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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of cholesterol transport
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Accession:GO:0032374 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the directed movement of cholesterol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.



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regulation of cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa4 apolipoprotein A-IV involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:46,152,142...46,154,756
Ensembl chr 9:46,151,994...46,154,757
JBrowse link
G Furin furin (paired basic amino acid cleaving enzyme) acts_upstream_of_or_within IMP (MGI:4941098|PMID:21147780) MGI PMID:21147780 MGI:4941098 NCBI chr 7:80,038,942...80,055,188
Ensembl chr 7:80,038,333...80,055,184
JBrowse link
G Lrp1 low density lipoprotein receptor-related protein 1 involved_in IMP (MGI:4358638|PMID:19718435) BHF-UCL PMID:19718435 MGI:4358638 NCBI chr10:127,374,026...127,457,158
Ensembl chr10:127,374,030...127,457,017
JBrowse link
G Osbpl6 oxysterol binding protein-like 6 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:76,236,848...76,430,991
Ensembl chr 2:76,236,852...76,430,991
JBrowse link
G Sec24a Sec24 related gene family, member A (S. cerevisiae) acts_upstream_of_or_within IMP (MGI:5496780|PMID:23580231) MGI PMID:23580231 MGI:5496780 NCBI chr11:51,583,090...51,649,172
Ensembl chr11:51,583,091...51,654,461
JBrowse link
negative regulation of cholesterol efflux term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP-binding cassette, sub-family A (ABC1), member 2 acts_upstream_of ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:25,318,611...25,338,556
Ensembl chr 2:25,318,715...25,338,552
JBrowse link
G Apoe apolipoprotein E involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113
JBrowse link
G Egf epidermal growth factor involved_in IDA (MGI:4460848|PMID:20037141) BHF-UCL PMID:20037141 MGI:4460848 NCBI chr 3:129,471,223...129,548,971
Ensembl chr 3:129,471,214...129,548,965
JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 involved_in IMP (MGI:4411947|PMID:19752193) UniProt PMID:19752193 MGI:4411947 NCBI chr  X:73,057,520...73,067,527
Ensembl chr  X:73,057,520...73,067,524
JBrowse link
G Mir128-1 microRNA 128-1 involved_in
acts_upstream_of
ISO (PMID:26501192)
(PMID:23990020)
BHF-UCL PMID:23990020 PMID:26501192 NCBI chr 1:128,130,098...128,130,167
Ensembl chr 1:128,130,098...128,130,167
JBrowse link
G Mir128-2 microRNA 128-2 acts_upstream_of
involved_in
ISO (PMID:23990020)
(PMID:26501192)
BHF-UCL PMID:23990020 PMID:26501192 NCBI chr 9:111,947,704...111,947,779
Ensembl chr 9:111,947,704...111,947,779
JBrowse link
G Mir130b microRNA 130b involved_in ISO (PMID:26501192) BHF-UCL PMID:26501192 NCBI chr16:16,941,925...16,942,006
Ensembl chr16:16,941,925...16,942,006
JBrowse link
G Mir144 microRNA 144 involved_in ISO (PMID:24733347)
(PMID:23519695)
ARUK-UCL
BHF-UCL
PMID:23519695 PMID:24733347 NCBI chr11:77,963,831...77,963,896
Ensembl chr11:77,963,831...77,963,896
JBrowse link
G Mir148a microRNA 148a involved_in ISO (PMID:26437365), (PMID:26501192) BHF-UCL PMID:26437365 PMID:26501192 NCBI chr 6:51,246,792...51,246,890
Ensembl chr 6:51,246,792...51,246,890
JBrowse link
G Mir19b-1 microRNA 19b-1 involved_in ISO (PMID:25765596)
(PMID:25084135)
BHF-UCL PMID:25084135 PMID:25765596 NCBI chr14:115,281,737...115,281,823
Ensembl chr14:115,281,737...115,281,823
JBrowse link
G Mir19b-2 microRNA 19b-2 involved_in ISO (PMID:25765596)
(PMID:25084135)
BHF-UCL PMID:25084135 PMID:25765596 NCBI chr  X:51,830,860...51,830,943
Ensembl chr  X:51,830,860...51,830,943
JBrowse link
G Mir206 microRNA 206 acts_upstream_of ISO (PMID:24603323) BHF-UCL PMID:24603323 NCBI chr 1:20,749,234...20,749,306
Ensembl chr 1:20,749,234...20,749,306
JBrowse link
G Mir27a microRNA 27a involved_in ISO (PMID:24608080) ARUK-UCL PMID:24608080 NCBI chr 8:84,935,301...84,935,387
Ensembl chr 8:84,935,301...84,935,387
JBrowse link
G Mir27b microRNA 27b involved_in ISO (PMID:24608080), (PMID:26520906) ARUK-UCL PMID:24608080 PMID:26520906 NCBI chr13:63,448,526...63,448,598
Ensembl chr13:63,448,526...63,448,598
JBrowse link
G Mir301b microRNA 301b involved_in ISO (PMID:26501192) BHF-UCL PMID:26501192 NCBI chr16:16,942,264...16,942,360
Ensembl chr16:16,942,264...16,942,360
JBrowse link
G Mir302a microRNA 302a involved_in ISO (PMID:25524771) BHF-UCL PMID:25524771 NCBI chr 3:127,339,145...127,339,213
Ensembl chr 3:127,339,145...127,339,213
JBrowse link
G Mir33 microRNA 33 involved_in
acts_upstream_of
ISO (PMID:20466885), (PMID:20566875)
(PMID:20855588)
(PMID:20466882)
BHF-UCL PMID:20466882 PMID:20466885 PMID:20566875 PMID:20855588 NCBI chr15:82,082,323...82,082,391
Ensembl chr15:82,082,323...82,082,391
JBrowse link
G Mir758 microRNA 758 involved_in ISO (PMID:21885853) BHF-UCL PMID:21885853 NCBI chr12:109,679,244...109,679,324
Ensembl chr12:109,679,244...109,679,324
JBrowse link
G Mir9-1 microRNA 9-1 involved_in ISO (PMID:29584810) BHF-UCL PMID:29584810 NCBI chr 3:88,122,905...88,122,993
Ensembl chr 3:88,122,905...88,122,993
JBrowse link
G Mir9-2 microRNA 9-2 involved_in ISO (PMID:29584810) BHF-UCL PMID:29584810 NCBI chr13:83,886,933...83,887,004
Ensembl chr13:83,886,933...83,887,004
JBrowse link
G Mir9-3 microRNA 9-3 involved_in ISO (PMID:29584810) BHF-UCL PMID:29584810 NCBI chr 7:79,155,012...79,155,101
Ensembl chr 7:79,155,012...79,155,101
JBrowse link
G Pla2g10 phospholipase A2, group X involved_in IDA (MGI:5051938|PMID:20844270) BHF-UCL PMID:20844270 MGI:5051938 NCBI chr16:13,532,921...13,548,863
Ensembl chr16:13,532,921...13,548,847
JBrowse link
G Shh sonic hedgehog involved_in IMP (MGI:5306540|PMID:21931618) BHF-UCL PMID:21931618 MGI:5306540 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
G Srebf2 sterol regulatory element binding factor 2 acts_upstream_of ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:82,031,470...82,089,580
Ensembl chr15:82,031,382...82,089,580
JBrowse link
negative regulation of cholesterol import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa2 apolipoprotein A-II involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:171,049,133...171,053,948
Ensembl chr 1:171,052,623...171,053,948
JBrowse link
G Apoc3 apolipoprotein C-III involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:46,144,348...46,146,934
Ensembl chr 9:46,144,231...46,146,934
JBrowse link
negative regulation of cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa2 apolipoprotein A-II involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:171,049,133...171,053,948
Ensembl chr 1:171,052,623...171,053,948
JBrowse link
G Apoc1 apolipoprotein C-I involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 7:19,423,405...19,426,584
Ensembl chr 7:19,423,406...19,426,585
JBrowse link
G Apoc2 apolipoprotein C2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:19,405,504...19,411,866
Ensembl chr 7:19,405,504...19,411,866
JBrowse link
G Apoc2l apolipoprotein C2 like involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:19,405,504...19,415,385
Ensembl chr 7:19,405,509...19,415,348
JBrowse link
negative regulation of intestinal cholesterol absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg5 ATP binding cassette subfamily G member 5 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:84,965,602...84,990,439
Ensembl chr17:84,965,662...84,990,439
JBrowse link
G Abcg8 ATP binding cassette subfamily G member 8 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:84,983,730...85,007,761
Ensembl chr17:84,983,730...85,007,761
JBrowse link
negative regulation of intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP-binding cassette, sub-family A (ABC1), member 2 acts_upstream_of ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:25,318,611...25,338,556
Ensembl chr 2:25,318,715...25,338,552
JBrowse link
negative regulation of receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP-binding cassette, sub-family A (ABC1), member 2 acts_upstream_of ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:25,318,611...25,338,556
Ensembl chr 2:25,318,715...25,338,552
JBrowse link
G Mir17 microRNA 17 involved_in ISO (PMID:23285084) ARUK-UCL PMID:23285084 NCBI chr14:115,281,103...115,281,186
Ensembl chr14:115,281,103...115,281,186
JBrowse link
G Mir27b microRNA 27b involved_in ISO (PMID:26520906) ARUK-UCL PMID:26520906 NCBI chr13:63,448,526...63,448,598
Ensembl chr13:63,448,526...63,448,598
JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:106,299,531...106,321,522
Ensembl chr 4:106,299,526...106,321,526
JBrowse link
negative regulation of reverse cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir144 microRNA 144 involved_in ISO (PMID:24733347) ARUK-UCL PMID:24733347 NCBI chr11:77,963,831...77,963,896
Ensembl chr11:77,963,831...77,963,896
JBrowse link
positive regulation of cholesterol efflux term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP-binding cassette, sub-family A (ABC1), member 1 involved_in IMP (MGI:3047008|PMID:15210959) BHF-UCL PMID:15210959 MGI:3047008 NCBI chr 4:53,030,789...53,159,988
Ensembl chr 4:53,030,787...53,159,895
JBrowse link
G Abca12 ATP-binding cassette, sub-family A (ABC1), member 12 acts_upstream_of_or_within
involved_in
IGI
ISO
IMP
(MGI:5510615|PMID:23931754) MGI PMID:23931754 GO_REF:0000096 MGI:4834177 MGI:5510615 NCBI chr 1:71,282,249...71,454,069
Ensembl chr 1:71,281,435...71,454,069
JBrowse link
G Abca3 ATP-binding cassette, sub-family A (ABC1), member 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:24,570,997...24,629,178
Ensembl chr17:24,570,924...24,629,175
JBrowse link
G Abca7 ATP-binding cassette, sub-family A (ABC1), member 7 involved_in IDA (MGI:5553242|PMID:18429932) Alzheimers_University_of_Toronto PMID:18429932 MGI:5553242 NCBI chr10:79,832,328...79,851,406
Ensembl chr10:79,832,328...79,851,406
JBrowse link
G Abca8a ATP-binding cassette, sub-family A (ABC1), member 8a involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:109,916,460...109,988,400
Ensembl chr11:109,916,460...109,986,804
JBrowse link
G Abca8b ATP-binding cassette, sub-family A (ABC1), member 8b involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:109,823,032...109,887,100
Ensembl chr11:109,823,016...109,886,671
JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 involved_in IDA (MGI:3047008|PMID:15210959) BHF-UCL PMID:15210959 MGI:3047008 NCBI chr17:31,276,668...31,336,958
Ensembl chr17:31,276,649...31,336,962
JBrowse link
G Abcg4 ATP binding cassette subfamily G member 4 involved_in IDA (MGI:3047008|PMID:15210959) BHF-UCL PMID:15210959 MGI:3047008 NCBI chr 9:44,184,485...44,199,953
Ensembl chr 9:44,184,485...44,199,912
JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:22,965,286...22,976,718
Ensembl chr16:22,965,286...22,976,778
JBrowse link
G Apoa1 apolipoprotein A-I involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:46,139,928...46,141,767
Ensembl chr 9:46,139,878...46,141,764
JBrowse link
G Apoe apolipoprotein E involved_in ISO
IMP
(MGI:6448697|PMID:31902528) MGI
ARUK-UCL
PMID:31902528 GO_REF:0000096 MGI:4834177 MGI:6448697 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113
JBrowse link
G Cav1 caveolin 1, caveolae protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:17,306,287...17,341,327
Ensembl chr 6:17,306,334...17,341,451
JBrowse link
G Ces1a carboxylesterase 1A involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:93,746,842...93,774,820
Ensembl chr 8:93,746,842...93,774,820
JBrowse link
G Ces1b carboxylesterase 1B involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:93,783,353...93,806,645
Ensembl chr 8:93,783,356...93,806,645
JBrowse link
G Ces1c carboxylesterase 1C involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:93,825,643...93,857,911
Ensembl chr 8:93,825,643...93,857,911
JBrowse link
G Ces1d carboxylesterase 1D involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:93,892,700...93,924,432
Ensembl chr 8:93,892,696...93,924,466
JBrowse link
G Ces1e carboxylesterase 1E involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:93,927,846...93,956,259
Ensembl chr 8:93,927,846...93,956,247
JBrowse link
G Ces1f carboxylesterase 1F involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:93,982,864...94,006,394
Ensembl chr 8:93,982,864...94,006,375
JBrowse link
G Ces1g carboxylesterase 1G involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:94,028,997...94,063,837
Ensembl chr 8:94,028,997...94,063,936
JBrowse link
G Ces1h carboxylesterase 1H involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:94,078,468...94,106,405
Ensembl chr 8:94,078,471...94,106,353
JBrowse link
G Eepd1 endonuclease/exonuclease/phosphatase family domain containing 1 involved_in IMP
ISO
(MGI:6162611|PMID:28082258) BHF-UCL
MGI
PMID:28082258 GO_REF:0000096 MGI:4834177 MGI:6162611 NCBI chr 9:25,392,809...25,515,406
Ensembl chr 9:25,392,843...25,515,406
JBrowse link
G Gps2 G protein pathway suppressor 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:69,804,805...69,807,882
Ensembl chr11:69,804,714...69,807,417
JBrowse link
G Lrp1 low density lipoprotein receptor-related protein 1 involved_in IMP (MGI:4358638|PMID:19718435) BHF-UCL PMID:19718435 MGI:4358638 NCBI chr10:127,374,026...127,457,158
Ensembl chr10:127,374,030...127,457,017
JBrowse link
G Mir206 microRNA 206 acts_upstream_of ISO (PMID:24603323) BHF-UCL PMID:24603323 NCBI chr 1:20,749,234...20,749,306
Ensembl chr 1:20,749,234...20,749,306
JBrowse link
G Nfkbia nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:55,536,194...55,539,432
Ensembl chr12:55,536,195...55,539,432
JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 involved_in
acts_upstream_of_or_within
IDA
IGI
ISO
(MGI:3720271|PMID:17657314), (MGI:3794353|PMID:16825483)
(MGI:5510615|PMID:23931754)
BHF-UCL
MGI
PMID:16825483 PMID:17657314 PMID:23931754 GO_REF:0000096 MGI:3720271 MGI:3794353 MGI:4834177 MGI:5510615 NCBI chr 7:44,199,040...44,204,928
Ensembl chr 7:44,199,040...44,203,375
JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 involved_in ISO
IDA
(MGI:3794353|PMID:16825483) MGI
BHF-UCL
PMID:16825483 GO_REF:0000096 MGI:3794353 MGI:4834177 NCBI chr 2:91,014,406...91,033,189
Ensembl chr 2:91,014,406...91,033,179
JBrowse link
G Pltp phospholipid transfer protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:164,681,438...164,699,628
Ensembl chr 2:164,681,438...164,699,631
JBrowse link
G Pon1 paraoxonase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:5,168,090...5,193,987
Ensembl chr 6:5,168,090...5,193,946
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma acts_upstream_of
involved_in
ISO (PMID:16530456) MGI
AgBase
PMID:16530456 GO_REF:0000096 MGI:4834177 NCBI chr 6:115,337,840...115,467,365
Ensembl chr 6:115,337,912...115,467,360
JBrowse link
G Ptch1 patched 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:63,656,142...63,721,274
Ensembl chr13:63,656,142...63,721,412
JBrowse link
G Sirt1 sirtuin 1 involved_in IMP (MGI:3790014|PMID:17936707) UniProt PMID:17936707 MGI:3790014 NCBI chr10:63,154,784...63,174,814
Ensembl chr10:63,154,784...63,217,483
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IMP (MGI:6448697|PMID:31902528) ARUK-UCL PMID:31902528 MGI:6448697 NCBI chr17:48,653,429...48,659,304
Ensembl chr17:48,653,429...48,661,175
JBrowse link
G Zdhhc8 zinc finger, DHHC domain containing 8 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:18,038,612...18,056,471
Ensembl chr16:18,038,617...18,053,000
JBrowse link
positive regulation of cholesterol import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Commd1 COMM domain containing 1 acts_upstream_of_or_within IMP (MGI:5806548|PMID:26965651) MGI PMID:26965651 MGI:5806548 NCBI chr11:22,849,728...22,934,539
Ensembl chr11:22,846,136...22,932,382
JBrowse link
G Lrp1 low density lipoprotein receptor-related protein 1 involved_in ISO RGD
MGI
PMID:22454363 GO_REF:0000096 MGI:4417868 RGD:13800524 NCBI chr10:127,374,026...127,457,158
Ensembl chr10:127,374,030...127,457,017
JBrowse link
G Scp2 sterol carrier protein 2, liver involved_in ISO RGD
MGI
PMID:16772292 GO_REF:0000096 MGI:4417868 RGD:9850270 NCBI chr 4:107,901,027...108,002,168
Ensembl chr 4:107,901,036...108,002,195
JBrowse link
G Washc1 WASH complex subunit 1 acts_upstream_of_or_within IMP (MGI:5806548|PMID:26965651) MGI PMID:26965651 MGI:5806548 NCBI chr17:66,418,524...66,427,498
Ensembl chr17:66,418,540...66,427,498
JBrowse link
positive regulation of cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca13 ATP-binding cassette, sub-family A (ABC1), member 13 involved_in ISO
IDA
(MGI:6694370|PMID:33478937) MGI
UniProt
PMID:33478937 GO_REF:0000096 MGI:4834177 MGI:6694370 NCBI chr11:9,141,942...9,634,871
Ensembl chr11:9,141,942...9,634,259
JBrowse link
G Abcb4 ATP-binding cassette, sub-family B (MDR/TAP), member 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:8,943,614...9,009,226
Ensembl chr 5:8,943,717...9,009,231
JBrowse link
G Lipg lipase, endothelial involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr18:75,072,393...75,095,380
Ensembl chr18:75,072,393...75,094,334
JBrowse link
G Lrp1 low density lipoprotein receptor-related protein 1 involved_in IDA (MGI:4358638|PMID:19718435) ComplexPortal PMID:19718435 MGI:4358638 NCBI chr10:127,374,026...127,457,158
Ensembl chr10:127,374,030...127,457,017
JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:44,199,040...44,204,928
Ensembl chr 7:44,199,040...44,203,375
JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:91,014,406...91,033,189
Ensembl chr 2:91,014,406...91,033,179
JBrowse link
positive regulation of intestinal cholesterol absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat2 acetyl-Coenzyme A acetyltransferase 2 involved_in IDA (MGI:5302163|PMID:22045928) CACAO PMID:22045928 MGI:5302163 NCBI chr17:13,161,929...13,179,612
Ensembl chr17:13,161,777...13,179,634
JBrowse link
G Cyp8b1 cytochrome P450, family 8, subfamily b, polypeptide 1 involved_in IDA (MGI:3588413|PMID:12393855) UniProt PMID:12393855 MGI:3588413 NCBI chr 9:121,743,422...121,745,371
Ensembl chr 9:121,743,422...121,745,371
JBrowse link
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in IMP (MGI:5574251|PMID:24650549) UniProt PMID:24650549 MGI:5574251 NCBI chr11:118,879,007...118,884,047
Ensembl chr11:118,879,014...118,884,047
JBrowse link
G Lpcat3 lysophosphatidylcholine acyltransferase 3 involved_in IMP (MGI:5780634|PMID:26833026) UniProt PMID:26833026 MGI:5780634 NCBI chr 6:124,639,762...124,681,679
Ensembl chr 6:124,639,990...124,681,381
JBrowse link
positive regulation of intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (PMID:16530456) AgBase PMID:16530456 NCBI chr 6:115,337,840...115,467,365
Ensembl chr 6:115,337,912...115,467,360
JBrowse link
G Scp2 sterol carrier protein 2, liver involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 4:107,901,027...108,002,168
Ensembl chr 4:107,901,036...108,002,195
JBrowse link
G Scp2d1 SCP2 sterol-binding domain containing 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 2:144,665,586...144,666,335
Ensembl chr 2:144,665,576...144,666,335
JBrowse link
positive regulation of receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in IMP (MGI:5446858|PMID:22848640) BHF-UCL PMID:22848640 MGI:5446858 NCBI chr 9:69,360,965...69,399,074
Ensembl chr 9:69,360,902...69,399,077
JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:134,468,865...134,495,342
Ensembl chr 4:134,468,865...134,495,335
JBrowse link
positive regulation of reverse cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca5 ATP-binding cassette, sub-family A (ABC1), member 5 involved_in IMP (MGI:6508518|PMID:32687853) UniProt PMID:32687853 MGI:6508518 NCBI chr11:110,160,195...110,228,542
Ensembl chr11:110,160,195...110,228,542
JBrowse link
regulation of cholesterol efflux term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca5 ATP-binding cassette, sub-family A (ABC1), member 5 involved_in ISO
IMP
(MGI:6508518|PMID:32687853) MGI
UniProt
PMID:32687853 GO_REF:0000096 MGI:4834177 MGI:6508518 NCBI chr11:110,160,195...110,228,542
Ensembl chr11:110,160,195...110,228,542
JBrowse link
G Abca8a ATP-binding cassette, sub-family A (ABC1), member 8a involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:109,916,460...109,988,400
Ensembl chr11:109,916,460...109,986,804
JBrowse link
G Abca8b ATP-binding cassette, sub-family A (ABC1), member 8b involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:109,823,032...109,887,100
Ensembl chr11:109,823,016...109,886,671
JBrowse link
G Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:101,555,044...101,561,110
Ensembl chr 7:101,555,111...101,575,882
JBrowse link
G Naxe NAD(P)HX epimerase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:87,963,827...87,965,851
Ensembl chr 3:87,963,827...87,965,802
JBrowse link
G Ttc39b tetratricopeptide repeat domain 39B involved_in IMP
IBA
(MGI:5800596|PMID:27383786)
(MGI:6201960|PMID:21873635)
UniProt
GO_Central
PMID:21873635 PMID:27383786 MGI:5800596 MGI:6201960 NCBI chr 4:83,138,537...83,242,488
Ensembl chr 4:83,138,537...83,242,492
JBrowse link
G Ttc39d tetratricopeptide repeat domain 39D involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr17:80,523,343...80,525,365
Ensembl chr17:80,514,889...80,525,365
JBrowse link
regulation of cholesterol import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:101,555,044...101,561,110
Ensembl chr 7:101,555,111...101,575,882
JBrowse link
regulation of intestinal cholesterol absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A-I involved_in
acts_upstream_of_or_within
IBA
IDA
(MGI:6201960|PMID:21873635)
(MGI:1339009|PMID:10073953)
GO_Central
MGI
PMID:10073953 PMID:21873635 MGI:1339009 MGI:6201960 NCBI chr 9:46,139,928...46,141,767
Ensembl chr 9:46,139,878...46,141,764
JBrowse link
G Apoa2 apolipoprotein A-II acts_upstream_of_or_within IMP (MGI:84652|PMID:8962133) MGI PMID:8962133 MGI:84652 NCBI chr 1:171,049,133...171,053,948
Ensembl chr 1:171,052,623...171,053,948
JBrowse link
G Apoa4 apolipoprotein A-IV involved_in
acts_upstream_of_or_within
IBA
IMP
(MGI:6201960|PMID:21873635)
(MGI:1096980|PMID:9323588)
GO_Central
MGI
PMID:9323588 PMID:21873635 MGI:1096980 MGI:6201960 NCBI chr 9:46,152,142...46,154,756
Ensembl chr 9:46,151,994...46,154,757
JBrowse link
G Apoa5 apolipoprotein A-V involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:46,179,906...46,183,219
Ensembl chr 9:46,179,931...46,183,217
JBrowse link
G Lep leptin acts_upstream_of_or_within IDA (MGI:2386518|PMID:12114517) MGI PMID:12114517 MGI:2386518 NCBI chr 6:29,060,220...29,073,875
Ensembl chr 6:29,060,219...29,073,876
JBrowse link
regulation of intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP-binding cassette, sub-family A (ABC1), member 2 involved_in ISO
IMP
(MGI:6478054|PMID:22748276) MGI
UniProt
PMID:22748276 GO_REF:0000096 MGI:4834177 MGI:6478054 NCBI chr 2:25,318,611...25,338,556
Ensembl chr 2:25,318,715...25,338,552
JBrowse link
G Arv1 ARV1 homolog, fatty acid homeostasis modulator involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:125,448,765...125,469,533
Ensembl chr 8:125,448,878...125,460,862
JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit acts_upstream_of_or_within ISO
IMP
(MGI:4358633|PMID:19723497) MGI PMID:19723497 GO_REF:0000008 MGI:2154458 MGI:4358633 NCBI chr10:52,293,643...52,316,288
Ensembl chr10:52,293,643...52,316,279
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28732
    regulation of biological process 12957
      regulation of localization 2509
        regulation of transport 2137
          regulation of lipid transport 194
            regulation of sterol transport 91
              regulation of cholesterol transport 91
                negative regulation of cholesterol transport + 33
                positive regulation of cholesterol transport + 48
                regulation of cholesterol efflux + 61
                regulation of cholesterol import + 7
                regulation of intestinal cholesterol absorption + 11
                regulation of intracellular cholesterol transport + 11
                regulation of reverse cholesterol transport + 2
Path 2
Term Annotations click to browse term
  biological_process 28732
    localization 5612
      establishment of localization 4947
        transport 4779
          organic substance transport 2613
            lipid transport 476
              sterol transport 142
                cholesterol transport 137
                  regulation of cholesterol transport 91
                    negative regulation of cholesterol transport + 33
                    positive regulation of cholesterol transport + 48
                    regulation of cholesterol efflux + 61
                    regulation of cholesterol import + 7
                    regulation of intestinal cholesterol absorption + 11
                    regulation of intracellular cholesterol transport + 11
                    regulation of reverse cholesterol transport + 2
paths to the root