Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:intracellular sterol transport
go back to main search page
Accession:GO:0032366 term browser browse the term
Definition:The directed movement of sterols within cells.



show annotations for term's descendants           Sort by:
 
intracellular sterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARV1 ARV1 homolog, fatty acid homeostasis modulator involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 4:8,409,039...8,424,776
Ensembl chr 4:8,409,484...8,424,644
JBrowse link
G NPC2 NPC intracellular cholesterol transporter 2 involved_in ISO (PMID:17018531) HGNC-UCL PMID:17018531 NCBI chr 8:47,641,185...47,650,543
Ensembl chr 8:47,628,077...47,650,576
JBrowse link
endosome to lysosome transport of low-density lipoprotein particle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL8B ADP ribosylation factor like GTPase 8B involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr20:12,479,680...12,525,330
Ensembl chr20:12,481,860...12,525,499
JBrowse link
G TPCN2 two pore segment channel 2 involved_in ISO (MGI:5691857|PMID:25144390) UniProt PMID:25144390 MGI:5691857 NCBI chr18:48,956,833...48,984,499
Ensembl chr18:48,957,249...48,984,564
JBrowse link
intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr11:60,761,669...60,869,753
Ensembl chr11:60,761,655...60,890,496
JBrowse link
G ABCG1 ATP binding cassette subfamily G member 1 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr31:36,574,406...36,627,598
Ensembl chr31:36,553,380...36,620,043
JBrowse link
G LOC119872409 small nucleolar RNA SNORD60 acts_upstream_of_or_within ISO (MGI:5554658|PMID:24174535) MGI PMID:24174535 MGI:5554658
G NPC1 NPC intracellular cholesterol transporter 1 involved_in ISO (PMID:27238017), (PMID:28784760), (PMID:9211849) UniProt PMID:9211849 PMID:27238017 PMID:28784760 NCBI chr 7:64,764,941...64,802,507
Ensembl chr 7:64,760,121...64,802,902
JBrowse link
G NPC2 NPC intracellular cholesterol transporter 2 involved_in
acts_upstream_of_or_within
ISS
IEA
IBA
ISO
(PMID:21873635)
(PMID:19723497)
UniProt
InterPro
UniProt
GO_Central
InterPro
MGI
GO_Central
PMID:19723497 PMID:21873635 GO_REF:0000002 GO_REF:0000024 NCBI chr 8:47,641,185...47,650,543
Ensembl chr 8:47,628,077...47,650,576
JBrowse link
G OSBP oxysterol binding protein involved_in ISO (PMID:29514919) UniProt PMID:29514919 NCBI chr18:37,159,511...37,191,720
Ensembl chr18:37,159,576...37,189,731
JBrowse link
G RELCH RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 1:14,573,377...14,683,795
Ensembl chr 1:14,579,381...14,683,555
JBrowse link
G SCP2 sterol carrier protein 2 involved_in ISO (PMID:7642518) UniProt PMID:7642518 NCBI chr 5:55,860,053...55,971,657
Ensembl chr 5:55,860,549...55,964,014
JBrowse link
G SERAC1 serine active site containing 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:47,599,802...47,651,034
Ensembl chr 1:47,578,472...47,669,494
JBrowse link
G STAR steroidogenic acute regulatory protein involved_in ISO
IBA
(PMID:21873635) RGD
GO_Central
GO_Central
PMID:14617579 PMID:21873635 RGD:4145640 NCBI chr16:27,326,355...27,331,025
Ensembl chr16:27,326,355...27,331,025
JBrowse link
G STARD4 StAR related lipid transfer domain containing 4 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
GO_Central
Ensembl
Ensembl
InterPro
PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr 3:1,154,358...1,171,248
Ensembl chr 3:1,154,358...1,170,469
JBrowse link
G TSPO2 translocator protein 2 involved_in IMP
IEA
(PMID:32358067) UniProt
Ensembl
UniProt
PMID:32358067 GO_REF:0000107 NCBI chr12:9,796,421...9,799,181
Ensembl chr12:9,795,739...9,799,178
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in ISO (PMID:10637304) UniProt PMID:10637304 NCBI chr 5:80,327,059...80,340,380 JBrowse link
negative regulation of intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA2 ATP binding cassette subfamily A member 2 acts_upstream_of ISO (PMID:21810484) ARUK-UCL PMID:21810484 NCBI chr 9:48,610,906...48,630,932
Ensembl chr 9:48,613,996...48,629,857
JBrowse link
negative regulation of receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA2 ATP binding cassette subfamily A member 2 acts_upstream_of ISO (PMID:21810484) ARUK-UCL PMID:21810484 NCBI chr 9:48,610,906...48,630,932
Ensembl chr 9:48,613,996...48,629,857
JBrowse link
G PCSK9 proprotein convertase subtilisin/kexin type 9 involved_in ISO (PMID:22848640) BHF-UCL PMID:22848640 NCBI chr 5:54,197,211...54,210,724 JBrowse link
positive regulation of intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPARG peroxisome proliferator activated receptor gamma involved_in ISO (PMID:16530456) AgBase PMID:16530456 NCBI chr20:6,134,618...6,265,481
Ensembl chr20:6,050,357...6,207,981
JBrowse link
G SCP2 sterol carrier protein 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 5:55,860,053...55,971,657
Ensembl chr 5:55,860,549...55,964,014
JBrowse link
G SCP2D1 SCP2 sterol binding domain containing 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr24:4,400,768...4,411,013
Ensembl chr24:4,400,097...4,401,447
JBrowse link
positive regulation of receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr30:25,176,845...25,210,244
Ensembl chr30:25,115,842...25,218,281
JBrowse link
G LDLRAP1 low density lipoprotein receptor adaptor protein 1 involved_in ISO (PMID:12417523), (PMID:12464675), (PMID:15166224) BHF-UCL PMID:12417523 PMID:12464675 PMID:15166224 NCBI chr 2:74,340,272...74,363,929
Ensembl chr 2:74,341,036...74,364,162
JBrowse link
receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LDLR low density lipoprotein receptor involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr20:50,115,175...50,152,443
Ensembl chr20:50,048,736...50,152,355
JBrowse link
G LDLRAP1 low density lipoprotein receptor adaptor protein 1 involved_in ISO (PMID:12417523), (PMID:12464675), (PMID:15166224) BHF-UCL PMID:12417523 PMID:12464675 PMID:15166224 NCBI chr 2:74,340,272...74,363,929
Ensembl chr 2:74,341,036...74,364,162
JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:4413421|PMID:18948618)
(PMID:21873635)
MGI
GO_Central
GO_Central
PMID:18948618 PMID:21873635 MGI:4413421 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437
JBrowse link
regulation of intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA2 ATP binding cassette subfamily A member 2 involved_in ISO (PMID:15238223)
(MGI:6478054|PMID:22748276)
UniProt PMID:15238223 PMID:22748276 MGI:6478054 NCBI chr 9:48,610,906...48,630,932
Ensembl chr 9:48,613,996...48,629,857
JBrowse link
G ARV1 ARV1 homolog, fatty acid homeostasis modulator involved_in ISO (PMID:20663892) UniProt PMID:20663892 NCBI chr 4:8,409,039...8,424,776
Ensembl chr 4:8,409,484...8,424,644
JBrowse link
G NUS1 NUS1 dehydrodolichyl diphosphate synthase subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19723497)
(MGI:4358633|PMID:19723497)
Ensembl
Ensembl
MGI
PMID:19723497 GO_REF:0000107 MGI:4358633 NCBI chr 1:57,866,760...57,895,505
Ensembl chr 1:57,866,879...57,893,077
JBrowse link
vesicle-mediated cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 2:10,464,019...10,642,365
Ensembl chr 2:10,463,010...10,640,327
JBrowse link
G SYT7 synaptotagmin 7 involved_in ISO (MGI:5645834|PMID:25860611) UniProt PMID:25860611 MGI:5645834 NCBI chr18:54,863,072...54,926,121
Ensembl chr18:54,861,754...54,921,367
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16237
    localization 6084
      cellular localization 2916
        intracellular transport 1539
          intracellular lipid transport 37
            intracellular sterol transport 27
              intracellular cholesterol transport + 27
              negative regulation of intracellular sterol transport + 2
              positive regulation of intracellular sterol transport + 5
              regulation of intracellular sterol transport + 9
Path 2
Term Annotations click to browse term
  biological_process 16237
    localization 6084
      establishment of localization 4515
        transport 4354
          organic substance transport 2349
            organic hydroxy compound transport 291
              sterol transport 115
                intracellular sterol transport 27
                  intracellular cholesterol transport + 27
                  negative regulation of intracellular sterol transport + 2
                  positive regulation of intracellular sterol transport + 5
                  regulation of intracellular sterol transport + 9
paths to the root