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ONTOLOGY REPORT - ANNOTATIONS


Term:microvillus organization
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Accession:GO:0032528 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a microvillus, a thin cylindrical membrane-covered projection on the surface of a cell.
Synonyms:exact_synonym: microvillus organisation
 related_synonym: microvillus organization and biogenesis



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microvillus organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gldn gliomedin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4840020 (MGI:4839704|PMID:20188654)
Ensembl
RGD
PMID:20188654 GO_REF:0000107 MGI:4839704 NCBI chr 8:54,679,015...54,723,198
Ensembl chr 8:54,679,119...54,723,196
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 acts_upstream_of_or_within ISO MGI:3690333 (MGI:5588640|PMID:24675817) RGD PMID:24675817 MGI:5588640 NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925
JBrowse link
microvillar actin bundle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Espn espin involved_in ISO
IEA
(PMID:29572253)
GO_REF:0000107
RGD
Ensembl
PMID:29572253 GO_REF:0000107 NCBI chr 5:162,626,560...162,660,439
Ensembl chr 5:162,626,560...162,660,256
JBrowse link
G Myo1a myosin IA NAS RGD PMID:7779104 RGD:69898 NCBI chr 7:63,542,988...63,557,944
Ensembl chr 7:63,542,988...63,557,944
JBrowse link
microvillus assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ezr ezrin involved_in
NOT|involved_in
ISO (PMID:22797597)
UniProtKB:Q3V0K9|UniProtKB:Q62468 (MGI:5621262|PMID:22114352)
RGD PMID:22114352 PMID:22797597 MGI:5621262 NCBI chr 1:46,967,961...47,011,505
Ensembl chr 1:46,967,658...47,011,505
JBrowse link
G Klf5 Kruppel-like factor 5 acts_upstream_of ISO MGI:3038696 (MGI:2183884|PMID:12101409) RGD PMID:12101409 MGI:2183884 NCBI chr15:76,060,320...76,079,445
Ensembl chr15:76,064,258...76,079,445
JBrowse link
G Map4k4 mitogen-activated protein kinase kinase kinase kinase 4 NOT|involved_in ISO (PMID:22797597) RGD PMID:22797597 NCBI chr 9:42,200,708...42,326,708
Ensembl chr 9:42,200,278...42,326,698
JBrowse link
G Mink1 misshapen-like kinase 1 NOT|involved_in ISO (PMID:22797597) RGD PMID:22797597 NCBI chr10:55,278,293...55,330,782
Ensembl chr10:55,278,391...55,330,782
JBrowse link
G Myo1a myosin IA involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3587749 (MGI:3587467|PMID:15758024)
Ensembl
RGD
PMID:15758024 GO_REF:0000107 MGI:3587467 NCBI chr 7:63,542,988...63,557,944
Ensembl chr 7:63,542,988...63,557,944
JBrowse link
G Pls1 plastin 1 NOT|involved_in ISO UniProtKB:P26040|UniProtKB:Q62468 (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 8:96,316,703...96,426,592
Ensembl chr 8:96,317,849...96,385,195
JBrowse link
G Rap1a RAP1A, member of RAS oncogene family NOT|involved_in ISO (PMID:22797597) RGD PMID:22797597 NCBI chr 2:193,208,631...193,286,513
Ensembl chr 2:193,208,635...193,286,501
JBrowse link
G Rap1b RAP1B, member of RAS oncogene family NOT|involved_in ISO (PMID:22797597) RGD PMID:22797597 NCBI chr 7:53,423,039...53,456,388
Ensembl chr 7:53,423,130...53,456,370
JBrowse link
G Rap2a RAP2A, member of RAS oncogene family involved_in ISO (PMID:22797597) RGD PMID:22797597 NCBI chr15:97,596,848...97,597,338
Ensembl chr15:97,596,020...97,624,138
JBrowse link
G Rap2b RAP2B, member of RAS oncogene family NOT|involved_in ISO (PMID:22797597) RGD PMID:22797597 NCBI chr 2:145,599,714...145,600,265
Ensembl chr 2:145,599,116...145,603,069
JBrowse link
G Rap2c RAP2C, member of RAS oncogene family NOT|involved_in ISO (PMID:22797597) RGD PMID:22797597 NCBI chr  X:130,504,554...130,517,671
Ensembl chr  X:130,504,698...130,518,328
JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 involved_in ISO UniProtKB:Q8TEU7 (PMID:22797597) RGD PMID:22797597 NCBI chr 2:164,207,513...164,322,157
Ensembl chr 2:164,207,513...164,244,247
JBrowse link
G Rapgef6 Rap guanine nucleotide exchange factor 6 involved_in ISO UniProtKB:Q9Y4G8 (PMID:22797597) RGD PMID:22797597 NCBI chr10:38,655,854...38,824,227
Ensembl chr10:38,655,867...38,823,211
JBrowse link
G Rdx radixin acts_upstream_of_or_within ISO MGI:2671151 (MGI:2181857|PMID:12068294) RGD PMID:12068294 MGI:2181857 NCBI chr 8:52,379,494...52,437,673
Ensembl chr 8:52,379,494...52,437,678
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 involved_in ISO (PMID:20937695) RGD PMID:20937695 NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598
JBrowse link
G Stk26 serine/threonine kinase 26 involved_in ISO (PMID:22797597) RGD PMID:22797597 NCBI chr  X:130,310,855...130,375,677
Ensembl chr  X:130,310,885...130,374,291
JBrowse link
G Stx2 syntaxin 2 IDA RGD PMID:12464668 RGD:1298909 NCBI chr12:27,678,744...27,714,751
Ensembl chr12:27,689,819...27,714,751
JBrowse link
G Tnik TRAF2 and NCK interacting kinase involved_in ISO (PMID:22797597) RGD PMID:22797597 NCBI chr 2:111,184,352...111,587,993
Ensembl chr 2:111,184,387...111,580,750
JBrowse link
G Vil1 villin 1 NOT|involved_in ISO UniProtKB:P26040|UniProtKB:Q3V0K9 (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 9:75,991,141...76,018,860
Ensembl chr 9:75,991,141...76,018,858
JBrowse link
negative regulation of microvillus assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rap1gap Rap1 GTPase-activating protein involved_in ISO (PMID:22797597) RGD PMID:22797597 NCBI chr 5:149,873,987...149,939,254
Ensembl chr 5:149,892,019...149,939,253
JBrowse link
regulation of microvillus assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp8b1 ATPase phospholipid transporting 8B1 involved_in ISO (PMID:20512993) RGD PMID:20512993 NCBI chr18:58,016,382...58,157,213
Ensembl chr18:58,018,268...58,157,396
JBrowse link
G Fscn1 fascin actin-bundling protein 1 involved_in ISO
ISS
IEA
(PMID:9571235)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:9571235 GO_REF:0000024 GO_REF:0000107 NCBI chr12:11,597,042...11,610,183
Ensembl chr12:11,597,048...11,610,211
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IMP RGD PMID:17178913 RGD:2301840 NCBI chr 3:152,186,787...152,248,320
Ensembl chr 3:152,186,787...152,248,320
JBrowse link
G Klf5 Kruppel-like factor 5 acts_upstream_of ISO MGI:3806635 (MGI:5471906|PMID:23266329) RGD PMID:23266329 MGI:5471906 NCBI chr15:76,060,320...76,079,445
Ensembl chr15:76,064,258...76,079,445
JBrowse link
G Pld1 phospholipase D1 involved_in IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:22797597)
Ensembl
RGD
PMID:22797597 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 2:110,849,205...111,047,692
Ensembl chr 2:110,893,608...111,047,692
JBrowse link
G Podxl podocalyxin-like involved_in IBA
ISO
ISS
PMID:21873635
(MGI:4456941|PMID:17311105)
GO_REF:0000024
RGD
UniProt
PMID:17311105 PMID:21873635 GO_REF:0000024 MGI:4456941, RGD:13792537 NCBI chr 4:60,135,124...60,181,829
Ensembl chr 4:60,135,109...60,181,899
JBrowse link
regulation of microvillus length term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdhr2 cadherin-related family member 2 involved_in ISO (PMID:24725409) RGD PMID:24725409 NCBI chr17:9,876,853...9,913,356
Ensembl chr17:9,876,860...9,912,575
JBrowse link
G Cdhr5 cadherin-related family member 5 involved_in ISS
ISO
GO_REF:0000024
(PMID:24725409)
UniProt
RGD
PMID:24725409 GO_REF:0000024 NCBI chr 1:196,373,110...196,381,609
Ensembl chr 1:196,373,112...196,381,543
JBrowse link
G Ezr ezrin involved_in ISO UniProtKB:Q3V0K9|UniProtKB:Q62468 (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 1:46,967,961...47,011,505
Ensembl chr 1:46,967,658...47,011,505
JBrowse link
G Pls1 plastin 1 involved_in ISO UniProtKB:P26040|UniProtKB:Q62468 (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 8:96,316,703...96,426,592
Ensembl chr 8:96,317,849...96,385,195
JBrowse link
G Ush1c USH1 protein network component harmonin involved_in ISO (MGI:5578666|PMID:24725409) RGD PMID:24725409 MGI:5578666 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671
JBrowse link
G Vil1 villin 1 involved_in ISO UniProtKB:P26040|UniProtKB:Q3V0K9 (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 9:75,991,141...76,018,860
Ensembl chr 9:75,991,141...76,018,858
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19390
    cellular process 18252
      cellular component organization or biogenesis 6492
        cellular component organization 6250
          cell projection organization 1747
            plasma membrane bounded cell projection organization 1708
              microvillus organization 31
                follicle cell microvillus organization + 0
                microvillus assembly + 26
                regulation of microvillus organization + 13
paths to the root