Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:intracellular cholesterol transport
go back to main search page
Accession:GO:0032367 term browser browse the term
Definition:The directed movement of cholesterol, cholest-5-en-3-beta-ol, within cells.



show annotations for term's descendants           Sort by:
 
intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 involved_in IMP (PMID:10431236) BHF-UCL
BHF-UCL
PMID:10431236 NCBI chr 9:104,781,006...104,928,155
Ensembl chr 9:104,781,006...104,928,155
JBrowse link
G ABCG1 ATP binding cassette subfamily G member 1 involved_in IEA
IMP
(PMID:15994327) InterPro
BHF-UCL
InterPro
BHF-UCL
PMID:15994327 GO_REF:0000002 NCBI chr21:42,199,689...42,297,244
Ensembl chr21:42,199,689...42,297,244
JBrowse link
G NPC1 NPC intracellular cholesterol transporter 1 involved_in IMP (PMID:27238017), (PMID:28784760), (PMID:9211849) UniProt
UniProt
PMID:9211849 PMID:27238017 PMID:28784760 NCBI chr18:23,506,184...23,586,506
Ensembl chr18:23,506,184...23,586,506
JBrowse link
G NPC2 NPC intracellular cholesterol transporter 2 involved_in
acts_upstream_of_or_within
IMP
IEA
IGI
IDA
IBA
(PMID:15937921), (PMID:27238017)
(PMID:19723497)
(PMID:17018531), (PMID:18823126)
(PMID:21873635)
UniProt
InterPro
MGI
UniProt
Ensembl
HGNC-UCL
GO_Central
MGI
GO_Central
InterPro
HGNC-UCL
PMID:15937921 PMID:17018531 PMID:18823126 PMID:19723497 PMID:21873635 More... GO_REF:0000002 GO_REF:0000107 NCBI chr14:74,479,935...74,493,512
Ensembl chr14:74,476,192...74,494,177
JBrowse link
G OSBP oxysterol binding protein involved_in IMP (PMID:29514919) UniProt
UniProt
PMID:29514919 NCBI chr11:59,574,398...59,615,774
Ensembl chr11:59,574,398...59,615,774
JBrowse link
G OSBPL2 oxysterol binding protein like 2 involved_in IMP (PMID:30581148) UniProt
UniProt
PMID:30581148 NCBI chr20:62,238,521...62,296,183
Ensembl chr20:62,231,922...62,296,213
JBrowse link
G RELCH RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing involved_in IDA
IBA
IEA
(PMID:29514919)
(PMID:21873635)
UniProt
GO_Central
InterPro
UniProt
InterPro
PMID:21873635 PMID:29514919 GO_REF:0000002 NCBI chr18:62,187,255...62,310,249
Ensembl chr18:62,187,255...62,310,249
JBrowse link
G SCP2 sterol carrier protein 2 involved_in IMP (PMID:7642518) UniProt
UniProt
PMID:7642518 NCBI chr 1:52,927,276...53,051,698
Ensembl chr 1:52,927,276...53,051,698
JBrowse link
G SERAC1 serine active site containing 1 involved_in IMP (PMID:22683713) UniProt
UniProt
PMID:22683713 NCBI chr 6:158,109,519...158,168,262
Ensembl chr 6:158,109,519...158,168,280
JBrowse link
G SNORD60 small nucleolar RNA, C/D box 60 acts_upstream_of_or_within ISO (MGI:5554658|PMID:24174535) MGI PMID:24174535 MGI:5554658 NCBI chr16:2,155,023...2,155,105
Ensembl chr16:2,155,023...2,155,105
JBrowse link
G STAR steroidogenic acute regulatory protein involved_in IBA
ISO
(PMID:21873635) GO_Central
GO_Central
RGD
PMID:14617579 PMID:21873635 RGD:4145640 NCBI chr 8:38,142,700...38,150,952
Ensembl chr 8:38,142,700...38,150,992
JBrowse link
G STARD4 StAR related lipid transfer domain containing 4 involved_in IDA
IEA
IBA
(PMID:18403318)
(PMID:21873635)
BHF-UCL
BHF-UCL
InterPro
GO_Central
GO_Central
InterPro
PMID:18403318 PMID:21873635 GO_REF:0000002 NCBI chr 5:111,496,033...111,512,535
Ensembl chr 5:111,496,033...111,512,590
JBrowse link
G TSPO2 translocator protein 2 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:41,041,386...41,044,337
Ensembl chr 6:41,042,467...41,044,337
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in IMP (PMID:10637304) UniProt
UniProt
PMID:10637304 NCBI chr16:69,311,350...69,326,939
Ensembl chr16:69,311,350...69,326,939
JBrowse link
cholesterol ester hydrolysis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CES1 carboxylesterase 1 involved_in TAS (PMID:11015575) BHF-UCL
BHF-UCL
PMID:11015575 NCBI chr16:55,802,851...55,833,096
Ensembl chr16:55,802,851...55,833,337
JBrowse link
endosome to lysosome transport of low-density lipoprotein particle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL8B ADP ribosylation factor like GTPase 8B involved_in IMP (PMID:21802320) UniProt
UniProt
PMID:21802320 NCBI chr 3:5,122,292...5,180,911
Ensembl chr 3:5,122,249...5,180,911
JBrowse link
G TPCN2 two pore segment channel 2 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr11:69,048,932...69,090,597
Ensembl chr11:69,048,932...69,136,316
JBrowse link
negative regulation of intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA2 ATP binding cassette subfamily A member 2 acts_upstream_of IDA (PMID:21810484) ARUK-UCL
ARUK-UCL
PMID:21810484 NCBI chr 9:137,007,234...137,028,922
Ensembl chr 9:137,007,234...137,028,915
JBrowse link
negative regulation of receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA2 ATP binding cassette subfamily A member 2 acts_upstream_of IDA (PMID:21810484) ARUK-UCL
ARUK-UCL
PMID:21810484 NCBI chr 9:137,007,234...137,028,922
Ensembl chr 9:137,007,234...137,028,915
JBrowse link
G MIR17 microRNA 17 involved_in IDA (PMID:23285084) ARUK-UCL PMID:23285084 NCBI chr13:91,350,605...91,350,688
Ensembl chr13:91,350,605...91,350,688
JBrowse link
G MIR27B microRNA 27b involved_in IDA (PMID:26520906) ARUK-UCL PMID:26520906 NCBI chr 9:95,085,445...95,085,541
Ensembl chr 9:95,085,445...95,085,541
JBrowse link
G PCSK9 proprotein convertase subtilisin/kexin type 9 involved_in IDA (PMID:22848640) BHF-UCL
BHF-UCL
PMID:22848640 NCBI chr 1:55,039,548...55,064,852
Ensembl chr 1:55,039,447...55,064,852
JBrowse link
positive regulation of intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPARG peroxisome proliferator activated receptor gamma involved_in ISO (PMID:16530456) AgBase PMID:16530456 NCBI chr 3:12,287,368...12,434,344
Ensembl chr 3:12,287,368...12,434,356
JBrowse link
G SCP2 sterol carrier protein 2 involved_in IBA
NAS
IDA
(PMID:21873635)
(PMID:1703300)
(PMID:15449949)
GO_Central
GO_Central
UniProt
UniProt
PMID:1703300 PMID:15449949 PMID:21873635 NCBI chr 1:52,927,276...53,051,698
Ensembl chr 1:52,927,276...53,051,698
JBrowse link
G SCP2D1 SCP2 sterol binding domain containing 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr20:18,813,783...18,814,378
Ensembl chr20:18,813,783...18,814,378
JBrowse link
positive regulation of receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 involved_in IDA
IEA
(PMID:22848640) BHF-UCL
BHF-UCL
Ensembl
PMID:22848640 GO_REF:0000107 NCBI chr15:60,347,151...60,397,986
Ensembl chr15:60,347,134...60,402,883
JBrowse link
G LDLRAP1 low density lipoprotein receptor adaptor protein 1 involved_in IMP (PMID:12417523), (PMID:12464675), (PMID:15166224) BHF-UCL
BHF-UCL
PMID:12417523 PMID:12464675 PMID:15166224 NCBI chr 1:25,543,606...25,590,400
Ensembl chr 1:25,543,606...25,568,886
JBrowse link
receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LDLR low density lipoprotein receptor involved_in IMP
IBA
(PMID:6299582)
(PMID:21873635)
BHF-UCL
BHF-UCL
GO_Central
GO_Central
PMID:6299582 PMID:21873635 NCBI chr19:11,089,463...11,133,820
Ensembl chr19:11,089,462...11,133,820
JBrowse link
G LDLRAP1 low density lipoprotein receptor adaptor protein 1 involved_in IMP (PMID:12417523), (PMID:12464675), (PMID:15166224) BHF-UCL
BHF-UCL
PMID:12417523 PMID:12464675 PMID:15166224 NCBI chr 1:25,543,606...25,590,400
Ensembl chr 1:25,543,606...25,568,886
JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:4413421|PMID:18948618)
(PMID:21873635)
MGI
GO_Central
GO_Central
PMID:18948618 PMID:21873635 MGI:4413421 NCBI chr12:12,116,025...12,267,044
Ensembl chr12:12,116,025...12,267,044
JBrowse link
regulation of intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA2 ATP binding cassette subfamily A member 2 involved_in IMP
ISS
(PMID:15238223) UniProt
UniProt
PMID:15238223 GO_REF:0000024 NCBI chr 9:137,007,234...137,028,922
Ensembl chr 9:137,007,234...137,028,915
JBrowse link
G ARV1 ARV1 homolog, fatty acid homeostasis modulator involved_in IMP (PMID:20663892) UniProt
UniProt
PMID:20663892 NCBI chr 1:230,979,094...231,000,733
Ensembl chr 1:230,978,981...231,000,733
JBrowse link
G NUS1 NUS1 dehydrodolichyl diphosphate synthase subunit acts_upstream_of_or_within
involved_in
IGI
IEA
(PMID:19723497) MGI
Ensembl
MGI
PMID:19723497 GO_REF:0000107 NCBI chr 6:117,675,469...117,710,727
Ensembl chr 6:117,675,469...117,710,727
JBrowse link
vesicle-mediated cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in IMP (PMID:29353240) UniProt
UniProt
PMID:29353240 NCBI chr10:22,534,854...22,714,578
Ensembl chr10:22,534,854...22,714,578
JBrowse link
G SYT7 synaptotagmin 7 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr11:61,513,714...61,588,387
Ensembl chr11:61,513,714...61,581,148
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19643
    localization 5902
      cellular localization 3793
        intracellular transport 1782
          intracellular lipid transport 49
            intracellular sterol transport 34
              intracellular cholesterol transport 31
                negative regulation of intracellular cholesterol transport + 4
                positive regulation of intracellular cholesterol transport + 5
                receptor-mediated endocytosis involved in cholesterol transport + 8
                regulation of intracellular cholesterol transport + 11
                vesicle-mediated cholesterol transport + 5
Path 2
Term Annotations click to browse term
  biological_process 19643
    localization 5902
      establishment of localization 5232
        transport 5071
          organic substance transport 2811
            lipid transport 484
              sterol transport 145
                cholesterol transport 131
                  intracellular cholesterol transport 31
                    negative regulation of intracellular cholesterol transport + 4
                    positive regulation of intracellular cholesterol transport + 5
                    receptor-mediated endocytosis involved in cholesterol transport + 8
                    regulation of intracellular cholesterol transport + 11
                    vesicle-mediated cholesterol transport + 5
paths to the root