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ONTOLOGY REPORT - ANNOTATIONS

Term:dense core granule localization
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Accession:GO:0032253 term browser browse the term
Definition:Any process in which a dense core granule is transported to, and/or maintained in, a specific location within the cell.
Synonyms:exact_synonym: dense core granule localisation;   dense core vesicle localization
 related_synonym: dense core granule clustering


show annotations for term's descendants           Sort by:
anterograde neuronal dense core vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:101,010,447...101,094,891
Ensembl chr 9:93,563,045...93,647,480 		JBrowse link
G Kif1b kinesin family member 1B involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 5:164,890,778...165,025,848
Ensembl chr 5:159,561,271...159,742,778 		JBrowse link
G Kif1c kinesin family member 1C involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr10:55,913,010...55,942,220
Ensembl chr10:55,415,900...55,443,545 		JBrowse link
G Sybu syntabulin IMP RGD PMID:17611281 RGD:13217407 NCBI chr 7:77,731,662...77,833,413
Ensembl chr 7:75,847,003...75,948,828 		JBrowse link
dense core granule cytoskeletal transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A involved_in IMP PMID:30021165
PMID:29166604		 UniProt PMID:30021165 PMID:29166604 RGD:14995321, RGD:15023486 NCBI chr 9:101,010,447...101,094,891
Ensembl chr 9:93,563,045...93,647,480 		JBrowse link
G Ppfia2 PTPRF interacting protein alpha 2 involved_in ISO
IEA		 (PMID:30021165)
GO_REF:0000107		 RGD
Ensembl		 PMID:30021165 GO_REF:0000107 NCBI chr 7:43,652,258...44,126,555
Ensembl chr 7:41,765,575...42,239,599 		JBrowse link
G Syt4 synaptotagmin 4 involved_in IMP
IEA
ISO		 PMID:29166604
GO_REF:0000107
(PMID:29166604)		 Ensembl
RGD		 PMID:29166604 PMID:29166604 GO_REF:0000107, RGD:15023486 NCBI chr18:23,311,454...23,320,863
Ensembl chr18:23,038,378...23,046,332 		JBrowse link
G Tanc2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 involved_in IMP PMID:30021165 UniProt PMID:30021165 RGD:14995321 NCBI chr10:91,052,860...91,373,291
Ensembl chr10:90,553,002...90,868,756 		JBrowse link
dense core granule docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Unc13a unc-13 homolog A NOT|involved_in ISO UniProtKB:Q9Z1N9 (PMID:26575293) RGD PMID:26575293 NCBI chr16:18,367,891...18,415,808
Ensembl chr16:18,336,229...18,381,872 		JBrowse link
G Unc13b unc-13 homolog B NOT|involved_in ISO UniProtKB:Q4KUS2 (PMID:26575293) RGD PMID:26575293 NCBI chr 5:62,084,809...62,299,884
Ensembl chr 5:57,289,227...57,502,926 		JBrowse link
dense core granule exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadps calcium dependent secretion activator involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:14,719,078...15,173,218
Ensembl chr15:12,290,262...12,742,779 		JBrowse link
G Cadps2 calcium dependent secretion activator 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:52,746,054...53,275,252
Ensembl chr 4:51,781,053...52,309,829 		JBrowse link
dense core granule priming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Unc13a unc-13 homolog A involved_in IGI
IBA		 PMID:26575293
GO_REF:0000033		 GO_Central PMID:26575293 GO_REF:0000033, RGD:12050107 NCBI chr16:18,367,891...18,415,808
Ensembl chr16:18,336,229...18,381,872 		JBrowse link
G Unc13b unc-13 homolog B involved_in IGI
IBA		 PMID:26575293
GO_REF:0000033		 GO_Central PMID:26575293 GO_REF:0000033, RGD:12050107 NCBI chr 5:62,084,809...62,299,884
Ensembl chr 5:57,289,227...57,502,926 		JBrowse link
G Unc13c unc-13 homolog C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:83,127,650...83,553,822
Ensembl chr 8:74,247,899...74,673,223 		JBrowse link
G Unc13d unc-13 homolog D involved_in IGI PMID:26575293 SynGO-UCL PMID:26575293 RGD:12050107 NCBI chr10:101,795,652...101,810,409
Ensembl chr10:101,296,776...101,311,687 		JBrowse link
negative regulation of dense core granule exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt4 synaptotagmin 4 involved_in IMP PMID:20303854 ParkinsonsUK-UCL PMID:20303854 RGD:11541109 NCBI chr18:23,311,454...23,320,863
Ensembl chr18:23,038,378...23,046,332 		JBrowse link
neuronal dense core vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Unc13a unc-13 homolog A involved_in ISS
ISO		 GO_REF:0000024
(PMID:23229896)		 UniProt
RGD		 PMID:23229896 GO_REF:0000024 NCBI chr16:18,367,891...18,415,808
Ensembl chr16:18,336,229...18,381,872 		JBrowse link
G Unc13b unc-13 homolog B involved_in ISS
ISO		 GO_REF:0000024
(PMID:23229896)		 UniProt
RGD		 PMID:23229896 GO_REF:0000024 NCBI chr 5:62,084,809...62,299,884
Ensembl chr 5:57,289,227...57,502,926 		JBrowse link
positive regulation of anterograde dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map2 microtubule-associated protein 2 involved_in IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:75,173,038...75,431,606
Ensembl chr 9:67,723,371...67,979,809 		JBrowse link
G Mecp2 methyl CpG binding protein 2 IMP RGD PMID:22127389 RGD:12790715 NCBI chr  X:156,932,481...156,995,981
Ensembl chr  X:151,789,930...151,844,689 		JBrowse link
G Trim46 tripartite motif-containing 46 involved_in IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 2:176,939,253...176,952,285
Ensembl chr 2:174,641,496...174,654,141 		JBrowse link
positive regulation of dense core granule exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt4 synaptotagmin 4 involved_in ISO
IEA		 (PMID:18468511)
GO_REF:0000107		 RGD
Ensembl		 PMID:18468511 GO_REF:0000107 NCBI chr18:23,311,454...23,320,863
Ensembl chr18:23,038,378...23,046,332 		JBrowse link
positive regulation of retrograde dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mecp2 methyl CpG binding protein 2 IMP RGD PMID:22127389 RGD:12790715 NCBI chr  X:156,932,481...156,995,981
Ensembl chr  X:151,789,930...151,844,689 		JBrowse link
postsynaptic dense core vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt6 synaptotagmin 6 involved_in IDA
IMP		 PMID:26216953 SynGO PMID:26216953 PMID:26216953 RGD:13702162, RGD:13702162 NCBI chr 2:193,781,051...193,840,741
Ensembl chr 2:191,093,007...191,149,956 		JBrowse link
presynaptic dense core vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadps calcium dependent secretion activator involved_in IEA
ISO		 GO_REF:0000107
(PMID:25719439)		 Ensembl
RGD		 PMID:25719439 GO_REF:0000107 NCBI chr15:14,719,078...15,173,218
Ensembl chr15:12,290,262...12,742,779 		JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 involved_in ISO (PMID:31679900) RGD PMID:31679900 NCBI chr 9:32,193,352...32,692,998
Ensembl chr 9:24,698,854...25,196,631 		JBrowse link
G Snap25 synaptosome associated protein 25 involved_in ISO (PMID:28404788) RGD PMID:28404788 NCBI chr 3:144,494,579...144,576,449
Ensembl chr 3:124,041,898...124,123,760 		JBrowse link
G Stxbp1 syntaxin binding protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:36,474,428...36,536,120
Ensembl chr 3:16,076,391...16,138,369 		JBrowse link
G Stxbp2 syntaxin binding protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:6,487,265...6,498,351
Ensembl chr12:1,689,410...1,700,458 		JBrowse link
G Stxbp3 syntaxin binding protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:199,130,725...199,173,823
Ensembl chr 2:196,442,634...196,485,671 		JBrowse link
G Syt10 synaptotagmin 10 involved_in ISO (PMID:28683263) RGD PMID:28683263 NCBI chr 7:122,737,301...122,800,462
Ensembl chr 7:120,862,972...120,920,863 		JBrowse link
regulation of dense core granule exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baiap3 BAI1-associated protein 3 involved_in ISO
IBA		 (PMID:28626000)
GO_REF:0000033		 RGD
GO_Central		 PMID:28626000 GO_REF:0000033 NCBI chr10:14,764,768...14,777,516
Ensembl chr10:14,260,269...14,273,019 		JBrowse link
regulation of dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mapk8 mitogen-activated protein kinase 8 involved_in IDA PMID:29166604 UniProt PMID:29166604 RGD:15023486 NCBI chr16:8,645,171...8,728,225
Ensembl chr16:8,638,924...8,721,981 		JBrowse link
regulation of postsynaptic dense core vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt4 synaptotagmin 4 involved_in ISO
IEA		 (PMID:19448629)
GO_REF:0000107		 RGD
Ensembl		 PMID:19448629 GO_REF:0000107 NCBI chr18:23,311,454...23,320,863
Ensembl chr18:23,038,378...23,046,332 		JBrowse link
regulation of presynaptic dense core granule exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G P2rx7 purinergic receptor P2X 7 involved_in EXP
IDA		 PMID:24037803 SynGO PMID:24037803 PMID:24037803 RGD:13702177, RGD:13702177 NCBI chr12:39,550,531...39,594,984
Ensembl chr12:33,879,745...33,934,619 		JBrowse link
G Rab11b RAB11B, member RAS oncogene family involved_in IDA
IMP		 PMID:14627637 SynGO PMID:14627637 PMID:14627637 RGD:8554199, RGD:8554199 NCBI chr 7:15,223,613...15,236,754
Ensembl chr 7:14,521,368...14,534,593 		JBrowse link
G Rab3a RAB3A, member RAS oncogene family involved_in IEA
ISO		 GO_REF:0000107
(PMID:31679900)		 Ensembl
RGD		 PMID:31679900 GO_REF:0000107 NCBI chr16:18,718,164...18,722,273
Ensembl chr16:18,684,188...18,688,336 		JBrowse link
G Unc13b unc-13 homolog B involved_in IMP
IEP
IDA		 PMID:31679900 SynGO PMID:31679900 PMID:31679900 PMID:31679900 RGD:155230690, RGD:155230690, RGD:155230690 NCBI chr 5:62,084,809...62,299,884
Ensembl chr 5:57,289,227...57,502,926 		JBrowse link
retrograde neuronal dense core vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A involved_in IGI
IBA		 PMID:28426968
GO_REF:0000033		 GO_Central PMID:28426968 GO_REF:0000033, RGD:13514087 NCBI chr 9:101,010,447...101,094,891
Ensembl chr 9:93,563,045...93,647,480 		JBrowse link
G Kif1b kinesin family member 1B involved_in IGI
IBA		 PMID:28426968
GO_REF:0000033		 GO_Central PMID:28426968 GO_REF:0000033, RGD:13514087 NCBI chr 5:164,890,778...165,025,848
Ensembl chr 5:159,561,271...159,742,778 		JBrowse link
G Kif1c kinesin family member 1C involved_in IGI
IBA		 PMID:28426968
GO_REF:0000033		 GO_Central PMID:28426968 GO_REF:0000033, RGD:13514087 NCBI chr10:55,913,010...55,942,220
Ensembl chr10:55,415,900...55,443,545 		JBrowse link
G Kif5a kinesin family member 5A involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 7:64,937,210...64,974,339
Ensembl chr 7:63,049,424...63,092,858 		JBrowse link
G Kif5b kinesin family member 5B involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr17:56,185,386...56,222,990
Ensembl chr17:51,489,944...51,527,508 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    localization 5739
      organelle localization 626
        vesicle localization 212
          secretory granule localization 35
            dense core granule localization 30
              dense core granule exocytosis + 18
              dense core granule transport + 13
              establishment of dense core granule localization 0
              maintenance of dense core granule location 0
paths to the root