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ONTOLOGY REPORT - ANNOTATIONS


Term:oxidized purine DNA binding
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Accession:GO:0032357 term browser browse the term
Definition:Binding to a DNA region containing an oxidized purine residue.
Synonyms:exact_synonym: oxidised purine DNA binding;   oxidized purine base DNA binding;   oxidized purine nucleobase DNA binding



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oxidized purine DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Msh2 mutS homolog 2 contributes_to
enables
ISO
IEA
(PMID:11756455), (PMID:11801590)
GO_REF:0000107
RGD
Ensembl
PMID:11756455 PMID:11801590 GO_REF:0000107 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
JBrowse link
G Msh3 mutS homolog 3 NOT|contributes_to ISO (PMID:11756455) RGD PMID:11756455 NCBI chr 2:23,444,326...23,585,777 JBrowse link
G Msh6 mutS homolog 6 contributes_to ISO (PMID:11756455), (PMID:11801590) RGD PMID:11756455 PMID:11801590 NCBI chr 6:6,562,631...6,579,995
Ensembl chr 6:6,562,632...6,579,956
JBrowse link
G Mutyh mutY DNA glycosylase enables IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 5:130,274,034...130,286,149
Ensembl chr 5:130,274,122...130,286,146
JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase enables ISO (PMID:14706345) RGD PMID:14706345 NCBI chr 4:146,474,701...146,481,959
Ensembl chr 4:146,474,750...146,484,766
JBrowse link
G Recql4 RecQ like helicase 4 enables ISO (PMID:22039056) RGD PMID:22039056 NCBI chr 7:108,423,453...108,430,790
Ensembl chr 7:108,423,455...108,430,619
JBrowse link
G Rps3 ribosomal protein S3 enables ISO (PMID:14706345) RGD PMID:14706345 NCBI chr 1:153,778,363...153,783,663
Ensembl chr 1:153,777,472...153,783,680
JBrowse link
8-hydroxy-2'-deoxyguanosine DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase enables ISO (PMID:19734539) RGD PMID:19734539 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312
JBrowse link
G Pot1 protection of telomeres 1 enables ISO (PMID:19734539) RGD PMID:19734539 NCBI chr 4:54,205,330...54,263,137
Ensembl chr 4:54,205,332...54,263,042
JBrowse link
G Wrn WRN RecQ like helicase enables ISO (PMID:19734539) RGD PMID:19734539 NCBI chr16:58,763,517...58,898,604
Ensembl chr16:58,763,504...58,895,450
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 20893
    binding 17956
      organic cyclic compound binding 6324
        nucleic acid binding 4050
          DNA binding 2357
            damaged DNA binding 71
              oxidized DNA binding 11
                oxidized purine DNA binding 10
                  8-hydroxy-2'-deoxyguanosine DNA binding 3
paths to the root