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ONTOLOGY REPORT - ANNOTATIONS


Term:transposition
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Accession:GO:0032196 term browser browse the term
Definition:Any process involved in mediating the movement of discrete segments of DNA between nonhomologous sites.
Synonyms:xref: Wikipedia:Transposon


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negative regulation of transposition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation-induced cytidine deaminase involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 4:155,359,909...155,371,104
Ensembl chr 4:155,359,921...155,369,671
JBrowse link
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:5285175|PMID:16527742)
PMID:21873635
(PMID:18779051), (PMID:18827027), (PMID:20062055)
UniProt
RGD
PMID:16527742 PMID:18779051 PMID:18827027 PMID:20062055, PMID:21873635, PMID:21873635 GO_REF:0000024 MGI:5285175, RGD:13792537, RGD:13792537 NCBI chr 7:121,108,108...121,128,346
Ensembl chr 7:121,109,241...121,128,542
JBrowse link
G Btbd18 BTB domain containing 18 involved_in ISO
IBA
(MGI:5882241|PMID:28292424)
PMID:21873635
RGD PMID:28292424, PMID:21873635, PMID:21873635 MGI:5882241, RGD:13792537, RGD:13792537 NCBI chr 3:72,060,811...72,070,566
Ensembl chr 3:72,063,504...72,069,534
JBrowse link
G Ddx4 DEAD-box helicase 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:5908740|PMID:28633017)
UniProt
RGD
PMID:28633017 GO_REF:0000024 MGI:5908740 NCBI chr 2:44,447,610...44,504,263
Ensembl chr 2:44,447,573...44,504,354
JBrowse link
G Dnmt3l DNA methyltransferase 3 like acts_upstream_of_or_within
involved_in
IEA
ISO
GO_REF:0000107
MGI:2155766 (MGI:5694015|PMID:25503965)
Ensembl
RGD
PMID:25503965 GO_REF:0000107 MGI:5694015 NCBI chr20:11,344,513...11,359,090
Ensembl chr20:11,344,514...11,359,090
JBrowse link
G Morc1 MORC family CW-type zinc finger 1 acts_upstream_of_or_within ISO MGI:1857787 (MGI:5694015|PMID:25503965) RGD PMID:25503965 MGI:5694015 NCBI chr11:54,762,654...55,044,581
Ensembl chr11:54,762,654...55,044,581
JBrowse link
G Mybl1 MYB proto-oncogene like 1 involved_in ISO (MGI:5495879|PMID:23523368) RGD PMID:23523368 MGI:5495879 NCBI chr 5:9,279,756...9,315,112
Ensembl chr 5:9,279,970...9,315,114
JBrowse link
G Piwil1 piwi-like RNA-mediated gene silencing 1 involved_in ISO (MGI:5316869|PMID:22121019) RGD PMID:22121019 MGI:5316869 NCBI chr12:31,608,641...31,629,961
Ensembl chr12:31,609,053...31,629,881
JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 involved_in ISO (MGI:5319753|PMID:22020280), (MGI:5501381|PMID:23706823) RGD PMID:22020280 PMID:23706823 MGI:5319753 MGI:5501381 NCBI chr15:52,037,693...52,116,277
Ensembl chr15:52,037,693...52,116,001
JBrowse link
G Piwil4 piwi-like RNA-mediated gene silencing 4 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(MGI:5319753|PMID:22020280)
MGI:3712153 (MGI:5694015|PMID:25503965)
MGI:3712153 (MGI:5319753|PMID:22020280), (MGI:5694015|PMID:25503965)
UniProt
RGD
PMID:22020280 PMID:25503965 GO_REF:0000024 MGI:5319753 MGI:5694015 NCBI chr 8:13,208,774...13,251,970
Ensembl chr 8:13,208,774...13,251,812
JBrowse link
G Sirt7 sirtuin 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:6377981|PMID:31226208)
UniProt
RGD
PMID:31226208 GO_REF:0000024 MGI:6377981 NCBI chr10:109,796,046...109,802,821
Ensembl chr10:109,796,020...109,802,739
JBrowse link
G Spocd1 SPOC domain containing 1 involved_in ISO (MGI:6453929|PMID:32674113) RGD PMID:32674113 MGI:6453929 NCBI chr 5:148,138,309...148,166,567 JBrowse link
G Tdrd9 tudor domain containing 9 acts_upstream_of_or_within
involved_in
ISS
ISO
IBA
GO_REF:0000024
(MGI:5824447|PMID:27473657)
(MGI:5908740|PMID:28633017)
PMID:21873635
(MGI:5824447|PMID:27473657), (MGI:5908740|PMID:28633017)
UniProt
RGD
PMID:27473657 PMID:28633017, PMID:21873635, PMID:21873635 GO_REF:0000024 MGI:5824447 MGI:5908740, RGD:13792537, RGD:13792537 NCBI chr 6:136,536,636...136,650,481
Ensembl chr 6:136,536,736...136,649,859
JBrowse link
G Tex15 testis expressed 15, meiosis and synapsis associated involved_in ISO (MGI:6434559|PMID:32381626), (MGI:6447460|PMID:32719317) RGD PMID:32381626 PMID:32719317 MGI:6434559 MGI:6447460 NCBI chr16:62,313,284...62,373,288
Ensembl chr16:62,313,263...62,373,253
JBrowse link
G Tex19.1 testis expressed 19.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr10:110,346,453...110,348,655
Ensembl chr10:110,346,453...110,348,652
JBrowse link
G Tex19.2 testis expressed gene 19.2 involved_in ISO
IBA
(PMID:28806172)
PMID:21873635
RGD PMID:28806172, PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr10:110,305,926...110,308,514
Ensembl chr10:110,305,928...110,308,514
JBrowse link
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 involved_in ISO (MGI:5912961|PMID:28806172) RGD PMID:28806172 MGI:5912961 NCBI chr 9:16,003,058...16,080,152
Ensembl chr 9:16,003,058...16,080,152
JBrowse link
negative regulation of transposition, RNA-mediated term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mov10 Mov10 RISC complex RNA helicase involved_in ISO (PMID:23093941), (PMID:30122351)
(MGI:6099622|PMID:28662698)
RGD PMID:23093941 PMID:28662698 PMID:30122351 MGI:6099622 NCBI chr 2:207,277,088...207,301,245
Ensembl chr 2:207,278,161...207,300,854
JBrowse link
G Tut4 terminal uridylyl transferase 4 involved_in ISO (PMID:30122351) RGD PMID:30122351 NCBI chr 5:128,063,880...128,168,726
Ensembl chr 5:128,083,118...128,168,207
JBrowse link
G Tut7 terminal uridylyl transferase 7 involved_in ISO (PMID:30122351) RGD PMID:30122351 NCBI chr17:5,225,854...5,279,674
Ensembl chr17:5,225,835...5,271,794
JBrowse link
non-replicative transposition, DNA-mediated term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgbd5 piggyBac transposable element derived 5 involved_in ISO
IBA
(PMID:26406119)
PMID:21873635
RGD PMID:26406119, PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr19:57,126,110...57,192,182
Ensembl chr19:57,127,054...57,192,095
JBrowse link
transposition, DNA-mediated term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC107597.2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 8:70,269,101...70,270,309 JBrowse link
G AC115371.2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr15:33,478,148...33,479,356 JBrowse link
G AC142178.3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr11:36,588,404...36,589,612 JBrowse link
transposition, RNA-mediated term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07004232.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr 1:131,584,306...131,585,731 JBrowse link
G AABR07007544.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr 2:17,939,270...17,939,794 JBrowse link
G AABR07008293.3 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr 2:52,152,536...52,153,557 JBrowse link
G AABR07008681.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr 2:70,490,155...70,497,730 JBrowse link
G AABR07011700.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr 2:166,475,070...166,476,119 JBrowse link
G AABR07011733.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr 2:167,606,660...167,607,919 JBrowse link
G AABR07013425.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr 2:236,822,072...236,823,145 JBrowse link
G AABR07018132.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr15:42,270,040...42,271,443 JBrowse link
G AABR07018556.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr15:64,939,527...64,941,035 JBrowse link
G AABR07037395.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr  X:19,854,836...19,855,909 JBrowse link
G AABR07038567.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr  X:55,331,389...55,333,042 JBrowse link
G AABR07039694.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr  X:82,710,329...82,711,680 JBrowse link
G AABR07040936.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr  X:115,208,863...115,222,228 JBrowse link
G AABR07042361.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr  X:153,677,811...153,678,884 JBrowse link
G AABR07043347.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr19:27,603,307...27,604,497 JBrowse link
G AABR07045337.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr20:43,584,123...43,607,996 JBrowse link
G AABR07053613.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr 3:116,072,294...116,073,367 JBrowse link
G AABR07057961.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr 7:96,195,209...96,196,192 JBrowse link
G AABR07061801.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr 4:144,916,789...144,917,494 JBrowse link
G AABR07064590.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr 6:86,160,266...86,161,333 JBrowse link
G AABR07064622.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr 6:87,426,080...87,427,153 JBrowse link
G AABR07067082.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr 9:29,584,375...29,585,448 JBrowse link
G AABR07070416.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr 8:69,505,635...69,508,024 JBrowse link
G AC102976.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr19:24,655,626...24,656,999 JBrowse link
G AC112624.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr14:43,854,108...43,855,745 JBrowse link
G AC123427.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr 2:7,648,625...7,651,673 JBrowse link
G AC127076.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr 5:4,926,731...4,927,570 JBrowse link
G AC132740.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr 8:77,978,304...77,979,785 JBrowse link
G L1td1 LINE-1 type transposase domain containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 5:117,347,998...117,361,012
Ensembl chr 5:117,354,794...117,360,654
JBrowse link
G LOC100364265 ribosomal protein L19-like involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 5:16,766,958...16,782,819
Ensembl chr 5:16,767,024...16,782,647
JBrowse link
G LOC317588 hypothetical protein LOC317588 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr  X:137,934,296...137,952,151
Ensembl chr  X:137,934,484...137,952,150
JBrowse link
G LOC498826 LRRGT00165 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr18:15,271,919...15,284,077
Ensembl chr18:15,272,571...15,284,077
JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (MGI:6103025|PMID:28835460) RGD PMID:28835460 MGI:6103025 NCBI chr 8:117,796,127...117,797,427
Ensembl chr 8:117,796,128...117,797,427
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20082
    cellular process 18900
      transposition 57
        MITE transposition 0
        negative regulation of transposition + 20
        positive regulation of transposition + 0
        regulation of transposition + 20
        transposition, DNA-mediated + 4
        transposition, RNA-mediated + 36
        transposon integration + 0
paths to the root