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ONTOLOGY REPORT - ANNOTATIONS


Term:Golgi cisterna
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Accession:GO:0031985 term browser browse the term
Definition:Any of the thin, flattened membrane-bounded compartments that form the central portion of the Golgi complex.
Synonyms:related_synonym: Golgi lamellae
 xref: NIF_Subcellular:sao561419532



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Golgi cisterna term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACP3 acid phosphatase 3 ISO RGD PMID:977936 RGD:2299977 NCBI chr 3:129,392,396...129,465,962
Ensembl chr 3:136,713,816...136,764,655
JBrowse link
G BET1 Bet1 golgi vesicular membrane trafficking protein ISO RGD PMID:8621431 RGD:69776 NCBI chr 7:85,947,997...85,959,151
Ensembl chr 7:99,539,001...99,550,125
JBrowse link
G CIT citron rho-interacting serine/threonine kinase ISO RGD PMID:14595335 RGD:1358646 NCBI chr12:117,264,627...117,456,069
Ensembl chr12:120,641,747...120,832,511
JBrowse link
G FURIN furin, paired basic amino acid cleaving enzyme ISO RGD PMID:16541018 RGD:1582625 NCBI chr15:69,560,774...69,576,007
Ensembl chr15:88,763,269...88,774,023
JBrowse link
G GCNT1 glucosaminyl (N-acetyl) transferase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:48,333,104...48,400,128
Ensembl chr 9:75,363,369...75,364,655
JBrowse link
G GGTA1 glycoprotein alpha-galactosyltransferase 1 (inactive) located_in ISO PMID:17206613 UniProt PMID:17206613 RGD:2307253 NCBI chr 9:92,572,948...92,631,563 JBrowse link
G GOLGA5 golgin A5 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:73,430,700...73,475,979
Ensembl chr14:92,770,342...92,815,444
JBrowse link
G GOLPH3 golgi phosphoprotein 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:78,157,724...78,215,933
Ensembl chr 5:83,536,242...83,596,639
JBrowse link
G HSPD1 heat shock protein family D (Hsp60) member 1 ISO RGD PMID:10806118 RGD:1625123 NCBI chr2B:84,729,615...84,743,352
Ensembl chr2B:202,623,497...202,636,959
JBrowse link
G PLD1 phospholipase D1 ISO RGD PMID:12429836 RGD:2299914 NCBI chr 3:168,606,342...168,816,383
Ensembl chr 3:176,790,753...176,961,033
JBrowse link
G RAB30 RAB30, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr11:78,040,163...78,136,785
Ensembl chr11:81,659,732...81,711,750
JBrowse link
G RAB34 RAB34, member RAS oncogene family located_in ISO (PMID:17881736) UniProt PMID:17881736 NCBI chr17:28,057,077...28,061,234
Ensembl chr17:28,562,118...28,566,242
JBrowse link
G SORL1 sortilin related receptor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:116,297,014...116,477,399
Ensembl chr11:120,222,491...120,402,432
JBrowse link
G STX16 syntaxin 16 located_in IEA Ensembl GO_REF:0000107 NCBI chr20:54,999,514...55,027,787
Ensembl chr20:56,271,484...56,299,929
JBrowse link
Golgi cis cisterna term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATL1 atlastin GTPase 1 located_in ISO PMID:14506257 UniProt PMID:14506257 RGD:1359760 NCBI chr14:31,122,551...31,222,537
Ensembl chr14:49,476,733...49,524,392
JBrowse link
G BET1 Bet1 golgi vesicular membrane trafficking protein ISO MMO:0000663 RGD PMID:14742712 RGD:14394613 NCBI chr 7:85,947,997...85,959,151
Ensembl chr 7:99,539,001...99,550,125
JBrowse link
G GOLGA2 golgin A2 located_in
part_of
ISO
IEA
(PMID:17488291) RGD
Ensembl
CACAO
PMID:8557739 PMID:17488291 GO_REF:0000107 RGD:632909 NCBI chr 9:99,376,847...99,397,128
Ensembl chr 9:128,047,056...128,065,137
JBrowse link
G GOLGA5 golgin A5 ISO RGD PMID:12656988 RGD:1599261 NCBI chr14:73,430,700...73,475,979
Ensembl chr14:92,770,342...92,815,444
JBrowse link
G GOLT1A golgi transport 1A located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:179,800,580...179,816,530
Ensembl chr 1:184,088,931...184,104,815
JBrowse link
G LLGL1 LLGL scribble cell polarity complex component 1 located_in ISO PMID:21856246 UniProt PMID:21856246 RGD:8553614 NCBI chr17:32,770,511...32,789,756
Ensembl chr17:37,966,100...37,985,103
JBrowse link
G LYZ lysozyme ISO RGD PMID:9208328 RGD:1599861 NCBI chr12:66,870,373...66,876,250
Ensembl chr12:69,646,794...69,652,677
JBrowse link
G NECAB3 N-terminal EF-hand calcium binding protein 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr20:29,944,457...29,962,566
Ensembl chr20:31,085,500...31,100,871
JBrowse link
G SMPD3 sphingomyelin phosphodiesterase 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr16:48,734,664...48,825,241
Ensembl chr16:68,131,905...68,142,871
JBrowse link
G TMEM59 transmembrane protein 59 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:53,305,154...53,326,975
Ensembl chr 1:54,899,026...54,920,478
JBrowse link
G XYLT1 xylosyltransferase 1 located_in ISO (MGI:5544658|PMID:24161523) UniProt PMID:24161523 MGI:5544658 NCBI chr16:20,078,904...20,447,268
Ensembl chr16:17,222,447...17,470,818
JBrowse link
Golgi cis cisterna membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC30A5 solute carrier family 30 member 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:44,873,631...44,909,875
Ensembl chr 5:46,440,860...46,477,050
JBrowse link
G SLC30A7 solute carrier family 30 member 7 located_in ISO (PMID:15525635) UniProt PMID:15525635 NCBI chr 1:103,552,661...103,636,019 JBrowse link
Golgi cisterna membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2C1 ATPase secretory pathway Ca2+ transporting 1 located_in IEA UniProt GO_REF:0000044 NCBI chr 3:127,937,272...128,101,060
Ensembl chr 3:135,260,796...135,423,700
JBrowse link
G B4GALNT3 beta-1,4-N-acetyl-galactosaminyltransferase 3 located_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000044 NCBI chr12:522,973...635,373
Ensembl chr12:561,726...598,827
JBrowse link
G B4GALNT4 beta-1,4-N-acetyl-galactosaminyltransferase 4 located_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000044 NCBI chr11:369,563...381,909 JBrowse link
G B4GALT1 beta-1,4-galactosyltransferase 1 located_in IEA UniProt GO_REF:0000104 NCBI chr 9:32,889,124...32,945,759
Ensembl chr 9:33,691,733...33,754,192
JBrowse link
G B4GALT2 beta-1,4-galactosyltransferase 2 located_in IEA UniProt GO_REF:0000104 NCBI chr 1:43,281,011...43,292,992
Ensembl chr 1:44,652,906...44,664,401
JBrowse link
G B4GALT3 beta-1,4-galactosyltransferase 3 located_in IEA UniProt GO_REF:0000104 NCBI chr 1:136,583,783...136,590,416
Ensembl chr 1:140,496,597...140,503,214
JBrowse link
G B4GALT4 beta-1,4-galactosyltransferase 4 located_in IEA UniProt GO_REF:0000104 NCBI chr 3:116,329,595...116,358,779
Ensembl chr 3:123,241,676...123,270,806
JBrowse link
G B4GALT5 beta-1,4-galactosyltransferase 5 located_in IEA UniProt GO_REF:0000104 NCBI chr20:45,977,801...46,058,429
Ensembl chr20:47,041,469...47,123,214
JBrowse link
G B4GALT6 beta-1,4-galactosyltransferase 6 located_in IEA UniProt GO_REF:0000104 NCBI chr18:24,840,106...24,906,309
Ensembl chr18:28,438,302...28,500,946
JBrowse link
G B4GALT7 beta-1,4-galactosyltransferase 7 located_in IEA UniProt GO_REF:0000104 NCBI chr 5:172,905,749...172,915,970
Ensembl chr 5:179,965,928...179,976,158
JBrowse link
G CHPF chondroitin polymerizing factor located_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000044 NCBI chr2B:106,796,215...106,801,081
Ensembl chr2B:225,386,262...225,390,886
JBrowse link
G CHPF2 chondroitin polymerizing factor 2 located_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000044 NCBI chr 7:142,818,243...142,825,718
Ensembl chr 7:154,971,194...154,977,557
JBrowse link
G CHSY1 chondroitin sulfate synthase 1 located_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000044 NCBI chr15:79,901,340...79,976,067
Ensembl chr15:99,186,705...99,260,591
JBrowse link
G CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 located_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000044 NCBI chr 8:18,626,998...18,980,416
Ensembl chr 8:15,576,416...15,904,123
JBrowse link
G CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 located_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000044 NCBI chr10:40,111,714...40,159,683
Ensembl chr10:43,311,054...43,342,855
JBrowse link
G FUT1 fucosyltransferase 1 (H blood group) located_in IEA UniProt GO_REF:0000044 NCBI chr19:45,747,261...45,753,436
Ensembl chr19:54,340,782...54,341,882
JBrowse link
G FUT10 fucosyltransferase 10 located_in IEA UniProt GO_REF:0000044 GO_REF:0000104 NCBI chr 8:32,685,110...32,788,502
Ensembl chr 8:29,872,097...29,974,524
JBrowse link
G FUT11 fucosyltransferase 11 located_in IEA UniProt GO_REF:0000044 GO_REF:0000104 NCBI chr10:70,295,122...70,301,897
Ensembl chr10:72,968,025...72,972,030
JBrowse link
G FUT3 fucosyltransferase 3 (Lewis blood group) located_in IEA UniProt GO_REF:0000044 NCBI chr19:4,860,818...4,873,481
Ensembl chr19:5,793,527...5,794,645
JBrowse link
G FUT4 fucosyltransferase 4 located_in IEA UniProt GO_REF:0000044 NCBI chr11:89,550,637...89,566,111
Ensembl chr11:93,036,119...93,037,711
JBrowse link
G FUT6 fucosyltransferase 6 located_in IEA UniProt GO_REF:0000044 NCBI chr19:4,846,423...4,857,328
Ensembl chr19:5,779,200...5,780,389
JBrowse link
G FUT7 fucosyltransferase 7 located_in IEA UniProt GO_REF:0000044 NCBI chr 9:108,090,793...108,093,513
Ensembl chr 9:137,058,831...137,061,607
JBrowse link
G FUT8 fucosyltransferase 8 located_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000044 NCBI chr14:45,983,149...46,310,318
Ensembl chr14:65,016,869...65,193,111
JBrowse link
G FUT9 fucosyltransferase 9 located_in IEA UniProt GO_REF:0000044 NCBI chr 6:93,857,269...94,048,555
Ensembl chr 6:97,932,631...97,933,710
JBrowse link
G GOLGA2 golgin A2 located_in ISO PMID:10769027
PMID:9150144
UniProt PMID:9150144 PMID:10769027 RGD:10400876 RGD:632910 NCBI chr 9:99,376,847...99,397,128
Ensembl chr 9:128,047,056...128,065,137
JBrowse link
G GOLPH3 golgi phosphoprotein 3 located_in IEA UniProt GO_REF:0000044 NCBI chr 5:78,157,724...78,215,933
Ensembl chr 5:83,536,242...83,596,639
JBrowse link
G GOLPH3L golgi phosphoprotein 3 like located_in IEA UniProt GO_REF:0000044 NCBI chr 1:126,002,787...126,053,672
Ensembl chr 1:129,652,118...129,703,379
JBrowse link
G GPR89A G protein-coupled receptor 89A located_in ISO (PMID:18794847) UniProt PMID:18794847 NCBI chr 1:122,092,157...122,154,820 JBrowse link
G LOC100976022 B cell receptor associated protein 31 ISO RGD PMID:11042173 RGD:1559139 Ensembl chr  X:153,137,992...153,161,628 JBrowse link
G LOC100991035 galactoside 2-alpha-L-fucosyltransferase 2 located_in IEA UniProt GO_REF:0000044 NCBI chr19:45,695,298...45,705,718
Ensembl chr19:54,294,501...54,295,532
JBrowse link
G NUCB1 nucleobindin 1 ISO RGD PMID:9647645 RGD:9831131 NCBI chr19:45,900,098...45,923,056
Ensembl chr19:54,832,426...54,855,962
JBrowse link
G PSENEN presenilin enhancer, gamma-secretase subunit located_in IEA UniProt GO_REF:0000044 NCBI chr19:32,675,331...32,677,285
Ensembl chr19:41,409,662...41,411,089
JBrowse link
G RAB21 RAB21, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr12:69,278,191...69,309,143
Ensembl chr12:72,137,432...72,171,844
JBrowse link
G ST6GAL2 ST6 beta-galactoside alpha-2,6-sialyltransferase 2 located_in IEA UniProt GO_REF:0000044 NCBI chr2A:92,857,170...92,944,262
Ensembl chr2A:107,964,544...108,044,068
JBrowse link
G TMEM115 transmembrane protein 115 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:50,280,876...50,285,900
Ensembl chr 3:51,516,157...51,520,976
JBrowse link
G TMEM87A transmembrane protein 87A located_in IEA Ensembl GO_REF:0000107 NCBI chr15:21,164,958...21,227,644
Ensembl chr15:39,325,412...39,386,297
JBrowse link
G UXS1 UDP-glucuronate decarboxylase 1 located_in IEA UniProt GO_REF:0000044 NCBI chr2A:95,652,107...95,770,022
Ensembl chr2A:107,168,309...107,234,632
JBrowse link
Golgi medial cisterna term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3GALT6 beta-1,3-galactosyltransferase 6 located_in ISO (PMID:11551958)
(MGI:2152770|PMID:11551958)
UniProt
MGI
PMID:11551958 MGI:2152770
G GLG1 golgi glycoprotein 1 ISO RGD PMID:7768993 RGD:68884 NCBI chr16:55,014,892...55,172,877
Ensembl chr16:74,372,660...74,526,764
JBrowse link
G GOLGA5 golgin A5 ISO RGD PMID:12656988 RGD:1599261 NCBI chr14:73,430,700...73,475,979
Ensembl chr14:92,770,342...92,815,444
JBrowse link
G GORASP2 golgi reassembly stacking protein 2 ISO RGD PMID:10487747 RGD:632865 NCBI chr2B:58,212,365...58,251,005
Ensembl chr2B:175,670,404...175,708,525
JBrowse link
G HID1 HID1 domain containing located_in IEA Ensembl GO_REF:0000107 NCBI chr17:68,896,323...68,918,315
Ensembl chr17:74,452,589...74,473,805
JBrowse link
G MAN2A1 mannosidase alpha class 2A member 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:105,034,104...105,219,011
Ensembl chr 5:110,841,349...111,025,187
JBrowse link
G NUCB2 nucleobindin 2 ISO RGD PMID:11893086 RGD:633331 NCBI chr11:17,331,742...17,404,682
Ensembl chr11:17,036,038...17,072,447
JBrowse link
G PCSK5 proprotein convertase subtilisin/kexin type 5 ISO RGD PMID:10906713 RGD:11556238 NCBI chr 9:48,480,607...48,943,331
Ensembl chr 9:74,745,761...75,220,502
JBrowse link
G SLC10A7 solute carrier family 10 member 7 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:138,592,266...138,857,833
Ensembl chr 4:150,251,966...150,510,812
JBrowse link
G ST6GAL1 ST6 beta-galactoside alpha-2,6-sialyltransferase 1 ISO RGD PMID:12626411 RGD:10043130 NCBI chr 3:183,955,462...184,104,537
Ensembl chr 3:192,488,087...192,569,970
JBrowse link
G TMEM59 transmembrane protein 59 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:53,305,154...53,326,975
Ensembl chr 1:54,899,026...54,920,478
JBrowse link
G YIPF1 Yip1 domain family member 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:53,125,832...53,163,694
Ensembl chr 1:54,720,334...54,758,382
JBrowse link
G YIPF2 Yip1 domain family member 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr19:10,475,806...10,482,352
Ensembl chr19:11,195,562...11,203,248
JBrowse link
G YIPF6 Yip1 domain family member 6 located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:57,738,236...57,815,002
Ensembl chr  X:67,803,940...67,839,711
JBrowse link
Golgi medial cisterna membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:130,111,085...130,227,195
Ensembl chr 8:133,084,835...133,119,791
JBrowse link
Golgi trans cisterna term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALT1 beta-1,4-galactosyltransferase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:32,889,124...32,945,759
Ensembl chr 9:33,691,733...33,754,192
JBrowse link
G GOLGA5 golgin A5 ISO RGD PMID:12656988 RGD:1599261 NCBI chr14:73,430,700...73,475,979
Ensembl chr14:92,770,342...92,815,444
JBrowse link
G HID1 HID1 domain containing located_in IEA Ensembl GO_REF:0000107 NCBI chr17:68,896,323...68,918,315
Ensembl chr17:74,452,589...74,473,805
JBrowse link
G SGMS1 sphingomyelin synthase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:46,960,159...47,273,353
Ensembl chr10:49,076,984...49,116,154
JBrowse link
G ST6GAL1 ST6 beta-galactoside alpha-2,6-sialyltransferase 1 ISO RGD PMID:12626411 RGD:10043130 NCBI chr 3:183,955,462...184,104,537
Ensembl chr 3:192,488,087...192,569,970
JBrowse link
G TMEM59 transmembrane protein 59 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:53,305,154...53,326,975
Ensembl chr 1:54,899,026...54,920,478
JBrowse link
G YIPF1 Yip1 domain family member 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:53,125,832...53,163,694
Ensembl chr 1:54,720,334...54,758,382
JBrowse link
G YIPF2 Yip1 domain family member 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr19:10,475,806...10,482,352
Ensembl chr19:11,195,562...11,203,248
JBrowse link
G YIPF6 Yip1 domain family member 6 located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:57,738,236...57,815,002
Ensembl chr  X:67,803,940...67,839,711
JBrowse link
Golgi trans cisterna membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:130,111,085...130,227,195
Ensembl chr 8:133,084,835...133,119,791
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 15634
    cellular anatomical entity 15385
      organelle subcompartment 935
        Golgi apparatus subcompartment 276
          Golgi cisterna 74
            Golgi cis cisterna + 13
            Golgi cisterna membrane + 40
            Golgi medial cisterna + 15
            Golgi trans cisterna + 10
Path 2
Term Annotations click to browse term
  cellular_component 15634
    cellular anatomical entity 15385
      intracellular anatomical structure 12120
        intracellular organelle 10810
          intracellular membrane-bounded organelle 9732
            Golgi apparatus 1296
              Golgi apparatus subcompartment 276
                Golgi stack 100
                  Golgi cisterna 74
                    Golgi cis cisterna + 13
                    Golgi cisterna membrane + 40
                    Golgi medial cisterna + 15
                    Golgi trans cisterna + 10
paths to the root