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ONTOLOGY REPORT - ANNOTATIONS


Term:serine transport
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Accession:GO:0032329 term browser browse the term
Definition:The directed movement of L-serine, 2-amino-3-hydroxypropanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
Synonyms:narrow_synonym: serine import
 alt_id: GO:0090478



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serine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc38a5 solute carrier family 38, member 5 involved_in IBA
ISO
PMID:21873635
(PMID:11243884)
RGD PMID:11243884 PMID:21873635 RGD:13792537 NCBI chr  X:14,213,727...14,222,498
Ensembl chr  X:14,213,729...14,222,498
JBrowse link
D-serine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfkbie NFKB inhibitor epsilon IMP RGD PMID:16277611 RGD:2302399 NCBI chr 9:15,443,600...15,450,437
Ensembl chr 9:15,436,941...15,450,437
JBrowse link
G Sfxn1 sideroflexin 1 involved_in ISO (PMID:30442778) RGD PMID:30442778 NCBI chr17:10,486,250...10,522,640
Ensembl chr17:10,486,271...10,522,529
JBrowse link
G Slc7a10 solute carrier family 7 member 10 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:3716074 (MGI:3715682|PMID:17432963)
PMID:21873635
Ensembl
RGD
PMID:17432963 PMID:21873635 GO_REF:0000107 MGI:3715682, RGD:13792537 NCBI chr 1:87,829,084...87,845,073
Ensembl chr 1:87,829,175...87,845,071
JBrowse link
L-serine import across plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc1a4 solute carrier family 1 member 4 involved_in ISO (PMID:26041762) RGD PMID:26041762 NCBI chr14:94,530,801...94,560,190
Ensembl chr14:94,529,084...94,560,418
JBrowse link
L-serine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfxn1 sideroflexin 1 involved_in ISO
ISS
(PMID:30442778)
GO_REF:0000024
RGD
UniProt
PMID:30442778 GO_REF:0000024 NCBI chr17:10,486,250...10,522,640
Ensembl chr17:10,486,271...10,522,529
JBrowse link
G Slc1a4 solute carrier family 1 member 4 involved_in IMP
IBA
ISO
IDA
PMID:21873635
(PMID:8101838), (PMID:8340364), (PMID:8910405)
primary neurons and astrocytes
RGD PMID:8101838 PMID:8340364 PMID:8910405 PMID:15099708 PMID:21873635 More... RGD:1302759, RGD:13792537, RGD:1642943 NCBI chr14:94,530,801...94,560,190
Ensembl chr14:94,529,084...94,560,418
JBrowse link
G Slc1a5 solute carrier family 1 member 5 IDA astrocytes RGD PMID:12885409 RGD:1642943 NCBI chr 1:77,456,849...77,470,952
Ensembl chr 1:77,456,694...77,470,952
JBrowse link
G Slc38a2 solute carrier family 38, member 2 involved_in IDA PMID:15218073 ARUK-UCL PMID:15218073 RGD:15090853 NCBI chr 7:127,851,267...127,863,482
Ensembl chr 7:127,851,267...127,863,436
JBrowse link
G Slc38a5 solute carrier family 38, member 5 involved_in IDA PMID:15218073 ARUK-UCL PMID:15218073 RGD:15090853 NCBI chr  X:14,213,727...14,222,498
Ensembl chr  X:14,213,729...14,222,498
JBrowse link
G Slc38a7 solute carrier family 38, member 7 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:9,209,203...9,225,472
Ensembl chr19:9,209,257...9,225,454
JBrowse link
serine import across plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc1a4 solute carrier family 1 member 4 acts_upstream_of_or_within ISO (MGI:6478859|PMID:11030592) RGD PMID:11030592 MGI:6478859 NCBI chr14:94,530,801...94,560,190
Ensembl chr14:94,529,084...94,560,418
JBrowse link
serine import into mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfxn1 sideroflexin 1 involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:30442778)
UniProt
RGD
PMID:30442778 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr17:10,486,250...10,522,640
Ensembl chr17:10,486,271...10,522,529
JBrowse link
G Sfxn3 sideroflexin 3 involved_in ISO
ISS
IBA
(PMID:30442778)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:30442778 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:243,907,958...243,917,065
Ensembl chr 1:243,907,751...243,917,073
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18737
    localization 5475
      establishment of localization 4825
        transport 4663
          ion transport 1667
            cation transport 1277
              serine transport 9
                D-serine transport 3
                L-serine transport + 6
                serine import across plasma membrane + 1
                serine import into mitochondrion 2
Path 2
Term Annotations click to browse term
  biological_process 18737
    localization 5475
      establishment of localization 4825
        transport 4663
          ion transport 1667
            anion transport 533
              organic anion transport 388
                carboxylic acid transport 315
                  serine transport 9
                    D-serine transport 3
                    L-serine transport + 6
                    serine import across plasma membrane + 1
                    serine import into mitochondrion 2
paths to the root