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ONTOLOGY REPORT - ANNOTATIONS


Term:oxidized DNA binding
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Accession:GO:0032356 term browser browse the term
Definition:Binding to a DNA region containing an oxidized residue.
Synonyms:exact_synonym: oxidised DNA binding



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oxidized DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G XRCC1 X-ray repair cross complementing 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:111,548,719...111,571,816
Ensembl chr 1:111,548,719...111,571,816
JBrowse link
8-hydroxy-2'-deoxyguanosine DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLM BLM RecQ like helicase enables IEA Ensembl GO_REF:0000107 NCBI chr 3:53,408,120...53,506,728
Ensembl chr 3:53,408,217...53,473,146
JBrowse link
G POT1 protection of telomeres 1 enables IEA Ensembl GO_REF:0000107 NCBI chr14:10,987,385...11,067,473
Ensembl chr14:10,987,494...11,066,956
JBrowse link
G WRN WRN RecQ like helicase enables IEA Ensembl GO_REF:0000107 NCBI chr16:33,164,662...33,304,466
Ensembl chr16:33,167,364...33,304,625
JBrowse link
oxidized purine DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MSH2 mutS homolog 2 enables
contributes_to
IEA
ISO
(PMID:11756455), (PMID:11801590) Ensembl
HGNC-UCL
PMID:11756455 PMID:11801590 GO_REF:0000107 NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210
JBrowse link
G MSH3 mutS homolog 3 NOT|contributes_to ISO (PMID:11756455) HGNC PMID:11756455 NCBI chr 3:26,335,788...26,520,633
Ensembl chr 3:26,336,403...26,518,521
JBrowse link
G MSH6 mutS homolog 6 enables
contributes_to
IEA
ISO
(PMID:11756455), (PMID:11801590) Ensembl
HGNC-UCL
PMID:11756455 PMID:11801590 GO_REF:0000107 NCBI chr10:49,825,330...49,838,036
Ensembl chr10:49,803,898...49,838,028
JBrowse link
G MUTYH mutY DNA glycosylase enables IEA TreeGrafter GO_REF:0000118 NCBI chr15:15,018,345...15,026,539
Ensembl chr15:14,906,543...15,026,539
JBrowse link
G OGG1 8-oxoguanine DNA glycosylase enables IEA Ensembl GO_REF:0000107 NCBI chr20:8,486,150...8,491,448
Ensembl chr20:8,480,005...8,491,264
JBrowse link
G RECQL4 RecQ like helicase 4 enables IEA Ensembl GO_REF:0000107 NCBI chr13:37,930,906...37,936,653
Ensembl chr13:37,930,621...37,936,753
JBrowse link
G RPS3 ribosomal protein S3 enables ISO (PMID:14706345) UniProt PMID:14706345 NCBI chr21:23,180,515...23,187,034
Ensembl chr21:23,180,515...23,187,034
JBrowse link
G TESK2 testis associated actin remodelling kinase 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr15:14,871,104...15,014,896
Ensembl chr15:14,906,543...15,026,539
JBrowse link
oxidized pyrimidine DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RPS3 ribosomal protein S3 enables ISO (PMID:19656744) UniProt PMID:19656744 NCBI chr21:23,180,515...23,187,034
Ensembl chr21:23,180,515...23,187,034
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 18817
    binding 16691
      organic cyclic compound binding 5927
        nucleic acid binding 3794
          DNA binding 2302
            damaged DNA binding 72
              oxidized DNA binding 12
                oxidized purine DNA binding + 11
                oxidized pyrimidine DNA binding 1
paths to the root