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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of actin filament bundle assembly
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Accession:GO:0032231 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the assembly of actin filament bundles.
Synonyms:exact_synonym: regulation of actin cable assembly
 related_synonym: regulation of actin filament bundle formation



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regulation of actin filament bundle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flna filamin A involved_in ISO (PMID:20713593) RGD PMID:20713593 NCBI chr  X:157,159,051...157,185,559 JBrowse link
G Rdx radixin involved_in ISO (PMID:22467863) RGD PMID:22467863 NCBI chr 8:61,275,792...61,348,260 JBrowse link
negative regulation of actin filament bundle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfl1 cofilin 1 IMP RGD PMID:24093776 RGD:11570550 NCBI chr 1:212,227,124...212,230,656 JBrowse link
G Dbn1 drebrin 1 IDA RGD PMID:8769857 RGD:2317774 NCBI chr17:9,150,608...9,164,982 JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 IDA prevents phenylephrine-induced actin organization RGD PMID:9155015 RGD:2293527 NCBI chr 2:45,081,889...45,150,555 JBrowse link
G Pfn1 profilin 1 involved_in ISO (PMID:23153535) RGD PMID:23153535 NCBI chr10:55,863,882...55,866,587 JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO
IEA
(PMID:17512523)
GO_REF:0000107
RGD
Ensembl
PMID:17512523 GO_REF:0000107 NCBI chr 1:51,236,410...52,430,242 JBrowse link
G Shank1 SH3 and multiple ankyrin repeat domains 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:19208628)
BHF-UCL
RGD
PMID:19208628 GO_REF:0000024 NCBI chr 1:103,944,416...103,993,887 JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
(PMID:19208628)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:19208628 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:120,568,707...120,630,796 JBrowse link
negative regulation of stress fiber assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arap1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 involved_in ISO (PMID:11804590) RGD PMID:11804590 NCBI chr 1:165,160,701...165,226,219 JBrowse link
G Arhgap28 Rho GTPase activating protein 28 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:25211221)
GO_Central
RGD
PMID:25211221 GO_REF:0000033 NCBI chr 9:107,832,584...107,998,030 JBrowse link
G Arhgap6 Rho GTPase activating protein 6 involved_in ISO (PMID:10699171) RGD PMID:10699171 NCBI chr  X:24,953,464...25,490,003 JBrowse link
G Arhgef18 Rho/Rac guanine nucleotide exchange factor 18 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr12:1,395,035...1,503,082 JBrowse link
G Cgnl1 cingulin-like 1 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr 8:72,273,401...72,424,842 JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr13:32,046,362...32,267,954 JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr 8:122,555,532...122,736,934 JBrowse link
G Coro2b coronin 2B acts_upstream_of_or_within ISO MGI:4419137 (PMID:29162887) RGD PMID:29162887 NCBI chr 8:62,906,861...63,017,295 JBrowse link
G Dlc1 DLC1 Rho GTPase activating protein involved_in ISO
IEA
(PMID:17932950)
GO_REF:0000107
RGD
Ensembl
PMID:17932950 GO_REF:0000107 NCBI chr16:55,246,716...55,671,441 JBrowse link
G F11r F11 receptor involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr13:86,406,229...86,429,819 JBrowse link
G Frmd7 FERM domain containing 7 acts_upstream_of_or_within ISO (PMID:23967341) RGD PMID:23967341 NCBI chr  X:130,375,925...130,423,836 JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K involved_in ISO (PMID:12556481) RGD PMID:12556481 NCBI chr10:60,474,262...60,495,813 JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase involved_in ISO
IEA
(PMID:25198505)
GO_REF:0000107
RGD
Ensembl
PMID:25198505 GO_REF:0000107 NCBI chr 4:46,756,823...46,864,041 JBrowse link
G Mir138-1 microRNA 138-1 involved_in ISO (PMID:20232393) RGD PMID:20232393 NCBI chr 8:122,300,966...122,301,064 JBrowse link
G Mir138-2 microRNA 138-2 involved_in ISO (PMID:20232393) RGD PMID:20232393 NCBI chr19:10,674,193...10,674,274 JBrowse link
G Mir20a microRNA 20a involved_in ISO (PMID:22696064) RGD PMID:22696064 NCBI chr15:92,181,084...92,181,168 JBrowse link
G Mir21 microRNA 21 involved_in ISO (PMID:21347332) RGD PMID:21347332 NCBI chr10:71,902,600...71,902,691 JBrowse link
G Myoc myocilin involved_in ISO
IEA
ISS
(PMID:17984096)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:17984096 GO_REF:0000024 GO_REF:0000107 NCBI chr13:74,976,730...74,987,128 JBrowse link
G Oaz3 ornithine decarboxylase antizyme 3 IDA RGD PMID:21712390 RGD:7245493 NCBI chr 2:182,073,212...182,076,147 JBrowse link
G Pak2 p21 (RAC1) activated kinase 2 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr11:82,212,896...82,273,803 JBrowse link
G Pfn1 profilin 1 involved_in ISO
IEA
(PMID:23153535)
GO_REF:0000107
RGD
Ensembl
PMID:23153535 GO_REF:0000107 NCBI chr10:55,863,882...55,866,587 JBrowse link
G Phldb2 pleckstrin homology-like domain, family B, member 2 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr11:68,321,738...68,540,724 JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:11038173)
Ensembl
RGD
PMID:11038173 GO_REF:0000107 NCBI chr 2:34,612,946...34,697,660 JBrowse link
G Ppfia1 PTPRF interacting protein alpha 1 acts_upstream_of_or_within ISO (PMID:22266902) RGD PMID:22266902 NCBI chr 1:199,641,277...199,718,371 JBrowse link
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A IMP RGD PMID:12052877 RGD:1299363 NCBI chr 4:33,936,949...34,258,927 JBrowse link
G Rhpn1 rhophilin, Rho GTPase binding protein 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:25071083)
GO_Central
RGD
PMID:25071083 GO_REF:0000033 NCBI chr 7:107,391,948...107,402,713 JBrowse link
G Rhpn2 rhophilin, Rho GTPase binding protein 2 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:25071083)
GO_REF:0000033
RGD
GO_Central
PMID:25071083 GO_REF:0000033 NCBI chr 1:87,991,143...88,051,895 JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 IDA RGD PMID:11094076 RGD:1581790 NCBI chr 2:206,309,715...206,314,070 JBrowse link
G Stmn1 stathmin 1 involved_in ISO (PMID:25198505) RGD PMID:25198505 NCBI chr 5:151,964,308...151,970,843 JBrowse link
G Tacstd2 tumor-associated calcium signal transducer 2 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:22194864)
Ensembl
UniProt
RGD
PMID:22194864 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:96,707,950...96,709,650 JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr 1:128,260,330...128,505,018 JBrowse link
G Tmeff2 transmembrane protein with EGF-like and two follistatin-like domains 2 acts_upstream_of_or_within ISO (PMID:24632071) RGD PMID:24632071 NCBI chr 9:50,445,947...50,733,473 JBrowse link
G Tmsb15b2 thymosin beta 15B2 acts_upstream_of_or_within ISO (PMID:19233202) RGD PMID:19233202 NCBI chr  X:100,298,705...100,300,820 JBrowse link
G Was WASP actin nucleation promoting factor involved_in ISO (PMID:8625410) RGD PMID:8625410 NCBI chr  X:17,077,057...17,085,802 JBrowse link
G Wasf2 WASP family member 2 involved_in ISO (PMID:21107423) RGD PMID:21107423 NCBI chr 5:150,620,733...150,685,943 JBrowse link
positive regulation of actin filament bundle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cx3cl1 C-X3-C motif chemokine ligand 1 involved_in ISO
IEA
UniProtKB:P35411 (PMID:10415068)
GO_REF:0000107
RGD
Ensembl
PMID:10415068 GO_REF:0000107 NCBI chr19:10,233,326...10,244,856 JBrowse link
G ENSRNOG00000068258 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Flna filamin A IMP RGD PMID:22872576 RGD:7207404 NCBI chr  X:157,159,051...157,185,559 JBrowse link
G Id1 inhibitor of DNA binding 1 IMP RGD PMID:16628634 RGD:9686088 NCBI chr 3:161,671,525...161,672,691 JBrowse link
G Limk1 LIM domain kinase 1 involved_in ISO (PMID:17512523) RGD PMID:17512523 NCBI chr12:27,663,177...27,697,085 JBrowse link
G LOC102551431 profilin-2-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:60,478,445...60,478,837 JBrowse link
G Mk1 Mk1 protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,780,819...18,783,308 JBrowse link
G Mtss1 MTSS I-BAR domain containing 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:5319219 (PMID:21406566)
GO_Central
RGD
PMID:21406566 GO_REF:0000033 NCBI chr 7:90,488,751...90,628,007 JBrowse link
G Pfn1 profilin 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:55,863,882...55,866,587 JBrowse link
G Pfn2 profilin 2 involved_in ISO
IBA
(PMID:23153535)
GO_REF:0000033
RGD
GO_Central
PMID:23153535 GO_REF:0000033 NCBI chr 2:144,217,100...144,222,936 JBrowse link
G Pfn3 profilin 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:9,217,595...9,218,122 JBrowse link
G Plek pleckstrin involved_in ISO (PMID:10497244) RGD PMID:10497244 NCBI chr14:95,598,650...95,631,326 JBrowse link
G Swap70 switching B-cell complex subunit SWAP70 involved_in ISO (PMID:23921380) RGD PMID:23921380 NCBI chr 1:164,267,588...164,328,796 JBrowse link
G Synpo synaptopodin involved_in ISO
IBA
(PMID:15841212)
GO_REF:0000033
RGD
GO_Central
PMID:15841212 GO_REF:0000033 NCBI chr18:54,048,299...54,106,388 JBrowse link
G Synpo2 synaptopodin 2 involved_in ISO
IBA
(PMID:24005909)
GO_REF:0000033
RGD
GO_Central
PMID:24005909 GO_REF:0000033 NCBI chr 2:211,217,099...211,371,267 JBrowse link
G Synpo2l synaptopodin 2-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:3,681,224...3,690,673 JBrowse link
G Vil1 villin 1 involved_in ISO (PMID:19808673) RGD PMID:19808673 NCBI chr 9:75,991,141...76,018,860 JBrowse link
positive regulation of stress fiber assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO (PMID:24863063) RGD PMID:24863063 NCBI chr 3:35,377,587...35,480,843 JBrowse link
G Apoa1 apolipoprotein A1 involved_in ISO
IEA
(PMID:23726972)
GO_REF:0000107
RGD
Ensembl
PMID:23726972 GO_REF:0000107 NCBI chr 8:55,423,945...55,425,729 JBrowse link
G Arhgef10 Rho guanine nucleotide exchange factor 10 involved_in ISO
IBA
(PMID:16896804)
GO_REF:0000033
RGD
GO_Central
PMID:16896804 GO_REF:0000033 NCBI chr16:74,647,147...74,738,784 JBrowse link
G Arhgef10l Rho guanine nucleotide exchange factor 10 like involved_in ISO
IBA
(PMID:16112081)
GO_REF:0000033
RGD
GO_Central
PMID:16112081 GO_REF:0000033 NCBI chr 5:152,792,247...152,935,255 JBrowse link
G Arhgef15 Rho guanine nucleotide exchange factor 15 involved_in IDA PMID:12775584 UniProt PMID:12775584 RGD:8554375 NCBI chr10:53,650,521...53,663,269 JBrowse link
G Arhgef5 Rho guanine nucleotide exchange factor 5 involved_in ISO (PMID:15601624) RGD PMID:15601624 NCBI chr 4:72,087,205...72,112,316 JBrowse link
G Bag4 BAG cochaperone 4 involved_in ISO (PMID:21712384) RGD PMID:21712384 NCBI chr16:66,288,678...66,305,893 JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO MGI:104572 (PMID:15199148) RGD PMID:15199148 NCBI chr 4:69,329,772...69,476,931 JBrowse link
G Carmil1 capping protein regulator and myosin 1 linker 1 involved_in ISO (PMID:16054028) RGD PMID:16054028 NCBI chr17:40,807,921...41,088,326 JBrowse link
G Ccdc88a coiled coil domain containing 88A involved_in ISO (PMID:16139227) RGD PMID:16139227 NCBI chr14:103,104,091...103,256,112 JBrowse link
G Ccn2 cellular communication network factor 2 involved_in ISO
IEA
(PMID:20008146)
GO_REF:0000107
RGD
Ensembl
PMID:20008146 GO_REF:0000107 NCBI chr 1:22,621,498...22,624,614 JBrowse link
G Cd47 Cd47 molecule involved_in IMP PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chr11:64,374,816...64,438,763 JBrowse link
G Cdc42 cell division cycle 42 involved_in ISO (PMID:26051942), (PMID:8625410) RGD PMID:8625410 PMID:26051942 NCBI chr 5:154,838,478...154,876,629 JBrowse link
G Epha1 Eph receptor A1 involved_in ISS
ISO
GO_REF:0000024
(PMID:12775584)
UniProt
RGD
PMID:12775584 GO_REF:0000024 NCBI chr 4:72,213,022...72,227,543 JBrowse link
G Evl Enah/Vasp-like involved_in ISO
IEA
(PMID:23153535)
GO_REF:0000107
RGD
Ensembl
PMID:23153535 GO_REF:0000107 NCBI chr 6:127,473,119...127,594,342 JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in ISO (PMID:29496737) RGD PMID:29496737 NCBI chr15:21,162,603...21,257,995 JBrowse link
G Fhod1 formin homology 2 domain containing 1 involved_in ISO (PMID:15095401) RGD PMID:15095401 NCBI chr19:33,206,492...33,225,448 JBrowse link
G Gpr65 G-protein coupled receptor 65 involved_in ISO (PMID:15618224) RGD PMID:15618224 NCBI chr 6:117,515,786...117,536,514 JBrowse link
G Itgb1bp1 integrin subunit beta 1 binding protein 1 involved_in ISO (PMID:17654484) RGD PMID:17654484 NCBI chr 6:46,549,994...46,564,735 JBrowse link
G Kiss1r KISS1 receptor IDA RGD PMID:11457843 RGD:1357971 NCBI chr 7:9,785,135...9,790,283 JBrowse link
G Limch1 LIM and calponin homology domains 1 involved_in ISO
IBA
(PMID:28228547)
GO_REF:0000033
RGD
GO_Central
PMID:28228547 GO_REF:0000033 NCBI chr14:41,466,433...41,779,477 JBrowse link
G Limk1 LIM domain kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:88190 (PMID:15199148)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:15199148 GO_REF:0000033 GO_REF:0000107 NCBI chr12:27,663,177...27,697,085 JBrowse link
G Lpar1 lysophosphatidic acid receptor 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:9600933)
UniProt
RGD
PMID:9600933 GO_REF:0000024 NCBI chr 5:78,024,139...78,147,071 JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:15467718)
Ensembl
RGD
PMID:15467718 GO_REF:0000107 NCBI chr 5:164,167,985...164,277,438 JBrowse link
G Myoc myocilin involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:19188438)
Ensembl
UniProt
RGD
PMID:19188438 GO_REF:0000024 GO_REF:0000107 NCBI chr13:74,976,730...74,987,128 JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor involved_in ISO
IEA
(PMID:9537418)
GO_REF:0000107
RGD
Ensembl
PMID:9537418 GO_REF:0000107 NCBI chr14:79,627,399...79,710,709 JBrowse link
G Nox4 NADPH oxidase 4 IMP RGD PMID:17511984 RGD:2324670 NCBI chr 1:150,313,736...150,491,480 JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (PMID:26051942) RGD PMID:26051942 NCBI chr19:73,256,557...73,411,705 JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 involved_in ISO
ISS
(PMID:11864573)
GO_REF:0000024
RGD
UniProt
PMID:11864573 GO_REF:0000024 NCBI chr 1:161,522,399...161,637,623 JBrowse link
G Pdlim4 PDZ and LIM domain 4 involved_in IDA
IMP
PMID:14729062
PMID:22659164
UniProt PMID:14729062 PMID:22659164 RGD:1300470, RGD:13432282 NCBI chr10:38,198,686...38,212,935 JBrowse link
G Pfn1 profilin 1 IMP RGD PMID:12740026 RGD:2324854 NCBI chr10:55,863,882...55,866,587 JBrowse link
G Pfn2 profilin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:23153535)
Ensembl
RGD
PMID:23153535 GO_REF:0000107 NCBI chr 2:144,217,100...144,222,936 JBrowse link
G Ppm1e protein phosphatase, Mg2+/Mn2+ dependent, 1E involved_in ISO
IBA
(PMID:11864573)
GO_REF:0000033
RGD
GO_Central
PMID:11864573 GO_REF:0000033 NCBI chr10:72,548,906...72,684,702 JBrowse link
G Ppm1f protein phosphatase, Mg2+/Mn2+ dependent, 1F involved_in ISO
IBA
RNAcentral:URS00001C770D_9606 (PMID:11864573), (PMID:20016286), (PMID:26498692)
GO_REF:0000033
RGD
GO_Central
PMID:11864573 PMID:20016286 PMID:26498692 GO_REF:0000033 NCBI chr11:84,064,422...84,094,410 JBrowse link
G Prkcq protein kinase C, theta IMP RGD PMID:9353339 RGD:1625621 NCBI chr17:72,156,215...72,288,508 JBrowse link
G Pxn paxillin involved_in ISO (PMID:24863063) RGD PMID:24863063 NCBI chr12:41,060,791...41,107,952 JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO
IEA
(PMID:23129259), (PMID:8625410)
GO_REF:0000107
RGD
Ensembl
PMID:8625410 PMID:23129259 GO_REF:0000107 NCBI chr12:16,150,411...16,170,864 JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 involved_in ISO
IEA
ISS
(PMID:21840392)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21840392 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:128,875,772...128,898,203 JBrowse link
G Rgcc regulator of cell cycle involved_in ISO (PMID:19158077) RGD PMID:19158077 NCBI chr15:54,662,483...54,675,320 JBrowse link
G Rhoa ras homolog family member A involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:8625410)
(PMID:25071083)
GO_REF:0000107
(PMID:15467718)
RGD
Ensembl
PMID:8625410 PMID:15467718 PMID:25071083 GO_REF:0000107 NCBI chr 8:117,870,548...117,904,303 JBrowse link
G Rhoc ras homolog family member C involved_in ISO (PMID:20232393) RGD PMID:20232393 NCBI chr 2:192,287,065...192,293,292 JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:20232393), (PMID:39106863)
Ensembl
RGD
PMID:20232393 PMID:39106863 GO_REF:0000107 NCBI chr 6:45,407,823...45,502,773 JBrowse link
G S100a10 S100 calcium binding protein A10 involved_in ISO
IEA
(PMID:23129259)
GO_REF:0000107
RGD
Ensembl
PMID:23129259 GO_REF:0000107 NCBI chr 2:179,221,012...179,229,659 JBrowse link
G Sdc4 syndecan 4 IMP RGD PMID:10504291 RGD:2312327 NCBI chr 3:153,154,888...153,173,576 JBrowse link
G Serpinf2 serpin family F member 2 involved_in ISO (PMID:20008146) RGD PMID:20008146 NCBI chr10:60,272,400...60,280,506 JBrowse link
G Sh3pxd2b SH3 and PX domains 2B involved_in ISO (PMID:27711054) RGD PMID:27711054 NCBI chr10:17,422,906...17,538,977 JBrowse link
G Smad3 SMAD family member 3 IDA during transdifferentiation RGD PMID:15987742 RGD:2300418 NCBI chr 8:64,126,829...64,236,960 JBrowse link
G Sorbs3 sorbin and SH3 domain containing 3 involved_in ISO (PMID:9885244) RGD PMID:9885244 NCBI chr15:45,252,921...45,284,758 JBrowse link
G Synpo2l synaptopodin 2-like involved_in ISO (PMID:29206857) RGD PMID:29206857 NCBI chr15:3,681,224...3,690,673 JBrowse link
G Tac1 tachykinin, precursor 1 IDA RGD PMID:17435548 RGD:2304338 NCBI chr 4:36,645,344...36,653,548 JBrowse link
G Tacr1 tachykinin receptor 1 IMP RGD PMID:17435548 RGD:2304338 NCBI chr 4:116,478,617...116,647,492 JBrowse link
G Tesk1 testis associated actin remodelling kinase 1 involved_in IDA
IBA
PMID:18216281
GO_REF:0000033
GO_Central PMID:18216281 GO_REF:0000033, RGD:13461749 NCBI chr 5:62,487,763...62,493,492 JBrowse link
G Tgfb3 transforming growth factor, beta 3 involved_in ISO (PMID:18718461) RGD PMID:18718461 NCBI chr 6:111,435,170...111,457,646 JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:P10600 (PMID:18718461)
Ensembl
RGD
PMID:18718461 GO_REF:0000107 NCBI chr 5:66,449,348...66,506,371 JBrowse link
G Tpm1 tropomyosin 1 involved_in IGI PMID:15897890 BHF-UCL PMID:15897890 RGD:8656006 NCBI chr 8:67,635,479...67,662,330 JBrowse link
G Tsc1 TSC complex subunit 1 IMP RGD PMID:15611338 RGD:1601406 NCBI chr 3:32,367,434...32,416,565 JBrowse link
G Wnt4 Wnt family member 4 involved_in ISO
IEA
UniProtKB:P01112 (PMID:23027131)
GO_REF:0000107
RGD
Ensembl
PMID:23027131 GO_REF:0000107 NCBI chr 5:154,797,245...154,818,565 JBrowse link
regulation of stress fiber assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actg1 actin, gamma 1 involved_in ISO
IEA
(PMID:25705373)
GO_REF:0000107
RGD
Ensembl
PMID:25705373 GO_REF:0000107 NCBI chr10:106,118,106...106,120,951 JBrowse link
G Actg1l1 actin, gamma 1 like 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:72,977,767...72,979,691 JBrowse link
G Alms1 ALMS1, centrosome and basal body associated protein acts_upstream_of_or_within ISO (PMID:22693585) RGD PMID:22693585 NCBI chr 4:119,683,085...119,783,471 JBrowse link
G Asap3 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 involved_in ISO
IBA
(PMID:18400762)
GO_REF:0000033
RGD
GO_Central
PMID:18400762 GO_REF:0000033 NCBI chr 5:153,716,988...153,757,787 JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:3055492 (PMID:23716571) RGD PMID:23716571 NCBI chr 8:59,731,912...59,765,408 JBrowse link
G Cdc42 cell division cycle 42 involved_in ISO UniProtKB:P42768 (PMID:8625410) RGD PMID:8625410 NCBI chr 5:154,838,478...154,876,629 JBrowse link
G Fhod1 formin homology 2 domain containing 1 involved_in ISO (PMID:16361249) RGD PMID:16361249 NCBI chr19:33,206,492...33,225,448 JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO MGI:3608879 (PMID:23716571) RGD PMID:23716571 NCBI chr 3:144,654,563...144,672,831 JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 acts_upstream_of_or_within ISO MGI:2149438 (PMID:25217619) RGD PMID:25217619 NCBI chr 2:34,612,946...34,697,660 JBrowse link
G Pik3r2 phosphoinositide-3-kinase regulatory subunit 2 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:2159732 (PMID:25217619)
GO_REF:0000107
RGD
Ensembl
PMID:25217619 GO_REF:0000107 NCBI chr16:18,699,389...18,708,045 JBrowse link
G Ptger4 prostaglandin E receptor 4 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:14665434)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:14665434 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:56,061,699...56,074,594 JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO UniProtKB:P42768 (PMID:8625410) RGD PMID:8625410 NCBI chr12:16,150,411...16,170,864 JBrowse link
G Synpo synaptopodin involved_in ISO (PMID:15841212) RGD PMID:15841212 NCBI chr18:54,048,299...54,106,388 JBrowse link
G Tsc1 TSC complex subunit 1 involved_in ISO
IEA
(PMID:10806479)
GO_REF:0000107
RGD
Ensembl
PMID:10806479 GO_REF:0000107 NCBI chr 3:32,367,434...32,416,565 JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 acts_upstream_of_or_within ISO (PMID:23716571) RGD PMID:23716571 NCBI chr 6:118,198,186...118,252,422 JBrowse link
G Was WASP actin nucleation promoting factor involved_in ISO UniProtKB:P60953|UniProtKB:P63000 (PMID:8625410) RGD PMID:8625410 NCBI chr  X:17,077,057...17,085,802 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20534
    cellular process 19523
      regulation of cellular process 13013
        regulation of cellular component biogenesis 1157
          regulation of actin filament bundle assembly 119
            negative regulation of actin filament bundle assembly + 41
            positive regulation of actin filament bundle assembly + 70
            regulation of formin-nucleated actin cable assembly + 0
            regulation of stress fiber assembly + 100
Path 2
Term Annotations click to browse term
  biological_process 20534
    cellular process 19523
      cellular component organization or biogenesis 7187
        cellular component organization 6903
          organelle organization 3691
            cytoskeleton organization 1582
              actin cytoskeleton organization 763
                actin filament organization 501
                  actin filament bundle organization 190
                    actin filament bundle assembly 187
                      regulation of actin filament bundle assembly 119
                        negative regulation of actin filament bundle assembly + 41
                        positive regulation of actin filament bundle assembly + 70
                        regulation of formin-nucleated actin cable assembly + 0
                        regulation of stress fiber assembly + 100
paths to the root