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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of chondrocyte differentiation
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Accession:GO:0032330 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of chondrocyte differentiation.



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regulation of chondrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccn2 cellular communication network factor 2 acts_upstream_of_or_within IMP (MGI:4413658|PMID:18597638) MGI PMID:18597638 MGI:4413658 NCBI chr10:24,595,442...24,598,683
Ensembl chr10:24,595,442...24,598,683
JBrowse link
G Glg1 golgi apparatus protein 1 acts_upstream_of_or_within IMP (MGI:4829577|PMID:20530870) MGI PMID:20530870 MGI:4829577 NCBI chr 8:111,153,284...111,259,210
Ensembl chr 8:111,154,421...111,259,216
JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within IGI (MGI:5462316|PMID:22916278) MGI PMID:22916278 MGI:5462316 NCBI chr 6:52,242,105...52,245,810
Ensembl chr 6:52,242,106...52,245,810
JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within IGI (MGI:5462316|PMID:22916278) MGI PMID:22916278 MGI:5462316 NCBI chr 2:74,679,558...74,687,016
Ensembl chr 2:74,679,557...74,687,016
JBrowse link
G Lnpk lunapark, ER junction formation factor acts_upstream_of_or_within IMP (MGI:5462316|PMID:22916278) MGI PMID:22916278 MGI:5462316 NCBI chr 2:74,514,836...74,579,458
Ensembl chr 2:74,520,291...74,579,435
JBrowse link
G Maf avian musculoaponeurotic fibrosarcoma oncogene homolog acts_upstream_of_or_within IMP (MGI:2676505|PMID:14512017) MGI PMID:14512017 MGI:2676505 NCBI chr 8:115,703,253...115,706,894
Ensembl chr 8:115,682,942...115,707,794
JBrowse link
G Mboat2 membrane bound O-acyltransferase domain containing 2 involved_in IMP (MGI:6467698|PMID:29196633) UniProt PMID:29196633 MGI:6467698 NCBI chr12:24,831,435...24,964,400
Ensembl chr12:24,830,879...24,964,397
JBrowse link
G Mdk midkine involved_in IMP (MGI:5693192|PMID:25551381) UniProt PMID:25551381 MGI:5693192 NCBI chr 2:91,929,805...91,932,297
Ensembl chr 2:91,929,805...91,932,297
JBrowse link
G Prkg2 protein kinase, cGMP-dependent, type II involved_in ISO RGD
MGI
PMID:15466490 GO_REF:0000096 MGI:4417868 RGD:150429792 NCBI chr 5:98,929,773...99,037,375
Ensembl chr 5:98,929,773...99,037,351
JBrowse link
G Pthlh parathyroid hormone-like peptide involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 6:147,252,109...147,264,013
Ensembl chr 6:147,252,101...147,264,183
JBrowse link
G Shox2 short stature homeobox 2 acts_upstream_of_or_within IMP (MGI:3621617|PMID:16537395) MGI PMID:16537395 MGI:3621617 NCBI chr 3:66,971,723...66,981,771
Ensembl chr 3:66,971,727...66,981,771
JBrowse link
G Six2 sine oculis-related homeobox 2 involved_in IMP (MGI:4822095|PMID:20515681) UniProt PMID:20515681 MGI:4822095 NCBI chr17:85,662,736...85,688,254
Ensembl chr17:85,684,277...85,688,274
JBrowse link
G Trps1 transcriptional repressor GATA binding 1 involved_in IMP (MGI:3848565|PMID:19389374) UniProt PMID:19389374 MGI:3848565 NCBI chr15:50,654,757...50,890,631
Ensembl chr15:50,654,752...50,890,463
JBrowse link
negative regulation of chondrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pthlh parathyroid hormone-like peptide acts_upstream_of_or_within ISO (MGI:85084|PMID:9008714) MGI PMID:9008714 MGI:85084 NCBI chr 6:147,252,109...147,264,013
Ensembl chr 6:147,252,101...147,264,183
JBrowse link
G Rflna refilin A acts_upstream_of_or_within
involved_in
IGI
IBA
(MGI:5570967|PMID:24436304)
(MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:21873635 PMID:24436304 MGI:5570967 MGI:6201960 NCBI chr 5:125,003,448...125,012,547
Ensembl chr 5:125,003,221...125,012,547
JBrowse link
G Rflnb refilin B involved_in
acts_upstream_of_or_within
IBA
IGI
(MGI:6201960|PMID:21873635)
(MGI:5570967|PMID:24436304)
GO_Central
MGI
PMID:21873635 PMID:24436304 MGI:5570967 MGI:6201960 NCBI chr11:76,019,194...76,027,782
Ensembl chr11:76,019,194...76,027,782
JBrowse link
negative regulation of chondrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts12 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:11,064,773...11,349,232
Ensembl chr15:11,064,790...11,349,231
JBrowse link
G Adamts7 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:90,162,904...90,200,102
Ensembl chr 9:90,163,069...90,208,071
JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IDA (MGI:3714677|PMID:17481601) MGI PMID:17481601 MGI:3714677 NCBI chr14:46,383,525...46,390,669
Ensembl chr14:46,383,520...46,390,669
JBrowse link
G Ccn4 cellular communication network factor 4 involved_in IMP (MGI:6294593|PMID:15331410) UniProt PMID:15331410 MGI:6294593 NCBI chr15:66,891,369...66,923,201
Ensembl chr15:66,891,320...66,923,201
JBrowse link
G Chadl chondroadherin-like involved_in IMP (MGI:5617405|PMID:25451920) UniProt PMID:25451920 MGI:5617405 NCBI chr15:81,686,166...81,697,373
Ensembl chr15:81,678,296...81,697,287
JBrowse link
G Ctnnb1 catenin (cadherin associated protein), beta 1 acts_upstream_of_or_within IGI (MGI:3701031|PMID:16818445) MGI PMID:16818445 MGI:3701031 NCBI chr 9:120,933,400...120,960,507
Ensembl chr 9:120,929,216...120,960,507
JBrowse link
G Efemp1 epidermal growth factor-containing fibulin-like extracellular matrix protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:28,853,154...28,926,743
Ensembl chr11:28,853,204...28,926,743
JBrowse link
G Gdf5 growth differentiation factor 5 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:155,941,023...155,945,367
Ensembl chr 2:155,941,023...155,945,367
JBrowse link
G Gli2 GLI-Kruppel family member GLI2 acts_upstream_of_or_within IMP (MGI:3709778|PMID:17328886) MGI PMID:17328886 MGI:3709778 NCBI chr 1:118,834,061...119,054,405
Ensembl chr 1:118,834,132...119,053,619
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:113,748,675...113,758,648
Ensembl chr 2:113,746,164...113,758,646
JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 acts_upstream_of_or_within IMP (MGI:2178869|PMID:11790802) MGI PMID:11790802 MGI:2178869 NCBI chr19:5,740,900...5,758,536
Ensembl chr19:5,740,904...5,758,532
JBrowse link
G Mkx mohawk homeobox involved_in ISO RGD
MGI
PMID:27370800 GO_REF:0000096 MGI:4417868 RGD:40924660 NCBI chr18:6,934,966...7,004,779
Ensembl chr18:6,934,518...7,004,780
JBrowse link
G Nkx3-2 NK3 homeobox 2 involved_in IMP (MGI:3617032|PMID:16421188) UniProt PMID:16421188 MGI:3617032 NCBI chr 5:41,761,483...41,764,220
Ensembl chr 5:41,761,483...41,764,501
JBrowse link
G Pth parathyroid hormone involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 7:113,385,576...113,388,672
Ensembl chr 7:113,385,580...113,388,570
JBrowse link
G Pthlh parathyroid hormone-like peptide acts_upstream_of_or_within IGI
IMP
ISO
IDA
(MGI:3709778|PMID:17328886)
(MGI:1352921|PMID:8895385)
(MGI:85084|PMID:9008714)
MGI PMID:8895385 PMID:9008714 PMID:17328886 MGI:1352921 MGI:3709778 MGI:85084 NCBI chr 6:147,252,109...147,264,013
Ensembl chr 6:147,252,101...147,264,183
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 involved_in IMP (MGI:6414736|PMID:29644115) UniProt PMID:29644115 MGI:6414736 NCBI chr 5:121,130,533...121,191,397
Ensembl chr 5:121,130,533...121,191,397
JBrowse link
G Rarb retinoic acid receptor, beta acts_upstream_of_or_within IMP (MGI:1353721|PMID:10684250) MGI PMID:10684250 MGI:1353721 NCBI chr14:16,430,839...17,082,331
Ensembl chr14:16,430,839...16,819,156
JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within IMP (MGI:1353721|PMID:10684250) MGI PMID:10684250 MGI:1353721 NCBI chr15:102,234,938...102,257,522
Ensembl chr15:102,234,938...102,257,517
JBrowse link
G Snai2 snail family zinc finger 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:14,705,852...14,709,395
Ensembl chr16:14,705,852...14,709,385
JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IMP (MGI:2135696|PMID:11371614) MGI PMID:11371614 MGI:2135696 NCBI chr11:112,782,210...112,787,757
Ensembl chr11:112,782,224...112,787,760
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor I involved_in IMP (MGI:3848261|PMID:19494318) BHF-UCL PMID:19494318 MGI:3848261 NCBI chr 4:47,353,222...47,414,926
Ensembl chr 4:47,353,222...47,414,931
JBrowse link
G Wnt9a wingless-type MMTV integration site family, member 9A acts_upstream_of_or_within IMP
IGI
(MGI:3701031|PMID:16818445) MGI PMID:16818445 MGI:3701031 NCBI chr11:59,306,849...59,333,552
Ensembl chr11:59,306,928...59,333,552
JBrowse link
positive regulation of chondrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp6 bone morphogenetic protein 6 involved_in ISO RGD
MGI
PMID:23077084 GO_REF:0000096 MGI:4417868 RGD:7242190 NCBI chr13:38,345,716...38,500,314
Ensembl chr13:38,345,107...38,500,302
JBrowse link
G Fgf18 fibroblast growth factor 18 acts_upstream_of_or_within IGI (MGI:3584218|PMID:15781473) MGI PMID:15781473 MGI:3584218 NCBI chr11:33,116,970...33,147,400
Ensembl chr11:33,117,430...33,147,400
JBrowse link
G Gdf5 growth differentiation factor 5 acts_upstream_of_or_within
involved_in
IDA
IGI
ISO
(MGI:1329266|PMID:9885252)
(MGI:3819026|PMID:18363966)
MGI PMID:9885252 PMID:18363966 GO_REF:0000096 MGI:1329266 MGI:3819026 MGI:4834177 NCBI chr 2:155,941,023...155,945,367
Ensembl chr 2:155,941,023...155,945,367
JBrowse link
G Gdf6 growth differentiation factor 6 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:9,844,372...9,862,345
Ensembl chr 4:9,844,372...9,862,345
JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (MGI:3709778|PMID:17328886) MGI PMID:17328886 MGI:3709778 NCBI chr13:15,463,723...15,730,026
Ensembl chr13:15,463,235...15,730,026
JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within IGI (MGI:3043491|PMID:14668414) MGI PMID:14668414 MGI:3043491 NCBI chr 6:52,242,105...52,245,810
Ensembl chr 6:52,242,106...52,245,810
JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within IGI (MGI:3043491|PMID:14668414) MGI PMID:14668414 MGI:3043491 NCBI chr 2:74,679,558...74,687,016
Ensembl chr 2:74,679,557...74,687,016
JBrowse link
G Loxl2 lysyl oxidase-like 2 involved_in IMP (MGI:5320274|PMID:21071451) UniProt PMID:21071451 MGI:5320274 NCBI chr14:69,608,692...69,695,834
Ensembl chr14:69,609,068...69,695,834
JBrowse link
G Mustn1 musculoskeletal, embryonic nuclear protein 1 acts_upstream_of_or_within IMP
IDA
(MGI:5703727|PMID:19410023) MGI PMID:19410023 MGI:5703727 NCBI chr14:30,879,257...30,881,610
Ensembl chr14:30,879,200...30,881,610
JBrowse link
G Pkdcc protein kinase domain containing, cytoplasmic involved_in IMP (MGI:3813934|PMID:19097194), (MGI:4438146|PMID:19465597) UniProt PMID:19097194 PMID:19465597 MGI:3813934 MGI:4438146 NCBI chr17:83,215,283...83,225,069
Ensembl chr17:83,215,292...83,225,070
JBrowse link
G Por cytochrome p450 oxidoreductase involved_in ISO RGD
MGI
PMID:19264869 GO_REF:0000096 MGI:4417868 RGD:2316785 NCBI chr 5:135,670,040...135,735,326
Ensembl chr 5:135,670,033...135,735,326
JBrowse link
G Rela v-rel reticuloendotheliosis viral oncogene homolog A (avian) involved_in ISO RGD
MGI
PMID:17884819 GO_REF:0000096 MGI:4417868 RGD:2298851 NCBI chr19:5,637,442...5,648,134
Ensembl chr19:5,637,483...5,648,130
JBrowse link
G Runx2 runt related transcription factor 2 acts_upstream_of_or_within IMP (MGI:1332911|PMID:10072783) MGI PMID:10072783 MGI:1332911 NCBI chr17:44,495,987...44,814,797
Ensembl chr17:44,495,987...44,814,797
JBrowse link
G Smad3 SMAD family member 3 involved_in IMP (MGI:5285145|PMID:21035443) UniProt PMID:21035443 MGI:5285145 NCBI chr 9:63,646,766...63,757,994
Ensembl chr 9:63,646,767...63,757,994
JBrowse link
G Sox5 SRY (sex determining region Y)-box 5 involved_in ISO
IDA
IBA
(MGI:5285147|PMID:20940257)
(MGI:6201960|PMID:21873635)
MGI
UniProt
GO_Central
PMID:20940257 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:5285147 MGI:6201960 NCBI chr 6:143,828,425...144,782,287
Ensembl chr 6:143,828,425...144,781,977
JBrowse link
G Sox6 SRY (sex determining region Y)-box 6 involved_in IBA
ISO
IDA
(MGI:6201960|PMID:21873635)
(MGI:5285147|PMID:20940257)
GO_Central
MGI
UniProt
PMID:20940257 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:5285147 MGI:6201960 NCBI chr 7:115,470,872...116,040,776
Ensembl chr 7:115,470,872...116,038,796
JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 involved_in IMP
ISO
IDA
IBA
(MGI:4950303|PMID:21367821)
(MGI:5285147|PMID:20940257)
(MGI:6201960|PMID:21873635)
UniProt
MGI
GO_Central
PMID:20940257 PMID:21367821 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:4950303 MGI:5285147 MGI:6201960 NCBI chr11:112,782,210...112,787,757
Ensembl chr11:112,782,224...112,787,760
JBrowse link
G Thrb thyroid hormone receptor beta involved_in ISO RGD
MGI
PMID:15647824 GO_REF:0000096 MGI:4417868 RGD:1601663 NCBI chr14:17,659,225...18,040,097
Ensembl chr14:17,660,261...18,038,090
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:48,651,797...48,836,225
Ensembl chr 9:48,654,297...48,836,222
JBrowse link
G Zfp219 zinc finger protein 219 involved_in IMP (MGI:5285147|PMID:20940257) UniProt PMID:20940257 MGI:5285147 NCBI chr14:52,006,075...52,021,140
Ensembl chr14:52,006,077...52,020,733
JBrowse link
positive regulation of chondrocyte hypertrophy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smad7 SMAD family member 7 involved_in IDA (MGI:6377914|PMID:29503843) CACAO PMID:29503843 MGI:6377914 NCBI chr18:75,367,365...75,395,935
Ensembl chr18:75,367,529...75,395,935
JBrowse link
regulation of chondrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin2 axin 2 acts_upstream_of_or_within IMP (MGI:4818263|PMID:19623616) MGI PMID:19623616 MGI:4818263 NCBI chr11:108,917,828...108,950,783
Ensembl chr11:108,920,349...108,950,783
JBrowse link
G Rflna refilin A involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 5:125,003,448...125,012,547
Ensembl chr 5:125,003,221...125,012,547
JBrowse link
G Rflnb refilin B involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr11:76,019,194...76,027,782
Ensembl chr11:76,019,194...76,027,782
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28627
    developmental process 7102
      regulation of developmental process 2749
        regulation of cell differentiation 1746
          regulation of chondrocyte differentiation 54
            negative regulation of chondrocyte differentiation + 24
            positive regulation of chondrocyte differentiation + 21
            regulation of chondrocyte development + 5
            regulation of chondrocyte differentiation involved in endochondral bone morphogenesis + 0
Path 2
Term Annotations click to browse term
  biological_process 28627
    developmental process 7102
      anatomical structure development 6486
        multicellular organism development 5853
          system development 5484
            animal organ development 4223
              cartilage development 227
                regulation of cartilage development 72
                  regulation of chondrocyte differentiation 54
                    negative regulation of chondrocyte differentiation + 24
                    positive regulation of chondrocyte differentiation + 21
                    regulation of chondrocyte development + 5
                    regulation of chondrocyte differentiation involved in endochondral bone morphogenesis + 0
paths to the root