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ONTOLOGY REPORT - ANNOTATIONS

Term:serine transport
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Accession:GO:0032329 term browser browse the term
Definition:The directed movement of L-serine, 2-amino-3-hydroxypropanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
Synonyms:narrow_synonym: serine import
 alt_id: GO:0090478


show annotations for term's descendants           Sort by:
serine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc38a5 solute carrier family 38, member 5 involved_in IBA
ISO		 PMID:21873635
(PMID:11243884)		 RGD PMID:11243884 PMID:21873635 RGD:13792537 NCBI chr  X:14,213,727...14,222,498
Ensembl chr  X:14,213,729...14,222,498 		JBrowse link
D-serine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfkbie NFKB inhibitor epsilon IMP RGD PMID:16277611 RGD:2302399 NCBI chr 9:15,443,600...15,450,437
Ensembl chr 9:15,436,941...15,450,437 		JBrowse link
G Slc7a10 solute carrier family 7 member 10 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
(MGI:6515183|PMID:33707431)
MGI:3716074 (MGI:3715682|PMID:17432963)
PMID:21873635		 Ensembl
RGD		 PMID:17432963 PMID:33707431 PMID:21873635 GO_REF:0000107 MGI:3715682 MGI:6515183, RGD:13792537 NCBI chr 1:87,829,084...87,845,073
Ensembl chr 1:87,829,175...87,845,071 		JBrowse link
L-serine import across plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc1a4 solute carrier family 1 member 4 involved_in ISO (PMID:26041762) RGD PMID:26041762 NCBI chr14:94,530,801...94,560,190
Ensembl chr14:94,529,084...94,560,418 		JBrowse link
G Slc38a2 solute carrier family 38, member 2 involved_in IDA PMID:16629640 UniProt PMID:16629640 RGD:152995548 NCBI chr 7:127,851,267...127,863,482
Ensembl chr 7:127,851,267...127,863,436 		JBrowse link
G Slc38a5 solute carrier family 38, member 5 involved_in IDA PMID:16629640 UniProt PMID:16629640 RGD:152995548 NCBI chr  X:14,213,727...14,222,498
Ensembl chr  X:14,213,729...14,222,498 		JBrowse link
L-serine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfxn1 sideroflexin 1 involved_in ISO
IEA
ISS		 (PMID:30442778)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:30442778 GO_REF:0000024 GO_REF:0000107 NCBI chr17:10,486,250...10,522,640
Ensembl chr17:10,486,271...10,522,529 		JBrowse link
G Slc1a4 solute carrier family 1 member 4 involved_in IMP
IBA
ISO
IDA		 PMID:21873635
(PMID:8101838), (PMID:8340364), (PMID:8910405)
primary neurons and astrocytes		 RGD PMID:8101838 PMID:8340364 PMID:8910405 PMID:15099708 PMID:21873635 More... RGD:1302759, RGD:13792537, RGD:1642943 NCBI chr14:94,530,801...94,560,190
Ensembl chr14:94,529,084...94,560,418 		JBrowse link
G Slc1a5 solute carrier family 1 member 5 IDA astrocytes RGD PMID:12885409 RGD:1642943 NCBI chr 1:77,456,849...77,470,952
Ensembl chr 1:77,456,694...77,470,952 		JBrowse link
G Slc38a2 solute carrier family 38, member 2 involved_in IDA PMID:15218073 ARUK-UCL PMID:15218073 RGD:15090853 NCBI chr 7:127,851,267...127,863,482
Ensembl chr 7:127,851,267...127,863,436 		JBrowse link
G Slc38a5 solute carrier family 38, member 5 involved_in IDA PMID:15218073 ARUK-UCL PMID:15218073 RGD:15090853 NCBI chr  X:14,213,727...14,222,498
Ensembl chr  X:14,213,729...14,222,498 		JBrowse link
serine import across plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc1a4 solute carrier family 1 member 4 acts_upstream_of_or_within ISO (MGI:6478859|PMID:11030592) RGD PMID:11030592 MGI:6478859 NCBI chr14:94,530,801...94,560,190
Ensembl chr14:94,529,084...94,560,418 		JBrowse link
serine import into mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfxn1 sideroflexin 1 involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000107
PMID:21873635
(PMID:30442778)		 UniProt
Ensembl
RGD		 PMID:30442778 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr17:10,486,250...10,522,640
Ensembl chr17:10,486,271...10,522,529 		JBrowse link
G Sfxn3 sideroflexin 3 involved_in ISO
IEA
ISS
IBA		 (PMID:30442778)
GO_REF:0000107
GO_REF:0000024
PMID:21873635		 RGD
Ensembl
UniProt		 PMID:30442778 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 1:243,907,958...243,917,065
Ensembl chr 1:243,907,751...243,917,073 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19553
    localization 5546
      establishment of localization 4870
        transport 4545
          nitrogen compound transport 1958
            amino acid transport 181
              neutral amino acid transport 62
                serine transport 8
                  D-serine transport 2
                  L-serine transport + 5
                  serine import across plasma membrane + 3
                  serine import into mitochondrion 2
Path 2
Term Annotations click to browse term
  biological_process 19553
    localization 5546
      establishment of localization 4870
        transport 4545
          organic substance transport 2737
            organic anion transport 485
              carboxylic acid transport 395
                amino acid transport 181
                  neutral amino acid transport 62
                    serine transport 8
                      D-serine transport 2
                      L-serine transport + 5
                      serine import across plasma membrane + 3
                      serine import into mitochondrion 2
paths to the root