Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:filamentous actin
go back to main search page
Accession:GO:0031941 term browser browse the term
Definition:A two-stranded helical polymer of the protein actin.
Comment:Note that this term refers only to the actin portion of a microfilament, and does not encompass associated proteins. See also the cellular component term 'actin filament ; GO:0005884'.
Synonyms:exact_synonym: F-actin
 xref: Wikipedia:Actin


show annotations for term's descendants           Sort by:
 
filamentous actin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actg1 actin, gamma 1 part_of ISO (MGI:3821785|PMID:18796539) RGD PMID:18796539 MGI:3821785 NCBI chr10:105,619,738...105,622,587
Ensembl chr10:105,619,737...105,624,232
JBrowse link
G Apc2 APC regulator of WNT signaling pathway 2 colocalizes_with ISO (PMID:25753423) RGD PMID:25753423 NCBI chr 7:9,392,336...9,414,364
Ensembl chr 7:9,392,336...9,414,310
JBrowse link
G Arpc2 actin related protein 2/3 complex, subunit 2 IDA RGD PMID:10797548 RGD:11049163 NCBI chr 9:75,820,782...75,851,471
Ensembl chr 9:75,820,770...75,851,471
JBrowse link
G Arpc3 actin related protein 2/3 complex, subunit 3 IDA RGD PMID:10797548 RGD:11049163 NCBI chr12:34,172,780...34,186,651
Ensembl chr12:34,172,780...34,186,651
JBrowse link
G Carmil1 capping protein regulator and myosin 1 linker 1 part_of ISO (MGI:3588909|PMID:16054028) RGD PMID:16054028 MGI:3588909 NCBI chr17:40,807,921...41,088,326
Ensembl chr17:40,808,389...41,088,326
JBrowse link
G Cd2ap CD2-associated protein part_of ISO (PMID:10339567) RGD PMID:10339567 NCBI chr 9:18,086,744...18,182,744
Ensembl chr 9:18,086,984...18,182,199
JBrowse link
G Dpysl3 dihydropyrimidinase-like 3 part_of IDA PMID:16181627 UniProt PMID:16181627 RGD:8553533 NCBI chr18:35,374,429...35,480,462
Ensembl chr18:35,377,181...35,480,157
JBrowse link
G Dusp22 dual specificity phosphatase 22 part_of ISO (PMID:20018849) RGD PMID:20018849 NCBI chr17:33,780,980...33,831,540
Ensembl chr17:33,780,981...33,831,321
JBrowse link
G Ehbp1 EH domain binding protein 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:96,093,327...96,380,502
Ensembl chr14:96,093,327...96,345,332
JBrowse link
G Ehbp1l1 EH domain binding protein 1-like 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:202,994,115...203,014,320
Ensembl chr 1:202,994,118...203,014,270
JBrowse link
G Espn espin part_of IDA PMID:8799813 UniProt PMID:8799813 RGD:632658 NCBI chr 5:162,626,560...162,660,439
Ensembl chr 5:162,626,560...162,660,256
JBrowse link
G Jam3 junctional adhesion molecule 3 part_of ISO (PMID:19060272) RGD PMID:19060272 NCBI chr 8:25,508,461...25,569,306
Ensembl chr 8:25,507,057...25,569,355
JBrowse link
G Kptn kaptin (actin binding protein) colocalizes_with
part_of
ISO
IEA
(PMID:24239382)
GO_REF:0000107
RGD
Ensembl
PMID:24239382 GO_REF:0000107 NCBI chr 1:76,808,737...76,809,531 JBrowse link
G Ldb3 LIM domain binding 3 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:9,855,768...9,920,108
Ensembl chr16:9,855,927...9,918,532
JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 part_of ISO (MGI:5608927|PMID:25224220) RGD PMID:25224220 MGI:5608927 NCBI chr 2:43,348,572...43,414,706
Ensembl chr 2:43,350,098...43,414,463
JBrowse link
G Mical2 microtubule associated monooxygenase, calponin and LIM domain containing 2 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:166,345,853...166,471,715
NCBI chr 1:166,491,721...166,530,575
Ensembl chr 1:166,345,859...166,471,719
JBrowse link
G Micalcl MICAL C-terminal like part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:166,491,721...166,530,575
Ensembl chr 1:166,481,790...166,530,574
JBrowse link
G Myo18b myosin XVIIIb part_of ISO (MGI:3821523|PMID:18761673) RGD PMID:18761673 MGI:3821523 NCBI chr12:43,747,003...43,953,694
Ensembl chr12:43,747,010...43,953,695
JBrowse link
G Myo1a myosin IA part_of ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:9858156)
UniProt
Ensembl
RGD
PMID:9858156 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:63,542,988...63,557,944
Ensembl chr 7:63,542,988...63,557,944
JBrowse link
G Myo1c myosin 1C part_of ISO (PMID:9858156) RGD PMID:9858156 NCBI chr10:60,498,374...60,520,752
Ensembl chr10:60,498,280...60,520,752
JBrowse link
G Myo1f myosin IF part_of ISO (MGI:3664353|PMID:17023661) RGD PMID:17023661 MGI:3664353 NCBI chr 7:14,363,340...14,413,911
Ensembl chr 7:14,363,350...14,413,911
JBrowse link
G Myo3a myosin IIIA part_of ISO (PMID:12672820) RGD PMID:12672820 NCBI chr17:84,554,785...84,604,748
Ensembl chr17:84,543,552...84,759,042
JBrowse link
G Myo6 myosin VI part_of ISO (PMID:9852149)
(PMID:10519557)
RGD PMID:9852149 PMID:10519557 NCBI chr 8:81,087,157...81,242,022
Ensembl chr 8:81,087,139...81,239,292
JBrowse link
G Nckap1 NCK-associated protein 1 part_of ISO (MGI:5897521|PMID:27927633) RGD PMID:27927633 MGI:5897521 NCBI chr 3:65,417,450...65,491,769
Ensembl chr 3:65,417,453...65,492,217
JBrowse link
G Pdlim1 PDZ and LIM domain 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:239,042,372...239,091,074
Ensembl chr 1:239,042,385...239,091,076
JBrowse link
G Pdlim2 PDZ and LIM domain 2 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:45,235,421...45,250,187
Ensembl chr15:45,237,477...45,249,242
JBrowse link
G Pdlim3 PDZ and LIM domain 3 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:46,352,460...46,383,680
Ensembl chr16:46,352,467...46,383,657
JBrowse link
G Pdlim4 PDZ and LIM domain 4 part_of ISO
IBA
IEA
(PMID:10826496)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:10826496 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr10:38,198,686...38,212,935
Ensembl chr10:38,198,689...38,212,938
JBrowse link
G Pdlim5 PDZ and LIM domain 5 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:230,952,251...231,120,329
Ensembl chr 2:230,952,248...231,120,275
JBrowse link
G Pdlim7 PDZ and LIM domain 7 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:9,124,565...9,139,814
Ensembl chr17:9,124,649...9,139,811
JBrowse link
G Prickle4 prickle planar cell polarity protein 4 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:13,297,494...13,305,635
Ensembl chr 9:13,297,758...13,305,630
JBrowse link
G Rac3 Rac family small GTPase 3 part_of ISO (PMID:16525025) RGD PMID:16525025 NCBI chr10:106,002,808...106,005,244 JBrowse link
G Smtn smoothelin part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:78,398,595...78,420,908
Ensembl chr14:78,397,778...78,420,886
JBrowse link
G Smtnl1 smoothelin-like 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:69,889,010...69,901,096
Ensembl chr 3:69,889,010...69,901,079
JBrowse link
G Smtnl2 smoothelin-like 2 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:57,008,322...57,029,505
Ensembl chr10:57,008,327...57,029,505
JBrowse link
G Specc1 sperm antigen with calponin homology and coiled-coil domains 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:46,638,947...46,912,989
Ensembl chr10:46,638,809...46,912,802
JBrowse link
G Specc1l sperm antigen with calponin homology and coiled-coil domains 1-like part_of IBA
ISO
PMID:21873635
(MGI:5433266|PMID:21703590)
RGD PMID:21703590 PMID:21873635 MGI:5433266, RGD:13792537 NCBI chr20:13,337,983...13,443,665
Ensembl chr20:13,339,692...13,443,665
JBrowse link
G Tmsb15b2 thymosin beta 15B2 part_of ISO (MGI:3843053|PMID:19233202) RGD PMID:19233202 MGI:3843053 NCBI chr  X:100,298,705...100,300,820
Ensembl chr  X:100,298,514...100,300,886
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20010
    protein-containing complex 6011
      filamentous actin 38
Path 2
Term Annotations click to browse term
  cellular_component 20010
    cellular anatomical entity 19714
      organelle 13093
        non-membrane-bounded organelle 4903
          intracellular non-membrane-bounded organelle 4903
            cytoskeleton 2190
              actin cytoskeleton 509
                actin filament 132
                  filamentous actin 38
paths to the root