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ONTOLOGY REPORT - ANNOTATIONS


Term:response to peptidoglycan
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Accession:GO:0032494 term browser browse the term
Definition:Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule.


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response to peptidoglycan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5ar1 complement C5a receptor 1 acts_upstream_of_or_within ISO MGI:1934246 (MGI:3814295|PMID:17114491) RGD PMID:17114491 MGI:3814295 NCBI chr 1:76,948,622...76,959,826 JBrowse link
G Card9 caspase recruitment domain family, member 9 acts_upstream_of_or_within ISO MGI:3698412 (MGI:3697751|PMID:17187069) RGD PMID:17187069 MGI:3697751 NCBI chr 3:9,171,814...9,180,310
Ensembl chr 3:9,171,815...9,180,237
JBrowse link
G Inava innate immunity activator involved_in ISO (PMID:28436939) RGD PMID:28436939 NCBI chr13:47,666,446...47,687,383
Ensembl chr13:47,666,447...47,686,729
JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 acts_upstream_of_or_within ISO (MGI:2178646|PMID:10549626) RGD PMID:10549626 MGI:2178646 NCBI chr  X:151,768,621...151,778,521
Ensembl chr  X:151,768,777...151,778,521
JBrowse link
G Irak3 interleukin-1 receptor-associated kinase 3 involved_in ISO (MGI:2183694|PMID:12150927) RGD PMID:12150927 MGI:2183694 NCBI chr 7:55,653,949...55,714,371
Ensembl chr 7:55,653,962...55,713,121
JBrowse link
G Irf5 interferon regulatory factor 5 involved_in ISO (PMID:22412986) RGD PMID:22412986 NCBI chr 4:58,127,577...58,140,665
Ensembl chr 4:58,127,640...58,139,267
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor acts_upstream_of_or_within ISO MGI:2385681 (MGI:3640248|PMID:10607756) RGD PMID:10607756 MGI:3640248 NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 acts_upstream_of_or_within ISO MGI:2680581 (MGI:3050756|PMID:15220916) RGD PMID:15220916 MGI:3050756 NCBI chr19:18,379,720...18,422,817
Ensembl chr19:18,382,439...18,417,177
JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO MGI:2178675|MGI:2674036 (MGI:2178646|PMID:10549626), (MGI:3814295|PMID:17114491) RGD PMID:10549626 PMID:17114491 MGI:2178646 MGI:3814295 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
JBrowse link
cellular response to peptidoglycan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camp cathelicidin antimicrobial peptide IEP RGD PMID:19879657 RGD:2316237 NCBI chr 8:109,841,729...109,843,543
Ensembl chr 8:109,841,729...109,843,543
JBrowse link
G Defb25 defensin beta 25 involved_in IBA
ISO
PMID:21873635
(PMID:24955228)
RGD PMID:24955228 PMID:21873635 RGD:13792537 NCBI chr 3:141,098,856...141,099,696
Ensembl chr 3:141,098,856...141,099,696
JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 involved_in ISO (MGI:5790524|PMID:27374331) RGD PMID:27374331 MGI:5790524 NCBI chr10:44,326,770...44,353,814
Ensembl chr10:44,328,566...44,352,811
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 acts_upstream_of_or_within IEP
ISO
MGI:2680581 (MGI:3686795|PMID:16949315) RGD PMID:16949315 PMID:24169446 MGI:3686795, RGD:13204728 NCBI chr19:18,379,720...18,422,817
Ensembl chr19:18,382,439...18,417,177
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO (PMID:24955228) RGD PMID:24955228 NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484
JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of_or_within ISO MGI:2660793 (MGI:2176422|PMID:11894098) RGD PMID:11894098 MGI:2176422 NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657
JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO (MGI:3686795|PMID:16949315) RGD PMID:16949315 MGI:3686795 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:5572888|PMID:12847223) RGD PMID:12847223 MGI:5572888 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
JBrowse link
detection of muramyl dipeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide-binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within
ISO (PMID:15998797)
(PMID:12527755)
RGD PMID:12527755 PMID:15998797 NCBI chr19:18,379,720...18,422,817
Ensembl chr19:18,382,439...18,417,177
JBrowse link
detection of peptidoglycan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:5572888|PMID:12847223) RGD PMID:12847223 MGI:5572888 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    response to stimulus 10358
      response to chemical 6187
        response to oxygen-containing compound 2363
          response to peptidoglycan 15
            cellular response to peptidoglycan 8
            detection of peptidoglycan + 2
Path 2
Term Annotations click to browse term
  biological_process 19492
    response to stimulus 10358
      response to biotic stimulus 1730
        response to external biotic stimulus 1691
          response to other organism 1687
            response to bacterium 1040
              response to molecule of bacterial origin 543
                response to peptidoglycan 15
                  cellular response to peptidoglycan 8
                  detection of peptidoglycan + 2
paths to the root