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ONTOLOGY REPORT - ANNOTATIONS

Term:melanosome organization
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Accession:GO:0032438 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a melanosome. A melanosome is a tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored.
Synonyms:exact_synonym: melanosome organisation
 related_synonym: melanosome organization and biogenesis


show annotations for term's descendants           Sort by:
melanosome organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP1M1 adaptor related protein complex 1 subunit mu 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:46,261,799...46,290,387
Ensembl chr20:46,261,803...46,290,342 		JBrowse link
G AP3B1 adaptor related protein complex 3 subunit beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9931340) Ensembl
MGI		 PMID:9931340 GO_REF:0000107 NCBI chr 3:28,481,974...28,748,095
Ensembl chr 3:28,481,038...28,751,258 		JBrowse link
G APOE apolipoprotein E involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:110,525,717...110,528,534
Ensembl chr 1:110,525,722...110,528,440 		JBrowse link
G ASIP agouti signaling protein involved_in
acts_upstream_of_or_within		 IBA
ISO
IEA		 (PMID:9548375) GO_Central
MGI
TreeGrafter		 PMID:9548375 GO_REF:0000033 GO_REF:0000118 NCBI chr24:23,338,757...23,393,913
Ensembl chr24:23,354,888...23,393,896 		JBrowse link
G BACE2 beta-secretase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:35,714,003...35,760,686
Ensembl chr31:35,713,149...35,760,681 		JBrowse link
G BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15265785) Ensembl
MGI		 PMID:15265785 GO_REF:0000107 NCBI chr 1:110,325,351...110,328,226
Ensembl chr 1:110,326,843...110,327,442 		JBrowse link
G BLOC1S4 biogenesis of lysosomal organelles complex 1 subunit 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11110696) Ensembl
MGI		 PMID:11110696 GO_REF:0000107 NCBI chr 3:58,822,405...58,823,770
Ensembl chr 3:58,822,482...58,823,138 		JBrowse link
G GPR143 G protein-coupled receptor 143 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:6,438,068...6,479,731
Ensembl chr  X:6,437,660...6,474,447 		JBrowse link
G KIF13A kinesin family member 13A involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:16,621,581...16,748,500
Ensembl chr35:16,598,425...16,748,485 		JBrowse link
G LYST lysosomal trafficking regulator acts_upstream_of_or_within ISO (PMID:4634048)
(PMID:16518687)		 MGI PMID:4634048 PMID:16518687 NCBI chr 4:4,106,869...4,296,042
Ensembl chr 4:4,089,837...4,294,593 		JBrowse link
G PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr37:16,537,095...16,620,427
Ensembl chr37:16,541,562...16,619,554 		JBrowse link
G PMEL premelanosome protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:292,595...327,618
Ensembl chr10:292,597...300,098 		JBrowse link
G SHROOM2 shroom family member 2 involved_in ISO (MGI:3710716|PMID:16987870) UniProt PMID:16987870 MGI:3710716 NCBI chr  X:6,499,570...6,642,738
Ensembl chr  X:6,499,354...6,641,946 		JBrowse link
G TYRP1 tyrosinase related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9548375) TreeGrafter
MGI		 PMID:9548375 GO_REF:0000118 NCBI chr11:33,317,084...33,336,029
Ensembl chr11:33,317,121...33,335,498 		JBrowse link
melanosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB6 ATP binding cassette subfamily B member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:25,760,478...25,767,753
Ensembl chr37:25,760,477...25,769,841 		JBrowse link
G HPS1 HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr28:11,547,457...11,572,248
Ensembl chr28:11,547,741...11,571,613 		JBrowse link
G HPS4 HPS4 biogenesis of lysosomal organelles complex 3 subunit 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr26:20,131,658...20,157,532
Ensembl chr26:19,933,281...20,157,058 		JBrowse link
G RAB32 RAB32, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:37,706,809...37,719,044
Ensembl chr 1:37,712,142...37,718,266 		JBrowse link
G RAB38 RAB38, member RAS oncogene family involved_in ISO (PMID:23084991)
(PMID:22511774)		 UniProt
ParkinsonsUK-UCL		 PMID:22511774 PMID:23084991 NCBI chr21:11,769,924...11,823,546
Ensembl chr21:11,769,351...11,822,815 		JBrowse link
regulation of melanosome organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPR143 G protein-coupled receptor 143 involved_in ISO (MGI:3813974|PMID:18697795) UniProt PMID:18697795 MGI:3813974 NCBI chr  X:6,438,068...6,479,731
Ensembl chr  X:6,437,660...6,474,447 		JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 involved_in ISO (MGI:5574413|PMID:24769727) BHF-UCL PMID:24769727 MGI:5574413 NCBI chr19:46,419,812...46,541,888
Ensembl chr19:46,423,998...46,542,122 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17878
    cellular process 16920
      cellular pigmentation 43
        pigment granule organization 21
          melanosome organization 20
            melanosome assembly 5
            negative regulation of melanosome organization 0
            positive regulation of melanosome organization 0
            regulation of melanosome organization + 2
Path 2
Term Annotations click to browse term
  biological_process 17878
    cellular process 16920
      cellular component organization or biogenesis 6943
        cellular component organization 6704
          organelle organization 3754
            vesicle organization 359
              pigment granule organization 21
                melanosome organization 20
                  melanosome assembly 5
                  negative regulation of melanosome organization 0
                  positive regulation of melanosome organization 0
                  regulation of melanosome organization + 2
paths to the root