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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of synaptic transmission, GABAergic
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Accession:GO:0032228 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA).


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regulation of synaptic transmission, GABAergic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baiap3 BAI1-associated protein 3 ISO (MGI:MGI:5638520|PMID:23698091) RGD PMID:23698091 MGI:MGI:5638520 NCBI chr10:14,601,133...14,613,881
Ensembl chr10:14,599,197...14,613,878
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (MGI:MGI:6111006|PMID:29135436) RGD PMID:29135436 MGI:MGI:6111006 NCBI chr 1:197,986,384...197,999,726
Ensembl chr 1:197,986,385...197,997,664
JBrowse link
G Cnr1 cannabinoid receptor 1 IMP RGD PMID:19725112 RGD:2314643 NCBI chr 5:49,307,584...49,333,064
Ensembl chr 5:49,311,030...49,333,056
JBrowse link
G Cntnap4 contactin associated protein family member 4 ISO (MGI:MGI:5574524|PMID:24870235) RGD PMID:24870235 MGI:MGI:5574524 NCBI chr19:44,817,727...45,118,133
Ensembl chr19:44,908,905...45,117,309
JBrowse link
G Dbi diazepam binding inhibitor, acyl-CoA binding protein IDA PMID:3456171 MGI PMID:3456171 RGD:8554715 NCBI chr13:36,147,667...36,156,076
Ensembl chr13:36,117,119...36,174,908
JBrowse link
G Drd2 dopamine receptor D2 ISO MGI:MGI:2387895|MGI:MGI:2675755|MGI:MGI:99402 (MGI:MGI:3050921|PMID:15080900), (MGI:MGI:3628700|PMID:15489038), (MGI:MGI:3655944|PMID:10934242) RGD PMID:10934242, PMID:15080900, PMID:15489038 MGI:MGI:3050921, MGI:MGI:3628700, MGI:MGI:3655944 NCBI chr 8:53,678,777...53,743,643
Ensembl chr 8:53,678,777...53,743,642
JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO MGI:MGI:97306 (MGI:MGI:2157992|PMID:11793011) RGD PMID:11793011 MGI:MGI:2157992 NCBI chr 4:179,482,562...179,515,483
Ensembl chr 4:179,486,105...179,515,558
JBrowse link
G Nf1 neurofibromin 1 ISO
IEA
MGI:MGI:96680 (MGI:MGI:2157992|PMID:11793011)
GO_REF:0000107
RGD
Ensembl
PMID:11793011 GO_REF:0000107, MGI:MGI:2157992 NCBI chr10:66,732,460...66,928,706
Ensembl chr10:66,690,133...66,928,903
JBrowse link
G Nisch nischarin IMP RGD PMID:16467528 RGD:1582692 NCBI chr16:7,254,372...7,290,670
Ensembl chr16:7,254,974...7,290,561
JBrowse link
G Npas4 neuronal PAS domain protein 4 ISO
ISS
(MGI:MGI:3826741|PMID:18815592)
GO_REF:0000024
RGD
UniProt
PMID:18815592 GO_REF:0000024, MGI:MGI:3826741 NCBI chr 1:220,260,310...220,278,177
Ensembl chr 1:220,261,008...220,265,772
JBrowse link
G Phf24 PHD finger protein 24 ISO MGI:MGI:5706936 (MGI:MGI:5616490|PMID:25242222) RGD PMID:25242222 MGI:MGI:5616490 NCBI chr 5:58,359,744...58,387,446
Ensembl chr 5:58,359,498...58,383,070
JBrowse link
G Plcl1 phospholipase C-like 1 IEA
ISO
GO_REF:0000107
GO_REF:0000002
MGI:MGI:1352756|MGI:MGI:3526123 (MGI:MGI:3055253|PMID:15464766), (MGI:MGI:3694324|PMID:16754670)
Ensembl
InterPro
RGD
PMID:15464766, PMID:16754670 GO_REF:0000002, GO_REF:0000107, MGI:MGI:3055253, MGI:MGI:3694324 NCBI chr 9:62,016,112...62,349,244
Ensembl chr 9:62,291,405...62,349,309
JBrowse link
G Plcl2 phospholipase C-like 2 ISO MGI:MGI:3036262 (MGI:MGI:3694324|PMID:16754670) RGD PMID:16754670 MGI:MGI:3694324 NCBI chr 9:1,782,536...1,984,654
Ensembl chr 9:1,782,536...1,984,654
JBrowse link
G Pten phosphatase and tensin homolog ISO MGI:MGI:2156086 (MGI:MGI:5584033|PMID:24875179) RGD PMID:24875179 MGI:MGI:5584033 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Usp46 ubiquitin specific peptidase 46 ISO (MGI:MGI:3850588|PMID:19465912) RGD PMID:19465912 MGI:MGI:3850588 NCBI chr14:36,687,134...36,755,360
Ensembl chr14:36,687,134...36,755,360
JBrowse link
negative regulation of synaptic transmission, GABAergic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor NOT IMP
IDA
in immature hippocampal CA1 neurons
in postnatal 30 day hippocampal CA1 neurons
RGD PMID:12626609, PMID:12626609 RGD:1625273, RGD:1625273 NCBI chr13:51,042,111...51,076,913
Ensembl chr13:51,042,248...51,076,852
JBrowse link
G Bdnf brain-derived neurotrophic factor ISO (MGI:MGI:3694324|PMID:16754670) RGD PMID:16754670 MGI:MGI:3694324 NCBI chr 3:100,768,637...100,819,216
Ensembl chr 3:100,768,637...100,819,210
JBrowse link
G Cnr2 cannabinoid receptor 2 IMP RGD PMID:19616018 RGD:2316192 NCBI chr 5:154,242,010...154,268,126
Ensembl chr 5:154,260,062...154,268,126
JBrowse link
G Grik1 glutamate ionotropic receptor kainate type subunit 1 IDA RGD PMID:12533604 RGD:1642497 NCBI chr11:27,811,954...28,213,940
Ensembl chr11:27,811,957...27,971,359
JBrowse link
G Htr1b 5-hydroxytryptamine receptor 1B IMP RGD PMID:17229091 RGD:1626455 NCBI chr 8:89,113,984...89,130,830
Ensembl chr 8:89,129,453...89,130,991
JBrowse link
G Npy5r neuropeptide Y receptor Y5 IMP RGD PMID:11796508 RGD:1625505 NCBI chr16:24,796,685...24,805,730
Ensembl chr16:24,797,124...24,805,079
JBrowse link
G Slc6a1 solute carrier family 6 member 1 IMP RGD PMID:17317750 RGD:1643193 NCBI chr 4:146,258,842...146,292,176
Ensembl chr 4:146,276,862...146,292,213
JBrowse link
G Stxbp1 syntaxin binding protein 1 ISO (MGI:MGI:3691953|PMID:17167098) RGD PMID:17167098 MGI:MGI:3691953 NCBI chr 3:11,823,779...11,885,479
Ensembl chr 3:11,823,785...11,885,417
JBrowse link
positive regulation of synaptic transmission, GABAergic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor ISO MGI:MGI:94924 (MGI:MGI:3655944|PMID:10934242) RGD PMID:10934242 MGI:MGI:3655944 NCBI chr20:14,265,251...14,282,873
Ensembl chr20:14,265,252...14,282,873
JBrowse link
G Adra1a adrenoceptor alpha 1A IDA RGD PMID:14532911 RGD:1625778 NCBI chr15:43,296,997...43,398,314
Ensembl chr15:43,298,794...43,392,451
JBrowse link
G Car2 carbonic anhydrase 2 ISO MGI:MGI:103100 (MGI:MGI:5506965|PMID:23881097) RGD PMID:23881097 MGI:MGI:5506965 NCBI chr 2:88,097,740...88,112,868
Ensembl chr 2:88,097,720...88,113,029
JBrowse link
G Car7 carbonic anhydrase 7 ISO MGI:MGI:88269 (MGI:MGI:5506965|PMID:23881097) RGD PMID:23881097 MGI:MGI:5506965 NCBI chr19:636,545...645,935
Ensembl chr19:636,545...645,937
JBrowse link
G Cckbr cholecystokinin B receptor IMP RGD PMID:17904218 RGD:2311326 NCBI chr 1:170,262,218...170,272,298
Ensembl chr 1:170,262,156...170,272,298
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 IMP RGD PMID:17521572 RGD:2289989 NCBI chr 9:75,021,790...76,178,936
Ensembl chr 9:75,021,790...75,528,644
JBrowse link
G Grik1 glutamate ionotropic receptor kainate type subunit 1 IDA
ISO
MGI:MGI:2176347 (MGI:MGI:3769099|PMID:17245443) RGD PMID:17245443, PMID:12533604 MGI:MGI:3769099, RGD:1642497 NCBI chr11:27,811,954...28,213,940
Ensembl chr11:27,811,957...27,971,359
JBrowse link
G Hap1 huntingtin-associated protein 1 IDA
IMP
PMID:20152113 UniProt PMID:20152113, PMID:20152113 RGD:10047142, RGD:10047142 NCBI chr10:88,257,975...88,266,210
Ensembl chr10:88,257,976...88,266,210
JBrowse link
G Kif5b kinesin family member 5B ISO (MGI:MGI:5582163|PMID:20152113) RGD PMID:20152113 MGI:MGI:5582163 NCBI chr17:54,181,416...54,219,048
Ensembl chr17:54,181,419...54,212,096
JBrowse link
G Nlgn1 neuroligin 1 IDA PMID:12930820 BHF-UCL PMID:12930820 RGD:8554754 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
G Nlgn2 neuroligin 2 ISO
ISS
IEA
(MGI:MGI:5284797|PMID:15620359)
GO_REF:0000024
GO_REF:0000107
RGD
BHF-UCL
Ensembl
PMID:15620359 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5284797 NCBI chr10:56,431,586...56,444,847
Ensembl chr10:56,431,573...56,444,847
JBrowse link
G Nps neuropeptide S ISO
IBA
(MGI:MGI:4950795|PMID:21437203)
PMID:21873635
RGD PMID:21437203, PMID:21873635 MGI:MGI:4950795, RGD:13792537 NCBI chr 1:207,508,414...207,512,195
Ensembl chr 1:207,508,414...207,512,195
JBrowse link
G Oxtr oxytocin receptor IMP RGD PMID:11069593 RGD:2304220 NCBI chr 4:144,399,326...144,417,598
Ensembl chr 4:144,403,358...144,416,116
JBrowse link
G Prkce protein kinase C, epsilon ISO MGI:MGI:2152043 (MGI:MGI:3762436|PMID:17875639) RGD PMID:17875639 MGI:MGI:3762436 NCBI chr 6:9,483,400...9,973,396
Ensembl chr 6:9,790,422...9,973,396
JBrowse link
G Tac1 tachykinin, precursor 1 IDA RGD PMID:19261870 RGD:2304250 NCBI chr 4:33,638,853...33,646,819
Ensembl chr 4:33,638,709...33,646,819
JBrowse link
G Tacr1 tachykinin receptor 1 IMP RGD PMID:19261870 RGD:2304250 NCBI chr 4:113,247,236...113,416,139
Ensembl chr 4:113,247,795...113,414,504
JBrowse link
G Zdhhc12 zinc finger DHHC-type palmitoyltransferase 12 ISS
ISO
GO_REF:0000024
(MGI:MGI:5586946|PMID:25025157)
UniProt
RGD
PMID:25025157 GO_REF:0000024, MGI:MGI:5586946 NCBI chr 3:8,656,397...8,659,102
Ensembl chr 3:8,656,412...8,659,102
JBrowse link
G Zdhhc3 zinc finger DHHC-type palmitoyltransferase 3 ISO (MGI:MGI:6393119|PMID:17151279) RGD PMID:17151279 MGI:MGI:6393119 NCBI chr 8:132,156,216...132,204,484
Ensembl chr 8:132,160,172...132,189,388
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20027
    signaling 7583
      regulation of signaling 3492
        regulation of trans-synaptic signaling 657
          modulation of chemical synaptic transmission 656
            regulation of synaptic transmission, GABAergic 40
              negative regulation of synaptic transmission, GABAergic 8
              positive regulation of synaptic transmission, GABAergic 18
Path 2
Term Annotations click to browse term
  biological_process 20027
    cellular process 18798
      cell communication 7664
        cell-cell signaling 1738
          synaptic signaling 917
            trans-synaptic signaling 889
              anterograde trans-synaptic signaling 880
                chemical synaptic transmission 880
                  synaptic transmission, GABAergic 63
                    regulation of synaptic transmission, GABAergic 40
                      negative regulation of synaptic transmission, GABAergic 8
                      positive regulation of synaptic transmission, GABAergic 18
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.