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ONTOLOGY REPORT - ANNOTATIONS


Term:response to peptidoglycan
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Accession:GO:0032494 term browser browse the term
Definition:Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule.



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response to peptidoglycan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5AR1 complement C5a receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3814295|PMID:17114491) Ensembl
Ensembl
MGI
PMID:17114491 GO_REF:0000107 MGI:3814295 NCBI chr19:47,307,477...47,322,066
Ensembl chr19:47,290,023...47,322,066
JBrowse link
G CARD9 caspase recruitment domain family member 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3697751|PMID:17187069) Ensembl
Ensembl
MGI
PMID:17187069 GO_REF:0000107 MGI:3697751 NCBI chr 9:136,363,956...136,373,669
Ensembl chr 9:136,363,956...136,373,681
JBrowse link
G IL6 interleukin 6 involved_in NAS (PMID:16034137) BHF-UCL
BHF-UCL
PMID:16034137 NCBI chr 7:22,727,200...22,731,998
Ensembl chr 7:22,725,884...22,732,002
JBrowse link
G INAVA innate immunity activator involved_in IMP (PMID:28436939) UniProt
UniProt
PMID:28436939 NCBI chr 1:200,891,531...200,915,742
Ensembl chr 1:200,891,048...200,915,742
JBrowse link
G IRAK1 interleukin 1 receptor associated kinase 1 acts_upstream_of_or_within ISO (MGI:2178646|PMID:10549626) MGI PMID:10549626 MGI:2178646 NCBI chr  X:154,010,507...154,019,902
Ensembl chr  X:154,010,506...154,019,902
JBrowse link
G IRAK3 interleukin 1 receptor associated kinase 3 involved_in ISS
IEA
(PMID:12150927) BHF-UCL
Ensembl
BHF-UCL
PMID:12150927 GO_REF:0000107 NCBI chr12:66,189,214...66,254,622
Ensembl chr12:66,189,195...66,254,622
JBrowse link
G IRF5 interferon regulatory factor 5 involved_in IDA (PMID:22412986) BHF-UCL
BHF-UCL
PMID:22412986 NCBI chr 7:128,937,032...128,950,038
Ensembl chr 7:128,937,457...128,950,038
JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3640248|PMID:10607756) Ensembl
Ensembl
MGI
PMID:10607756 GO_REF:0000107 MGI:3640248 NCBI chr 3:38,138,661...38,143,022
Ensembl chr 3:38,138,478...38,143,022
JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3050756|PMID:15220916) MGI
Ensembl
PMID:15220916 GO_REF:0000107 MGI:3050756 NCBI chr16:50,693,606...50,733,075
Ensembl chr16:50,693,588...50,734,041
JBrowse link
G TLR2 toll like receptor 2 acts_upstream_of_or_within ISO (MGI:3814295|PMID:17114491)
(MGI:2178646|PMID:10549626)
MGI PMID:10549626 PMID:17114491 MGI:2178646 MGI:3814295 NCBI chr 4:153,684,280...153,710,637
Ensembl chr 4:153,684,070...153,706,260
JBrowse link
cellular response to peptidoglycan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAMP cathelicidin antimicrobial peptide involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:19879657 GO_REF:0000107 RGD:2316237 NCBI chr 3:48,223,495...48,225,485
Ensembl chr 3:48,223,347...48,225,491
JBrowse link
G DEFB124 defensin beta 124 involved_in IDA
IBA
(PMID:24955228)
(PMID:21873635)
UniProt
GO_Central
UniProt
GO_Central
PMID:21873635 PMID:24955228 NCBI chr20:31,465,471...31,475,127
Ensembl chr20:31,465,471...31,476,757
JBrowse link
G NLRP3 NLR family pyrin domain containing 3 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:247,416,077...247,448,817
Ensembl chr 1:247,416,156...247,449,108
JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3686795|PMID:16949315) Ensembl
Ensembl
MGI
RGD
PMID:16949315 PMID:24169446 GO_REF:0000107 MGI:3686795 RGD:13204728 NCBI chr16:50,693,606...50,733,075
Ensembl chr16:50,693,588...50,734,041
JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit involved_in IMP (PMID:24955228) UniProt
UniProt
PMID:24955228 NCBI chr11:65,653,601...65,662,916
Ensembl chr11:65,653,599...65,663,090
JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2176422|PMID:11894098) Ensembl
Ensembl
MGI
PMID:11894098 GO_REF:0000107 MGI:2176422 NCBI chr 8:89,757,816...89,791,064
Ensembl chr 8:89,757,806...89,791,064
JBrowse link
G TLR2 toll like receptor 2 acts_upstream_of_or_within ISO (MGI:3686795|PMID:16949315) MGI PMID:16949315 MGI:3686795 NCBI chr 4:153,684,280...153,710,637
Ensembl chr 4:153,684,070...153,706,260
JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:41,158,508...41,163,116
Ensembl chr 6:41,158,506...41,163,186
JBrowse link
detection of muramyl dipeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NOD2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within
IDA (PMID:15998797)
(PMID:12527755)
HGNC-UCL
MGI
HGNC-UCL
MGI
PMID:12527755 PMID:15998797 NCBI chr16:50,693,606...50,733,075
Ensembl chr16:50,693,588...50,734,041
JBrowse link
detection of peptidoglycan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TREM2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:41,158,508...41,163,116
Ensembl chr 6:41,158,506...41,163,186
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19656
    response to stimulus 10120
      response to chemical 5532
        response to oxygen-containing compound 2494
          response to peptidoglycan 16
            cellular response to peptidoglycan 8
            detection of peptidoglycan + 2
Path 2
Term Annotations click to browse term
  biological_process 19656
    response to stimulus 10120
      response to biotic stimulus 1977
        response to external biotic stimulus 1928
          response to other organism 1925
            response to bacterium 1114
              response to molecule of bacterial origin 577
                response to peptidoglycan 16
                  cellular response to peptidoglycan 8
                  detection of peptidoglycan + 2
paths to the root