Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:melanosome localization
go back to main search page
Accession:GO:0032400 term browser browse the term
Definition:Any process in which a melanosome is transported to, and/or maintained in, a specific location within the cell.
Synonyms:exact_synonym: melanosome localisation

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
melanosome localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr143 G protein-coupled receptor 143 involved_in ISO (PMID:19717472) UniProt PMID:19717472 NCBI chrNW_004624834:7,281,962...7,329,484
Ensembl chrNW_004624834:7,295,069...7,308,920 		JBrowse link
G Mlph melanophilin acts_upstream_of_or_within ISO (PMID:14730011)
(PMID:11886590), (PMID:11887186)		 MGI PMID:11886590 PMID:11887186 PMID:14730011 NCBI chrNW_004624847:2,919,391...2,958,459
Ensembl chrNW_004624847:2,919,404...2,958,554 		JBrowse link
G Mreg melanoregulin involved_in ISO (PMID:22940130) UniProt PMID:22940130 NCBI chrNW_004624765:4,139...38,006
Ensembl chrNW_004624765:4,140...36,386 		JBrowse link
G Myo5a myosin VA acts_upstream_of_or_within ISO (PMID:14730011)
(PMID:11266470), (PMID:8962090)		 MGI PMID:8962090 PMID:11266470 PMID:14730011 NCBI chrNW_004624731:8,114,557...8,280,586
Ensembl chrNW_004624731:8,113,715...8,280,823 		JBrowse link
G Rab27a RAB27A, member RAS oncogene family involved_in ISO (PMID:15357836) UniProt PMID:15357836 NCBI chrNW_004624731:6,315,064...6,355,431
Ensembl chrNW_004624731:6,319,092...6,355,534 		JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:22,458,098...22,478,735
Ensembl chrNW_004624747:22,461,346...22,478,867 		JBrowse link
G Vps33b VPS33B late endosome and lysosome associated involved_in ISO (PMID:15790593) UniProt PMID:15790593 NCBI chrNW_004624768:17,221,809...17,264,264
Ensembl chrNW_004624768:17,244,002...17,264,441 		JBrowse link
melanosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asip agouti signaling protein acts_upstream_of_or_within ISO (PMID:9548375) MGI PMID:9548375 NCBI chrNW_004624842:5,079,499...5,084,933
Ensembl chrNW_004624842:5,079,499...5,084,933 		JBrowse link
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 involved_in ISO (PMID:17182842) UniProt PMID:17182842 NCBI chrNW_004624756:17,595,404...17,628,972
Ensembl chrNW_004624756:17,595,470...17,631,433 		JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in ISO (PMID:17182842) UniProt PMID:17182842 NCBI chrNW_004624731:13,775,414...13,789,380
Ensembl chrNW_004624731:13,777,656...13,785,366 		JBrowse link
G Dctn1 dynactin subunit 1 acts_upstream_of_or_within ISO (PMID:22275436) MGI PMID:22275436 NCBI chrNW_004624749:29,105,310...29,135,124
Ensembl chrNW_004624749:29,115,561...29,137,276 		JBrowse link
G Dctn2 dynactin subunit 2 acts_upstream_of_or_within ISO (PMID:22275436) MGI PMID:22275436 NCBI chrNW_004624802:10,412,466...10,429,354 JBrowse link
G Gpr143 G protein-coupled receptor 143 involved_in ISO (PMID:19717472) UniProt PMID:19717472 NCBI chrNW_004624834:7,281,962...7,329,484
Ensembl chrNW_004624834:7,295,069...7,308,920 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 ISO positive regulation of bidirectional melanosome transport along microtubules RGD PMID:15753041 RGD:2293208 NCBI chrNW_004624781:6,222,365...6,285,398
Ensembl chrNW_004624781:6,222,365...6,285,531 		JBrowse link
G Mreg melanoregulin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22275436) TreeGrafter
MGI
InterPro		 PMID:22275436 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624765:4,139...38,006
Ensembl chrNW_004624765:4,140...36,386 		JBrowse link
G Myo5a myosin VA acts_upstream_of_or_within ISO (PMID:24721909)
(PMID:9548375)
(PMID:11266473)
(PMID:9133672)		 MGI PMID:9133672 PMID:9548375 PMID:11266473 PMID:24721909 NCBI chrNW_004624731:8,114,557...8,280,586
Ensembl chrNW_004624731:8,113,715...8,280,823 		JBrowse link
G Rab11a RAB11A, member RAS oncogene family involved_in ISO (PMID:21291502) UniProt PMID:21291502 NCBI chrNW_004624781:6,699,926...6,718,020
Ensembl chrNW_004624781:6,699,926...6,718,545 		JBrowse link
G Rab11b RAB11B, member RAS oncogene family involved_in ISO (PMID:21291502) UniProt PMID:21291502 NCBI chrNW_004624828:1,165,877...1,174,306
Ensembl chrNW_004624828:1,165,327...1,174,417 		JBrowse link
G Rab1a RAB1A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:8,420,336...8,448,478
Ensembl chrNW_004624762:8,420,305...8,449,647 		JBrowse link
G Rab27a RAB27A, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:11266473) MGI PMID:11266473 NCBI chrNW_004624731:6,315,064...6,355,431
Ensembl chrNW_004624731:6,319,092...6,355,534 		JBrowse link
positive regulation of melanosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh3 cadherin 3 involved_in ISO (PMID:23334344) UniProt PMID:23334344 NCBI chrNW_004624746:17,616,296...17,659,021
Ensembl chrNW_004624746:17,616,940...17,658,548 		JBrowse link
regulation of melanosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr143 G protein-coupled receptor 143 involved_in ISO (PMID:18697795) UniProt PMID:18697795 NCBI chrNW_004624834:7,281,962...7,329,484
Ensembl chrNW_004624834:7,295,069...7,308,920 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17650
    cellular process 17226
      cellular pigmentation 41
        pigment granule localization 18
          melanosome localization 17
            establishment of melanosome localization + 14
            melanosome transport + 14
Path 2
Term Annotations click to browse term
  biological_process 17650
    localization 5204
      organelle localization 591
        vesicle localization 189
          pigment granule localization 18
            melanosome localization 17
              establishment of melanosome localization + 14
              melanosome transport + 14
paths to the root