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ONTOLOGY REPORT - ANNOTATIONS


Term:serine transport
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Accession:GO:0032329 term browser browse the term
Definition:The directed movement of L-serine, 2-amino-3-hydroxypropanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
Synonyms:narrow_synonym: serine import
 alt_id: GO:0090478


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serine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc38a5 solute carrier family 38, member 5 involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:11243884)
Ensembl
RGD
PMID:11243884, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr  X:14,963,919...14,972,675
Ensembl chr  X:14,963,921...14,972,675
JBrowse link
D-serine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfkbie NFKB inhibitor epsilon IMP RGD PMID:16277611 RGD:2302399 NCBI chr 9:17,828,405...17,835,240
Ensembl chr 9:17,828,408...17,835,240
JBrowse link
G Sfxn1 sideroflexin 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:30442778)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:30442778 GO_REF:0000024 GO_REF:0000107 NCBI chr17:11,046,588...11,082,219
Ensembl chr17:11,045,761...11,082,047
JBrowse link
G Slc7a10 solute carrier family 7 member 10 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:3716074 (MGI:3715682|PMID:17432963)
PMID:21873635
Ensembl
RGD
PMID:17432963, PMID:21873635 GO_REF:0000107 MGI:3715682, RGD:13792537 NCBI chr 1:91,432,952...91,448,566
Ensembl chr 1:91,433,030...91,448,564
JBrowse link
L-serine import across plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc1a4 solute carrier family 1 member 4 involved_in ISO (PMID:26041762) RGD PMID:26041762 NCBI chr14:104,582,884...104,612,417
Ensembl chr14:104,581,190...104,612,597
JBrowse link
L-serine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfxn1 sideroflexin 1 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:30442778)
Ensembl
UniProt
RGD
PMID:30442778 GO_REF:0000024 GO_REF:0000107 NCBI chr17:11,046,588...11,082,219
Ensembl chr17:11,045,761...11,082,047
JBrowse link
G Slc1a4 solute carrier family 1 member 4 involved_in IMP
ISO
IDA
(PMID:8101838), (PMID:8340364), (PMID:8910405)
primary neurons and astrocytes
RGD PMID:8101838 PMID:8340364 PMID:8910405, PMID:15099708, PMID:12885409 RGD:1302759, RGD:1642943 NCBI chr14:104,582,884...104,612,417
Ensembl chr14:104,581,190...104,612,597
JBrowse link
G Slc1a5 solute carrier family 1 member 5 IDA astrocytes RGD PMID:12885409 RGD:1642943 NCBI chr 1:78,710,686...78,724,789
Ensembl chr 1:78,710,539...78,724,794
JBrowse link
G Slc38a2 solute carrier family 38, member 2 involved_in IDA PMID:15218073 ARUK-UCL PMID:15218073 RGD:15090853 NCBI chr 7:138,088,654...138,100,869
Ensembl chr 7:138,088,649...138,100,841
JBrowse link
G Slc38a5 solute carrier family 38, member 5 involved_in IDA PMID:15218073 ARUK-UCL PMID:15218073 RGD:15090853 NCBI chr  X:14,963,919...14,972,675
Ensembl chr  X:14,963,921...14,972,675
JBrowse link
G Slc38a7 solute carrier family 38, member 7 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:9,622,594...9,638,221
Ensembl chr19:9,622,611...9,638,222
JBrowse link
serine import across plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc1a4 solute carrier family 1 member 4 acts_upstream_of_or_within ISO (MGI:6478859|PMID:11030592) RGD PMID:11030592 MGI:6478859 NCBI chr14:104,582,884...104,612,417
Ensembl chr14:104,581,190...104,612,597
JBrowse link
serine import into mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfxn1 sideroflexin 1 involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
PMID:21873635
GO_REF:0000107
(PMID:30442778)
UniProt
Ensembl
RGD
PMID:30442778, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr17:11,046,588...11,082,219
Ensembl chr17:11,045,761...11,082,047
JBrowse link
G Sfxn2 sideroflexin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:266,333,440...266,345,736
Ensembl chr 1:266,333,440...266,345,697
JBrowse link
G Sfxn3 sideroflexin 3 involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:30442778)
UniProt
RGD
PMID:30442778, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:264,796,671...264,805,159
Ensembl chr 1:264,796,812...264,805,157
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19633
    localization 6435
      establishment of localization 4860
        transport 4697
          ion transport 1651
            cation transport 1266
              serine transport 10
                D-serine transport 3
                L-serine transport + 6
                serine import across plasma membrane + 1
                serine import into mitochondrion 3
Path 2
Term Annotations click to browse term
  biological_process 19633
    localization 6435
      establishment of localization 4860
        transport 4697
          ion transport 1651
            anion transport 547
              organic anion transport 385
                carboxylic acid transport 311
                  serine transport 10
                    D-serine transport 3
                    L-serine transport + 6
                    serine import across plasma membrane + 1
                    serine import into mitochondrion 3
paths to the root