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ONTOLOGY REPORT - ANNOTATIONS


Term:early endosome membrane
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Accession:GO:0031901 term browser browse the term
Definition:The lipid bilayer surrounding an early endosome.


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early endosome membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca7 ATP binding cassette subfamily A member 7 JBrowse link 7 12,742,433 12,762,423 RGD:1600115
G Anxa1 annexin A1 JBrowse link 1 237,893,983 237,910,002 RGD:1600115
RGD:1624291
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 JBrowse link 7 26,256,179 26,306,128 RGD:1600115
G Arc activity-regulated cytoskeleton-associated protein JBrowse link 7 115,907,097 115,911,059 RGD:1600115
G Arf6 ADP-ribosylation factor 6 JBrowse link 6 91,697,109 91,698,257 RGD:1600115
G Baiap3 BAI1-associated protein 3 JBrowse link 10 14,601,133 14,613,881 RGD:1624291
G Bok BCL2 family apoptosis regulator BOK JBrowse link 9 100,829,593 100,840,498 RGD:1624291
RGD:1600115
G Cd274 CD274 molecule JBrowse link 1 247,519,890 247,539,659 RGD:1624291
G Cftr CF transmembrane conductance regulator JBrowse link 4 42,693,263 42,860,679 RGD:1600115
G Clcn3 chloride voltage-gated channel 3 JBrowse link 16 32,448,821 32,520,649 RGD:1600115
G Clcn4 chloride voltage-gated channel 4 JBrowse link X 25,016,177 25,082,563 RGD:1600115
G Clip3 CAP-GLY domain containing linker protein 3 JBrowse link 1 88,750,453 88,766,453 RGD:1624291
RGD:1600115
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin JBrowse link 1 197,986,384 197,999,726 RGD:1624291
G Clvs1 clavesin 1 JBrowse link 5 22,380,318 22,580,391 RGD:1600115
G Clvs2 clavesin 2 JBrowse link 1 25,173,089 25,217,625 RGD:1600115
G Cmtm6 CKLF-like MARVEL transmembrane domain containing 6 JBrowse link 8 122,789,208 122,807,560 RGD:1624291
G Dnajc13 DnaJ heat shock protein family (Hsp40) member C13 JBrowse link 8 112,697,907 112,830,445 RGD:1624291
G Egfr epidermal growth factor receptor JBrowse link 14 99,919,485 100,104,136 RGD:1624291
G Ehd1 EH-domain containing 1 JBrowse link 1 221,644,867 221,667,242 RGD:1624291
RGD:1600115
G Epha4 Eph receptor A4 JBrowse link 9 83,111,222 83,253,486 RGD:1624291
RGD:1600115
G Epha8 Eph receptor A8 JBrowse link 5 155,293,731 155,321,016 RGD:1600115
G Ephb1 Eph receptor B1 JBrowse link 8 110,376,954 110,813,193 RGD:1624291
RGD:1600115
G Gga3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 JBrowse link 10 104,137,655 104,156,576 RGD:1600115
G Gpnmb glycoprotein nmb JBrowse link 4 78,694,447 78,715,685 RGD:1600115
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 JBrowse link 10 42,441,723 42,760,200 RGD:13432260
G Hgs hepatocyte growth factor-regulated tyrosine kinase substrate JBrowse link 10 109,638,944 109,657,460 RGD:1600115
G Hps6 HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 JBrowse link 1 265,761,818 265,764,427 RGD:1600115
G Inpp4a inositol polyphosphate-4-phosphatase type I A JBrowse link 9 43,889,887 44,006,593 RGD:1600115
G Kcnh1 potassium voltage-gated channel subfamily H member 1 JBrowse link 13 110,920,712 111,232,291 RGD:1624291
RGD:1600115
G Lamp5 lysosomal-associated membrane protein family, member 5 JBrowse link 3 129,012,677 129,031,522 RGD:1624291
RGD:1600115
G Ldlrad4 low density lipoprotein receptor class A domain containing 4 JBrowse link 18 63,717,423 64,045,224 RGD:1624291
G Llgl1 LLGL scribble cell polarity complex component 1 JBrowse link 10 46,940,873 46,955,524 RGD:8553614
G LOC108348122 CAP-Gly domain-containing linker protein 3 JBrowse link 1 90,962,921 90,978,946 RGD:1600115
G Marchf1 membrane associated ring-CH-type finger 1 JBrowse link 16 24,998,709 25,856,327 RGD:1624291
RGD:13792537
G Marchf3 membrane associated ring-CH-type finger 3 JBrowse link 18 51,844,980 51,998,017 RGD:1600115
G Marchf8 membrane associated ring-CH-type finger 8 JBrowse link 4 148,285,467 148,398,148 RGD:13792537
G Mmgt1 membrane magnesium transporter 1 JBrowse link X 158,966,694 158,978,995 RGD:1600115
G Mmgt2 membrane magnesium transporter 2 JBrowse link 10 48,986,163 48,989,596 RGD:1600115
G Napepld N-acyl phosphatidylethanolamine phospholipase D JBrowse link 4 9,965,323 10,004,650 RGD:1600115
G Nsg1 neuronal vesicle trafficking associated 1 JBrowse link 14 77,380,264 77,402,007 RGD:9850097
G Nsg2 neuronal vesicle trafficking associated 2 JBrowse link 10 15,867,885 15,928,169 RGD:1600115
G Ntrk1 neurotrophic receptor tyrosine kinase 1 JBrowse link 2 187,143,568 187,160,373 RGD:1600115
G Ntrk2 neurotrophic receptor tyrosine kinase 2 JBrowse link 17 5,934,651 6,245,778 RGD:1600115
G Ocrl OCRL, inositol polyphosphate-5-phosphatase JBrowse link X 134,742,226 134,793,411 RGD:1600115
G Olr59 olfactory receptor 59 JBrowse link 1 167,906,030 167,940,688 RGD:1600115
RGD:1624291
G Osbpl6 oxysterol binding protein-like 6 JBrowse link 3 63,257,646 63,455,105 RGD:1600115
RGD:1624291
G Pdlim4 PDZ and LIM domain 4 JBrowse link 10 39,390,578 39,405,322 RGD:1600115
G Pi4k2a phosphatidylinositol 4-kinase type 2 alpha JBrowse link 1 261,337,594 261,362,509 RGD:2306408
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing JBrowse link 9 71,911,744 72,005,816 RGD:1624291
G Pld3 phospholipase D family, member 3 JBrowse link 1 84,339,269 84,361,686 RGD:1600115
RGD:1624291
G Pmepa1 prostate transmembrane protein, androgen induced 1 JBrowse link 3 171,295,630 171,342,662 RGD:1624291
G Psen1 presenilin 1 JBrowse link 6 107,169,514 107,221,000 RGD:1600115
G Rab14 RAB14, member RAS oncogene family JBrowse link 3 14,373,270 14,395,357 RGD:1600115
G Rab4a RAB4A, member RAS oncogene family JBrowse link 19 56,585,598 56,613,078 RGD:1600115
G Rac1 Rac family small GTPase 1 JBrowse link 12 13,090,316 13,111,841 RGD:1624291
G Rcc2 regulator of chromosome condensation 2 JBrowse link 5 159,220,531 159,236,313 RGD:1624291
G RGD1307443 similar to mKIAA0319 protein JBrowse link 17 42,163,245 42,226,725 RGD:1600115
G RT1-CE5 RT1 class I, locus CE5 JBrowse link 20 4,892,702 4,896,993 RGD:1624291
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 JBrowse link 9 11,031,847 11,055,285 RGD:1600115
G Sh3gl3 SH3 domain containing GRB2 like 3, endophilin A3 JBrowse link 1 144,069,641 144,200,402 RGD:1600115
G Slc1a1 solute carrier family 1 member 1 JBrowse link 1 246,955,017 247,035,159 RGD:1624291
G Slc9a6 solute carrier family 9 member A6 JBrowse link X 158,979,081 159,045,019 RGD:1624291
G Snx1 sorting nexin 1 JBrowse link 8 71,745,687 71,786,182 RGD:1624291
G Snx12 sorting nexin 12 JBrowse link X 70,989,822 71,127,330 RGD:13792537
G Snx16 sorting nexin 16 JBrowse link 2 93,518,796 93,541,056 RGD:1600115
G Snx19 sorting nexin 19 JBrowse link 8 31,497,034 31,534,077 RGD:1624291
G Snx20 sorting nexin 20 JBrowse link 19 19,395,655 19,404,846 RGD:1624291
RGD:1600115
G Snx21 sorting nexin family member 21 JBrowse link 3 161,252,634 161,261,880 RGD:1624291
G Snx27 sorting nexin 27 JBrowse link 2 195,738,613 195,821,608 RGD:1600115
G Snx3 sorting nexin 3 JBrowse link 20 47,225,382 47,263,390 RGD:1624291
RGD:13792537
G Snx4 sorting nexin 4 JBrowse link 11 70,693,381 70,753,620 RGD:1624291
G Snx5 sorting nexin 5 JBrowse link 3 138,378,032 138,397,944 RGD:1624291
RGD:1600115
G Snx6 sorting nexin 6 JBrowse link 6 75,626,927 75,670,172 RGD:1624291
G Snx8 sorting nexin 8 JBrowse link 12 16,340,917 16,389,500 RGD:1624291
G Sorcs2 sortilin-related VPS10 domain containing receptor 2 JBrowse link 14 79,538,911 79,912,333 RGD:1624291
G Sorl1 sortilin related receptor 1 JBrowse link 8 46,228,077 46,287,171 RGD:1600115
G Sphk1 sphingosine kinase 1 JBrowse link 10 105,498,728 105,504,401 RGD:1600115
RGD:1624291
G Stam2 signal transducing adaptor molecule 2 JBrowse link 3 38,230,676 38,277,433 RGD:1600115
G Steap4 STEAP4 metalloreductase JBrowse link 4 23,112,682 23,135,354 RGD:1600115
G Stx12 syntaxin 12 JBrowse link 5 151,044,050 151,072,893 RGD:1600115
G Stx7 syntaxin 7 JBrowse link 1 22,241,655 22,281,850 RGD:1600115
G Syndig1 synapse differentiation inducing 1 JBrowse link 3 145,031,427 145,199,273 RGD:1624291
RGD:1600115
G Tmem163 transmembrane protein 163 JBrowse link 13 44,166,306 44,345,735 RGD:8553679
G Tmem165 transmembrane protein 165 JBrowse link 14 34,503,037 34,528,262 RGD:1600115
G Tmem184a transmembrane protein 184A JBrowse link 12 16,906,863 16,924,143 RGD:1624291
RGD:13792537
RGD:1600115
G Tsg101 tumor susceptibility 101 JBrowse link 1 102,941,151 102,971,017 RGD:1600115
G Ubxn6 UBX domain protein 6 JBrowse link 9 10,995,516 11,000,643 RGD:1624291
G Vamp8 vesicle-associated membrane protein 8 JBrowse link 4 100,250,301 100,252,756 RGD:1600115
G Vps16 VPS16 core subunit of CORVET and HOPS complexes JBrowse link 3 122,947,887 122,969,543 RGD:1624291
G Vps33b VPS33B, late endosome and lysosome associated JBrowse link 1 142,060,955 142,083,955 RGD:1624291
G Vti1b vesicle transport through interaction with t-SNAREs 1B JBrowse link 6 102,340,261 102,353,612 RGD:1624291
RGD:1600115
G Washc1 WASH complex subunit 1 JBrowse link 9 113,918,914 113,936,861 RGD:1600115
G Washc2c WASH complex subunit 2C JBrowse link 4 148,139,512 148,197,363 RGD:1600115
G Wdr81 WD repeat domain 81 JBrowse link 10 62,273,817 62,287,213 RGD:1600115
RGD:1624291
G Wdr91 WD repeat domain 91 JBrowse link 4 62,398,073 62,438,958 RGD:1624291
RGD:1600115
G Wls Wnt ligand secretion mediator JBrowse link 2 266,315,036 266,431,220 RGD:1600115
G Zfyve16 zinc finger FYVE-type containing 16 JBrowse link 2 22,060,879 22,105,822 RGD:13792537
G Zfyve28 zinc finger FYVE-type containing 28 JBrowse link 14 81,725,513 81,811,142 RGD:1624291
RGD:13792537
G Zfyve9 zinc finger FYVE-type containing 9 JBrowse link 5 128,233,096 128,392,675 RGD:1624291
RGD:13792537
cytoplasmic side of early endosome membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Litaf lipopolysaccharide-induced TNF factor JBrowse link 10 4,753,546 4,763,272 RGD:1624291
RGD:1600115
G Rab21 RAB21, member RAS oncogene family JBrowse link 7 58,261,985 58,286,770 RGD:1624291
G Rab5a RAB5A, member RAS oncogene family JBrowse link 9 5,910 6,065 RGD:1624291
extrinsic component of postsynaptic early endosome membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gripap1 GRIP1 associated protein 1 JBrowse link X 15,523,929 15,553,702 RGD:12050105
RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19738
    cellular anatomical entity 19354
      endomembrane system 3837
        endosome 815
          endosome membrane 313
            early endosome membrane 103
              cytoplasmic side of early endosome membrane 3
              lumenal side of early endosome membrane 0
              postsynaptic early endosome membrane + 1
Path 2
Term Annotations click to browse term
  cellular_component 19738
    cellular anatomical entity 19354
      organelle 12457
        membrane-bounded organelle 10811
          vesicle 1961
            intracellular vesicle 1816
              cytoplasmic vesicle 1811
                endosome 815
                  endosome membrane 313
                    early endosome membrane 103
                      cytoplasmic side of early endosome membrane 3
                      lumenal side of early endosome membrane 0
                      postsynaptic early endosome membrane + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.