link
G Lgr5 leucine rich repeat containing G protein coupled receptor 5 ISO
ISS
(PMID:23439653)
GO_REF:0000024
RGD
UniProt
PMID:23439653 GO_REF:0000024 NCBI chr 7:58,447,097...58,587,787
Ensembl chr 7:58,448,277...58,587,787
JBrowse link
G Llgl1 LLGL scribble cell polarity complex component 1 IDA PMID:21856246 UniProt PMID:21856246 RGD:8553614 NCBI chr10:46,940,873...46,955,524
Ensembl chr10:46,940,965...46,954,674
JBrowse link
G LOC108348122 CAP-Gly domain-containing linker protein 3 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:90,962,921...90,978,946
Ensembl chr 1:90,962,707...90,978,907
JBrowse link
G Marchf1 membrane associated ring-CH-type finger 1 ISO (MGI:4430128|PMID:19880452) RGD PMID:19880452 MGI:4430128 NCBI chr16:24,998,709...25,856,327
Ensembl chr16:25,001,666...25,192,675
JBrowse link
G Mmp24 matrix metallopeptidase 24 IEA
ISO
ISS
GO_REF:0000107
(MGI:5582176|PMID:14990567)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:14990567 GO_REF:0000024 GO_REF:0000107 MGI:5582176 NCBI chr 3:151,307,309...151,355,401
Ensembl chr 3:151,310,598...151,355,401
JBrowse link
G Myo1b myosin Ib colocalizes_with ISO (PMID:21666684) RGD PMID:21666684 NCBI chr 9:54,706,005...54,766,054
Ensembl chr 9:54,558,202...54,766,054
JBrowse link
G Nsg1 neuronal vesicle trafficking associated 1 IDA PMID:28874679 UniProt PMID:28874679 RGD:13432228 NCBI chr14:77,380,264...77,402,007
Ensembl chr14:77,380,262...77,401,996
JBrowse link
G Nsg2 neuronal vesicle trafficking associated 2 IDA PMID:28874679 UniProt PMID:28874679 RGD:13432228 NCBI chr10:15,867,885...15,928,169
Ensembl chr10:15,867,887...15,928,169
JBrowse link
G Pick1 protein interacting with PRKCA 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:120,465,472...120,484,824
Ensembl chr 7:120,465,130...120,484,840
JBrowse link
G Pld4 phospholipase D family, member 4 ISO
IBA
(MGI:4849851|PMID:21085684)
PMID:21873635
RGD PMID:21085684, PMID:21873635 MGI:4849851, RGD:13792537 NCBI chr 6:137,323,713...137,331,231
Ensembl chr 6:137,323,713...137,331,231
JBrowse link
G Rab31 RAB31, member RAS oncogene family IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(PMID:17678623)
Ensembl
UniProt
RGD
PMID:17678623, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 9:113,370,072...113,504,606
Ensembl chr 9:113,370,033...113,504,605
JBrowse link
G Scamp1 secretory carrier membrane protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:23,858,021...23,941,128
Ensembl chr 2:23,857,995...23,941,084
JBrowse link
G Scamp2 secretory carrier membrane protein 2 ISO
IBA
(PMID:15840657)
PMID:21873635
RGD PMID:15840657, PMID:21873635 RGD:13792537 NCBI chr 8:62,341,584...62,368,215
Ensembl chr 8:62,341,613...62,368,214
JBrowse link
G Scamp4 secretory carrier membrane protein 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,969,720...11,982,141
Ensembl chr 7:11,969,720...11,982,141
JBrowse link
G Scamp5 secretory carrier membrane protein 5 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:15840657)
Ensembl
RGD
PMID:15840657, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:62,221,820...62,266,269
Ensembl chr 8:62,220,892...62,248,017
JBrowse link
G St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 ISO (PMID:9182658) RGD PMID:9182658 NCBI chr 7:107,895,045...107,963,158
Ensembl chr 7:107,895,045...107,963,142
JBrowse link
G Stx6 syntaxin 6 IDA
ISO
PMID:9243506
(MGI:3840368|PMID:19338761)
RGD PMID:19338761, PMID:9243506 MGI:3840368, RGD:8553703 NCBI chr13:72,804,218...72,850,757
Ensembl chr13:72,804,218...72,852,967
JBrowse link
G Tepsin TEPSIN, adaptor related protein complex 4 accessory protein ISO (PMID:26542808) RGD PMID:26542808 NCBI chr10:109,271,161...109,278,745
Ensembl chr10:109,271,172...109,278,510
JBrowse link
G Tmem165 transmembrane protein 165 ISO
ISS
(PMID:23575229)
GO_REF:0000024
RGD
UniProt
PMID:23575229 GO_REF:0000024 NCBI chr14:34,503,037...34,528,262
Ensembl chr14:34,503,038...34,528,262
JBrowse link
G Tmem79 transmembrane protein 79 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:5518480|PMID:24060273)
UniProt
RGD
PMID:24060273, PMID:21873635 GO_REF:0000024 MGI:5518480, RGD:13792537 NCBI chr 2:187,701,522...187,706,452
Ensembl chr 2:187,697,509...187,706,321
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20615
    cellular anatomical entity 20304
      organelle subcompartment 1499
        Golgi apparatus subcompartment 697
          Golgi membrane 522
            trans-Golgi network membrane 34
Path 2
Term Annotations click to browse term
  cellular_component 20615
    cellular anatomical entity 20304
      organelle 13278
        membrane-bounded organelle 11263
          intracellular membrane-bounded organelle 10518
            Golgi apparatus 1430
              Golgi apparatus subcompartment 697
                Golgi membrane 522
                  trans-Golgi network membrane 34
paths to the root