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ONTOLOGY REPORT - ANNOTATIONS


Term:endosome lumen
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Accession:GO:0031904 term browser browse the term
Definition:The volume enclosed by the membrane of an endosome.
Synonyms:xref: NIF_Subcellular:sao1547508851


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endosome lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd63 Cd63 molecule located_in IEA
ISO
GO_REF:0000107
(PMID:22660413)
Ensembl
RGD
PMID:22660413 GO_REF:0000107 NCBI chr 7:3,320,250...3,335,583
Ensembl chr 7:3,320,103...3,335,582
JBrowse link
G Lrp2 LDL receptor related protein 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:55,665,153...55,822,484
Ensembl chr 3:55,665,145...55,822,551
JBrowse link
G Lrpap1 LDL receptor related protein associated protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:80,911,281...80,923,290
Ensembl chr14:80,911,270...80,924,831
JBrowse link
G Ngf nerve growth factor located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:204,886,158...204,939,523
Ensembl chr 2:204,886,202...204,940,453
JBrowse link
G Prf1 perforin 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr20:30,915,294...30,920,804
Ensembl chr20:30,915,213...30,921,382
JBrowse link
early endosome lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdlim4 PDZ and LIM domain 4 located_in IDA PMID:15456832 UniProt PMID:15456832 RGD:13432260 NCBI chr10:39,390,578...39,405,322
Ensembl chr10:39,390,581...39,405,311
JBrowse link
G Rab32 RAB32, member RAS oncogene family NOT|located_in ISO (PMID:22511774) RGD PMID:22511774 NCBI chr 1:4,638,663...4,653,220
Ensembl chr 1:4,637,491...4,653,210
JBrowse link
G Rab38 RAB38, member RAS oncogene family NOT|located_in ISO (PMID:22511774) RGD PMID:22511774 NCBI chr 1:152,072,716...152,153,449
Ensembl chr 1:152,072,665...152,153,449
JBrowse link
recycling endosome lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdlim4 PDZ and LIM domain 4 located_in IDA PMID:15456832 UniProt PMID:15456832 RGD:13432260 NCBI chr10:39,390,578...39,405,322
Ensembl chr10:39,390,581...39,405,311
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20126
    cellular anatomical entity 19825
      endomembrane system 3985
        endosome 870
          endosome lumen 8
            early endosome lumen 3
            endolysosome lumen 0
            late endosome lumen + 0
            recycling endosome lumen 1
Path 2
Term Annotations click to browse term
  cellular_component 20126
    cellular anatomical entity 19825
      intracellular anatomical structure 14390
        intracellular organelle 12739
          intracellular membrane-bounded organelle 11187
            intracellular vesicle 1907
              cytoplasmic vesicle 1900
                endosome 870
                  endosome lumen 8
                    early endosome lumen 3
                    endolysosome lumen 0
                    late endosome lumen + 0
                    recycling endosome lumen 1
paths to the root