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ONTOLOGY REPORT - ANNOTATIONS


Term:detection of molecule of bacterial origin
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Accession:GO:0032490 term browser browse the term
Definition:The series of events in which a stimulus from a molecule of bacterial origin is received and converted into a molecular signal.
Synonyms:exact_synonym: detection of bacteria associated molecule;   detection of bacterial associated molecule;   detection of bacterium associated molecule



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detection of molecule of bacterial origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C4b complement C4B (Chido blood group) involved_in ISO (PMID:22333221) RGD PMID:22333221 NCBI chr20:4,197,371...4,211,684
Ensembl chr20:4,197,366...4,211,681
JBrowse link
G Lbp lipopolysaccharide binding protein involved_in ISO (PMID:11528597) RGD PMID:11528597 NCBI chr 3:146,953,889...146,981,032
Ensembl chr 3:146,954,015...146,981,586
JBrowse link
detection of bacterial lipoprotein term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmbt1 deleted in malignant brain tumors 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:185,617,469...185,696,476
Ensembl chr 1:185,617,294...185,696,478
JBrowse link
G Ssc5d scavenger receptor cysteine rich family member with 5 domains involved_in IBA
ISO
PMID:21873635
(MGI:4939978|PMID:21217009)
RGD PMID:21217009 PMID:21873635 MGI:4939978, RGD:13792537 NCBI chr 1:68,891,942...68,910,462
Ensembl chr 1:68,891,949...68,909,743
JBrowse link
detection of diacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO (PMID:19931471) RGD PMID:19931471 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
JBrowse link
G Tlr6 toll-like receptor 6 acts_upstream_of_or_within ISO (PMID:19931471) RGD PMID:19931471 NCBI chr14:43,362,164...43,374,500
Ensembl chr14:43,362,164...43,375,685
JBrowse link
detection of lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ly96 lymphocyte antigen 96 involved_in ISO (PMID:19252480) RGD PMID:19252480 NCBI chr 5:2,582,233...2,612,357
Ensembl chr 5:2,582,254...2,612,386
JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in ISO (PMID:12651854) RGD PMID:12651854 NCBI chr12:31,296,143...31,362,649
Ensembl chr12:31,296,156...31,362,647
JBrowse link
G Tlr4 toll-like receptor 4 involved_in ISO
ISS
IEA
(PMID:19252480)
GO_REF:0000024
(MGI:5913054|PMID:28098138)
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:19252480 PMID:28098138 GO_REF:0000024 GO_REF:0000107 MGI:5913054 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:5572888|PMID:12847223) RGD PMID:12847223 MGI:5572888 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
JBrowse link
detection of lipoteichoic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:5572888|PMID:12847223) RGD PMID:12847223 MGI:5572888 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
JBrowse link
detection of muramyl dipeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide-binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within
ISO (PMID:15998797)
(PMID:12527755)
RGD PMID:12527755 PMID:15998797 NCBI chr19:18,379,720...18,422,817
Ensembl chr19:18,382,439...18,417,177
JBrowse link
detection of peptidoglycan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:5572888|PMID:12847223) RGD PMID:12847223 MGI:5572888 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
JBrowse link
detection of triacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr1 toll-like receptor 1 acts_upstream_of_or_within ISO (PMID:19931471) RGD PMID:19931471 NCBI chr14:43,384,127...43,396,765
Ensembl chr14:43,384,932...43,397,125
JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO (PMID:19931471) RGD PMID:19931471 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18737
    response to stimulus 10209
      response to chemical 6156
        detection of chemical stimulus 1376
          detection of molecule of bacterial origin 12
            detection of bacterial lipoprotein + 5
            detection of lipopolysaccharide 4
            detection of lipoteichoic acid 1
            detection of peptidoglycan + 2
Path 2
Term Annotations click to browse term
  biological_process 18737
    response to stimulus 10209
      response to biotic stimulus 1735
        response to external biotic stimulus 1693
          response to other organism 1689
            response to bacterium 1010
              response to molecule of bacterial origin 552
                detection of molecule of bacterial origin 12
                  detection of bacterial lipoprotein + 5
                  detection of lipopolysaccharide 4
                  detection of lipoteichoic acid 1
                  detection of peptidoglycan + 2
paths to the root