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ONTOLOGY REPORT - ANNOTATIONS


Term:intracellular lipid transport
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Accession:GO:0032365 term browser browse the term
Definition:The directed movement of lipids within cells.


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intracellular lipid transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fabp3 fatty acid binding protein 3 ISO (MGI:MGI:1336545|PMID:10224224), (MGI:MGI:3575839|PMID:15835924) RGD PMID:10224224, PMID:15835924 MGI:MGI:1336545, MGI:MGI:3575839 NCBI chr 5:148,528,854...148,535,597
Ensembl chr 5:148,528,725...148,535,565
JBrowse link
ER to Golgi ceramide transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cert1 ceramide transporter 1 ISO
IBA
UniProtKB:Q6VVX2 (PMID:14685229), (PMID:18184806)
MGI:MGI:3837565 (MGI:MGI:5604609|PMID:24642596)
PMID:21873635
RGD PMID:14685229, PMID:18184806, PMID:24642596, PMID:21873635 MGI:MGI:5604609, RGD:13792537 NCBI chr 2:27,365,145...27,469,797
Ensembl chr 2:27,365,148...27,469,779
JBrowse link
G Plekha8 pleckstrin homology domain containing A8 ISO
IBA
ISS
(PMID:17687330)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:17687330, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 4:84,770,294...84,820,887
Ensembl chr 4:84,770,375...84,820,887
JBrowse link
G Sgpp1 sphingosine-1-phosphate phosphatase 1 ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:16782891)
UniProt
Ensembl
RGD
PMID:16782891 GO_REF:0000024, GO_REF:0000107 NCBI chr 6:98,675,324...98,696,492
Ensembl chr 6:98,675,326...98,695,988
JBrowse link
intracellular cholesterol transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 ISO (PMID:10431236) RGD PMID:10431236 NCBI chr 5:69,857,717...69,983,042
Ensembl chr 5:69,857,771...69,983,015
JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 ISO (PMID:15994327) RGD PMID:15994327 NCBI chr20:9,743,269...9,842,735
Ensembl chr20:9,743,269...9,840,489
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 ISO (PMID:27238017), (PMID:28784760), (PMID:9211849) RGD PMID:9211849, PMID:27238017, PMID:28784760 NCBI chr18:3,616,878...3,662,656
Ensembl chr18:3,616,878...3,662,683
JBrowse link
G Npc2 NPC intracellular cholesterol transporter 2 ISO
IBA
(MGI:MGI:3763329|PMID:17018531)
PMID:21873635
UniProtKB:Q96E22 (PMID:15937921), (PMID:17018531), (PMID:18823126), (PMID:19723497), (PMID:27238017)
RGD PMID:15937921, PMID:17018531, PMID:18823126, PMID:19723497, PMID:27238017, PMID:21873635 MGI:MGI:3763329, RGD:13792537 NCBI chr 6:108,467,410...108,488,330
Ensembl chr 6:108,467,410...108,488,330
JBrowse link
G Osbp oxysterol binding protein ISO (PMID:29514919) RGD PMID:29514919 NCBI chr 1:228,395,237...228,425,366
Ensembl chr 1:228,395,558...228,425,361
JBrowse link
G Osbpl2 oxysterol binding protein-like 2 ISO (PMID:30581148) RGD PMID:30581148 NCBI chr 3:175,493,650...175,538,965
Ensembl chr 3:175,493,698...175,538,963
JBrowse link
G Rab11a RAB11a, member RAS oncogene family ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 8:70,192,975...70,215,719
Ensembl chr 8:70,192,975...70,215,719
JBrowse link
G Relch RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing ISO (PMID:29514919) RGD PMID:29514919 NCBI chr13:25,656,983...25,752,792
Ensembl chr13:25,656,983...25,752,792
JBrowse link
G Serac1 serine active site containing 1 ISO (PMID:22683713) RGD PMID:22683713 NCBI chr 1:46,934,499...46,978,264
Ensembl chr 1:46,942,192...46,978,261
JBrowse link
G Star steroidogenic acute regulatory protein IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:14617579, PMID:21873635 RGD:4145640, RGD:13792537 NCBI chr16:71,036,204...71,040,847
Ensembl chr16:71,036,204...71,040,847
JBrowse link
G Stard4 StAR-related lipid transfer domain containing 4 ISO
IBA
(PMID:18403318)
PMID:21873635
RGD PMID:18403318, PMID:21873635 RGD:13792537 NCBI chr18:25,982,210...25,997,555
Ensembl chr18:25,984,638...25,997,555
JBrowse link
G Tspo2 translocator protein 2 ISO
IEA
(PMID:32358067)
(MGI:MGI:6450299|PMID:32358067)
GO_REF:0000107
RGD
Ensembl
PMID:32358067 GO_REF:0000107, MGI:MGI:6450299 NCBI chr 9:14,510,378...14,514,609
Ensembl chr 9:14,513,037...14,514,416
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A ISO (PMID:10637304) RGD PMID:10637304 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496
JBrowse link
intracellular sterol transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arv1 ARV1 homolog, fatty acid homeostasis modulator IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:57,484,720...57,496,539
Ensembl chr19:57,484,634...57,496,695
JBrowse link
G Npc2 NPC intracellular cholesterol transporter 2 ISO (PMID:17018531) RGD PMID:17018531 NCBI chr 6:108,467,410...108,488,330
Ensembl chr 6:108,467,410...108,488,330
JBrowse link
long-chain fatty acid import into peroxisome term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 ISO
IBA
ISS
UniProtKB:P34230 (PMID:18757502)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:18757502, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr  X:157,073,860...157,095,652
Ensembl chr  X:157,072,736...157,095,274
JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:132,294,564...132,343,169
Ensembl chr 7:132,294,562...132,343,169
JBrowse link
G Abcd3 ATP binding cassette subfamily D member 3 TAS
IBA
PMID:21873635 RGD
GO_Central
PMID:11883951, PMID:21873635 RGD:1358265, RGD:13792537 NCBI chr 2:225,335,708...225,389,120
Ensembl chr 2:225,335,718...225,389,120
JBrowse link
G Abcd4 ATP binding cassette subfamily D member 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:108,315,026...108,329,550
Ensembl chr 6:108,315,035...108,329,464
JBrowse link
negative regulation of intracellular cholesterol transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 ISO (PMID:21810484) RGD PMID:21810484 NCBI chr 3:2,648,787...2,668,770
Ensembl chr 3:2,648,885...2,668,809
JBrowse link
negative regulation of receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 ISO
IEA
(PMID:21810484)
GO_REF:0000107
RGD
Ensembl
PMID:21810484 GO_REF:0000107 NCBI chr 3:2,648,787...2,668,770
Ensembl chr 3:2,648,885...2,668,809
JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 ISO (PMID:22848640) RGD PMID:22848640 NCBI chr 5:126,031,368...126,053,726
Ensembl chr 5:126,031,368...126,053,726
JBrowse link
positive regulation of intracellular cholesterol transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scp2 sterol carrier protein 2 ISO
IBA
(PMID:15449949)
PMID:21873635
RGD PMID:15449949, PMID:21873635 RGD:13792537 NCBI chr 5:127,647,934...127,735,703
Ensembl chr 5:127,620,274...127,735,739
JBrowse link
G Scp2d1 SCP2 sterol-binding domain containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:138,973,171...138,975,624
Ensembl chr 3:138,974,871...138,975,621
JBrowse link
positive regulation of receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 ISO (MGI:MGI:5446858|PMID:22848640)
(PMID:22848640)
RGD PMID:22848640 MGI:MGI:5446858 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594
JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 ISO (PMID:12417523), (PMID:12464675), (PMID:15166224) RGD PMID:12417523, PMID:12464675, PMID:15166224 NCBI chr 5:152,964,294...152,987,286
Ensembl chr 5:152,966,591...152,987,211
JBrowse link
receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ldlr low density lipoprotein receptor IEA
ISO
GO_REF:0000107
(PMID:6299582)
Ensembl
RGD
PMID:6299582 GO_REF:0000107 NCBI chr 8:22,750,425...22,773,305
Ensembl chr 8:22,750,336...22,774,903
JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 ISO (PMID:12417523), (PMID:12464675), (PMID:15166224) RGD PMID:12417523, PMID:12464675, PMID:15166224 NCBI chr 5:152,964,294...152,987,286
Ensembl chr 5:152,966,591...152,987,211
JBrowse link
G Lrp6 LDL receptor related protein 6 ISO
IBA
MGI:MGI:4123883 (MGI:MGI:4413421|PMID:18948618)
PMID:21873635
RGD PMID:18948618, PMID:21873635 MGI:MGI:4413421, RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
regulation of intracellular cholesterol transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 ISO
ISS
(PMID:15238223)
GO_REF:0000024
RGD
UniProt
PMID:15238223 GO_REF:0000024 NCBI chr 3:2,648,787...2,668,770
Ensembl chr 3:2,648,885...2,668,809
JBrowse link
G Arv1 ARV1 homolog, fatty acid homeostasis modulator ISO (PMID:20663892) RGD PMID:20663892 NCBI chr19:57,484,720...57,496,539
Ensembl chr19:57,484,634...57,496,695
JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit ISO (MGI:MGI:4358633|PMID:19723497)
UniProtKB:P61916 (PMID:19723497)
RGD PMID:19723497 MGI:MGI:4358633 NCBI chr20:33,557,052...33,584,011
Ensembl chr20:33,557,052...33,584,010
JBrowse link
vesicle-mediated cholesterol transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt7 synaptotagmin 7 ISO
ISS
(MGI:MGI:5645834|PMID:25860611)
GO_REF:0000024
RGD
UniProt
PMID:25860611 GO_REF:0000024, MGI:MGI:5645834 NCBI chr 1:226,435,816...226,498,008
Ensembl chr 1:226,435,979...226,493,377
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    cellular process 18788
      cellular localization 2937
        intracellular transport 1511
          intracellular lipid transport 32
            ER to Golgi ceramide transport 3
            ER to chloroplast lipid transport 0
            carnitine shuttle 0
            intracellular sterol transport + 24
            long-chain fatty acid import into peroxisome 4
            negative regulation of intracellular lipid transport + 2
            positive regulation of intracellular lipid transport + 4
            regulation of intracellular lipid transport + 8
Path 2
Term Annotations click to browse term
  biological_process 20014
    localization 6486
      establishment of localization 4918
        transport 4774
          organic substance transport 2612
            lipid transport 401
              intracellular lipid transport 32
                ER to Golgi ceramide transport 3
                ER to chloroplast lipid transport 0
                carnitine shuttle 0
                intracellular sterol transport + 24
                long-chain fatty acid import into peroxisome 4
                negative regulation of intracellular lipid transport + 2
                positive regulation of intracellular lipid transport + 4
                regulation of intracellular lipid transport + 8
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.