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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to nutrient
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Accession:GO:0031670 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus.


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cellular response to nutrient term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat2 acetyl-CoA acetyltransferase 2 ISO N-acetylcysteine RGD PMID:12563020 RGD:1598705 NCBI chrNW_004955439:21,123,886...21,142,562
Ensembl chrNW_004955439:21,122,923...21,142,480
JBrowse link
G Ccne1 cyclin E1 ISO RGD PMID:17979132 RGD:2289272 NCBI chrNW_004955468:7,803,610...7,814,872
Ensembl chrNW_004955468:7,803,346...7,814,872
JBrowse link
G Cdkn2b cyclin dependent kinase inhibitor 2B involved_in ISO (PMID:17597576) BHF-UCL PMID:17597576 NCBI chrNW_004955472:12,275,613...12,280,141
Ensembl chrNW_004955472:12,275,544...12,280,528
JBrowse link
G Dbi diazepam binding inhibitor, acyl-CoA binding protein ISO RGD PMID:15825833 RGD:2316268 NCBI chrNW_004955459:10,342,528...10,347,700
Ensembl chrNW_004955459:10,342,251...10,347,733
JBrowse link
G Hmox1 heme oxygenase 1 ISO RGD PMID:15531134 RGD:1582714 NCBI chrNW_004955405:43,124,447...43,128,873
Ensembl chrNW_004955405:43,124,510...43,130,979
JBrowse link
G Lpl lipoprotein lipase involved_in ISO (MGI:6282942|PMID:21986524) ARUK-UCL PMID:21986524 MGI:6282942 NCBI chrNW_004955403:43,646,084...43,672,116
Ensembl chrNW_004955403:43,646,084...43,673,967
JBrowse link
G Pdk2 pyruvate dehydrogenase kinase 2 involved_in ISO (MGI:5428826|PMID:22360721) UniProt PMID:22360721 MGI:5428826 NCBI chrNW_004955451:11,547,660...11,559,266
Ensembl chrNW_004955451:11,547,660...11,559,403
JBrowse link
G Prdm4 PR/SET domain 4 ISO fetal calf serum RGD PMID:10485890 RGD:633619 NCBI chrNW_004955405:41,335,019...41,354,625
Ensembl chrNW_004955405:41,336,199...41,353,261
JBrowse link
G Tnks tankyrase ISO RGD PMID:25876076 RGD:13628743 NCBI chrNW_004955463:5,589,194...5,770,141
Ensembl chrNW_004955463:5,588,423...5,764,581
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (MGI:4442277|PMID:20348926) UniProt PMID:20348926 MGI:4442277 NCBI chrNW_004955455:3,037,885...3,041,827 JBrowse link
cellular response to folic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Folr1 folate receptor alpha involved_in ISO (PMID:14722620) BHF-UCL PMID:14722620 NCBI chrNW_004955414:19,188,830...19,197,728
Ensembl chrNW_004955414:19,187,388...19,197,728
JBrowse link
cellular response to L-ascorbic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eln elastin ISO RGD PMID:2859894 RGD:9585689 NCBI chrNW_004955456:13,788,992...13,818,836 JBrowse link
G Lep leptin ISO RGD PMID:20400526 RGD:5128594 NCBI chrNW_004955479:9,266,604...9,276,568
Ensembl chrNW_004955479:9,274,516...9,279,472
JBrowse link
cellular response to menadione term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dcps decapping enzyme, scavenger involved_in ISO (PMID:16140270) UniProt PMID:16140270 NCBI chrNW_004955412:27,326,946...27,367,455
Ensembl chrNW_004955412:27,326,971...27,367,342
JBrowse link
G Ndor1 NADPH dependent diflavin oxidoreductase 1 involved_in ISO (PMID:16140270) UniProt PMID:16140270 NCBI chrNW_004955513:5,208,040...5,216,618
Ensembl chrNW_004955513:5,208,151...5,216,182
JBrowse link
cellular response to methionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:1201245 RGD:6893692 NCBI chrNW_004955492:3,372,915...3,474,173
Ensembl chrNW_004955492:3,376,512...3,474,180
JBrowse link
cellular response to vitamin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting helicase 1 ISO RGD PMID:16771696 RGD:2326085 NCBI chrNW_004955451:2,705,834...2,820,610
Ensembl chrNW_004955451:2,707,793...2,818,592
JBrowse link
cellular response to vitamin A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ltc4s leukotriene C4 synthase ISO RGD PMID:12767051 RGD:724432 NCBI chrNW_004955408:788,856...791,505 JBrowse link
cellular response to vitamin B1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mdm2 MDM2 proto-oncogene ISO RGD PMID:15656374 RGD:2317394 NCBI chrNW_004955458:15,264,028...15,287,290
Ensembl chrNW_004955458:15,263,739...15,286,808
JBrowse link
cellular response to vitamin B3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sirt1 sirtuin 1 ISO RGD PMID:23555824 RGD:10047117 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
JBrowse link
cellular response to vitamin D term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif 1 ISO RGD PMID:11108265 RGD:9681746 NCBI chrNW_004955407:26,524,487...26,533,038
Ensembl chrNW_004955407:26,524,130...26,533,038
JBrowse link
G Atp2b1 ATPase plasma membrane Ca2+ transporting 1 ISO RGD PMID:11277270 RGD:2317730 NCBI chrNW_004955405:26,872,379...26,932,270
Ensembl chrNW_004955405:26,872,379...26,932,703
JBrowse link
G Bglap bone gamma-carboxyglutamate protein ISO RGD PMID:3257212 PMID:6607920 RGD:2316174 RGD:6483560 NCBI chrNW_004955545:2,381,091...2,382,114
Ensembl chrNW_004955545:2,381,156...2,381,978
JBrowse link
G Casr calcium sensing receptor ISO 1,25-dihydroxycholecalciferol (calcitriol) RGD PMID:21940515 RGD:7205697 NCBI chrNW_004955427:21,486,608...21,574,017
Ensembl chrNW_004955427:21,486,427...21,575,210
JBrowse link
G Fes FES proto-oncogene, tyrosine kinase involved_in ISO (PMID:28389358) ARUK-UCL PMID:28389358 NCBI chrNW_004955416:14,948,121...14,959,035
Ensembl chrNW_004955416:14,948,123...14,960,005
JBrowse link
G Fgf23 fibroblast growth factor 23 ISO RGD PMID:23263654 RGD:10044209 NCBI chrNW_004955413:2,182,459...2,192,279
Ensembl chrNW_004955413:2,182,459...2,192,279
JBrowse link
G Fzd2 frizzled class receptor 2 ISO RGD PMID:1334084 RGD:61590 NCBI chrNW_004955451:17,501,410...17,503,726 JBrowse link
G Gdap1 ganglioside induced differentiation associated protein 1 ISO RGD PMID:25449168 RGD:12738378 NCBI chrNW_004955444:6,053,422...6,069,741
Ensembl chrNW_004955444:6,051,301...6,069,765
JBrowse link
G Il15 interleukin 15 ISO RGD PMID:15637289 RGD:2311387 NCBI chrNW_004955471:1,496,352...1,583,919
Ensembl chrNW_004955471:1,497,483...1,511,469
JBrowse link
G Itgb1 integrin subunit beta 1 ISO calcitriol RGD PMID:20304064 RGD:2325261 NCBI chrNW_004955462:4,454,809...4,483,227
Ensembl chrNW_004955462:4,454,809...4,484,842
JBrowse link
G Kdm6a lysine demethylase 6A ISO RGD PMID:31907922 RGD:151665135 NCBI chrNW_004955516:3,151,350...3,346,832
Ensembl chrNW_004955516:3,149,948...3,346,832
JBrowse link
G LOC102013768 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial ISO RGD PMID:28104492 RGD:151665513 NCBI chrNW_004955445:4,874,583...4,891,723
Ensembl chrNW_004955445:4,873,942...4,891,780
JBrowse link
G Ltbp1 latent transforming growth factor beta binding protein 1 ISO RGD PMID:10025676 RGD:10412059 NCBI chrNW_004955441:1,405,340...1,626,668
Ensembl chrNW_004955441:1,232,041...1,627,470
JBrowse link
G Nos2 nitric oxide synthase 2 ISO RGD PMID:18534083 RGD:4891908 NCBI chrNW_004955481:5,197,957...5,232,406
Ensembl chrNW_004955481:5,201,234...5,231,961
JBrowse link
G Pdia3 protein disulfide isomerase family A member 3 ISO RGD PMID:15862831 RGD:9999173 NCBI chrNW_004955416:10,197,957...10,221,104
Ensembl chrNW_004955416:10,198,099...10,220,792
JBrowse link
G Penk proenkephalin ISO RGD PMID:8584038 RGD:10003035 NCBI chrNW_004955454:15,425,712...15,426,685
Ensembl chrNW_004955454:15,426,017...15,426,685
JBrowse link
G Phex phosphate regulating endopeptidase X-linked ISO RGD PMID:15337762 RGD:11556251 NCBI chrNW_004955509:2,357,263...2,546,802
Ensembl chrNW_004955509:2,357,263...2,546,802
JBrowse link
G Ptn pleiotrophin ISO RGD PMID:21153232 RGD:9831436 NCBI chrNW_004955494:5,580,264...5,681,848
Ensembl chrNW_004955494:5,580,422...5,684,190
JBrowse link
G Sfrp1 secreted frizzled related protein 1 involved_in ISO (PMID:16149051) UniProt PMID:16149051 NCBI chrNW_004955536:1,663,721...1,702,678
Ensembl chrNW_004955536:1,663,344...1,703,514
JBrowse link
G Tnc tenascin C ISO RGD PMID:10502285 RGD:4889620 NCBI chrNW_004955419:12,569,620...12,662,897
Ensembl chrNW_004955419:12,569,547...12,662,958
JBrowse link
G Vdr vitamin D receptor ISO RGD PMID:9753201 RGD:8158092 NCBI chrNW_004955500:6,745,725...6,798,052
Ensembl chrNW_004955500:6,745,678...6,798,048
JBrowse link
cellular response to vitamin E term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col1a1 collagen type I alpha 1 chain ISO RGD PMID:23722449 RGD:8552711 NCBI chrNW_004955451:11,468,156...11,484,410
Ensembl chrNW_004955451:11,468,290...11,483,073
JBrowse link
G Col2a1 collagen type II alpha 1 chain ISO RGD PMID:23722449 RGD:8552711 NCBI chrNW_004955500:6,860,771...6,885,466
Ensembl chrNW_004955500:6,860,771...6,885,473
JBrowse link
G Pawr pro-apoptotic WT1 regulator ISO RGD PMID:10428045 RGD:9835341 NCBI chrNW_004955405:18,434,711...18,540,710
Ensembl chrNW_004955405:18,434,711...18,540,710
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma ISO RGD PMID:11752099 RGD:8553036 NCBI chrNW_004955429:14,814,690...14,936,869
Ensembl chrNW_004955429:14,873,908...14,937,387
JBrowse link
cellular response to vitamin K term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl5 C-C motif chemokine ligand 5 ISO menadione (K3) RGD PMID:19291322 RGD:4889997 NCBI chrNW_004955481:10,293,758...10,301,118
Ensembl chrNW_004955481:10,293,399...10,301,143
JBrowse link
G Gas6 growth arrest specific 6 involved_in ISO (PMID:16359517) UniProt PMID:16359517 NCBI chrNW_004955404:276,397...303,864
Ensembl chrNW_004955404:275,946...304,809
JBrowse link
G Postn periostin involved_in ISO (PMID:18450759)
(MGI:3804342|PMID:18450759)
UniProt PMID:18450759 MGI:3804342 NCBI chrNW_004955431:8,510,646...8,544,901
Ensembl chrNW_004955431:8,510,624...8,544,971
JBrowse link
negative regulation of transcription from RNA polymerase II promoter by glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 involved_in ISO (MGI:5142372|PMID:11875061) BHF-UCL PMID:11875061 MGI:5142372 NCBI chrNW_004955415:29,982,940...29,987,093
Ensembl chrNW_004955415:29,982,940...29,986,255
JBrowse link
G Sik2 salt inducible kinase 2 involved_in ISO (MGI:5000207|PMID:21084751) MGI PMID:21084751 MGI:5000207 NCBI chrNW_004955412:13,342,032...13,458,076
Ensembl chrNW_004955412:13,342,032...13,457,563
JBrowse link
negative regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kank2 KN motif and ankyrin repeat domains 2 involved_in ISO (PMID:24671081) UniProt PMID:24671081 NCBI chrNW_004955495:2,168,992...2,173,581 JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:19502595) BHF-UCL PMID:19502595 NCBI chrNW_004955454:8,759,860...8,763,603
Ensembl chrNW_004955454:8,758,636...8,764,427
JBrowse link
positive regulation of transcription by glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srf serum response factor ISO RGD PMID:20655308 RGD:5131625 NCBI chrNW_004955437:9,100,546...9,109,305
Ensembl chrNW_004955437:9,098,968...9,107,057
JBrowse link
positive regulation of transcription from RNA polymerase II promoter by galactose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncoa1 nuclear receptor coactivator 1 involved_in ISO (PMID:10207113) UniProt PMID:10207113 NCBI chrNW_004955469:6,676,780...6,892,587
Ensembl chrNW_004955469:6,794,821...6,892,566
JBrowse link
positive regulation of transcription from RNA polymerase II promoter by glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 involved_in ISO (MGI:5142372|PMID:11875061) BHF-UCL PMID:11875061 MGI:5142372 NCBI chrNW_004955415:29,982,940...29,987,093
Ensembl chrNW_004955415:29,982,940...29,986,255
JBrowse link
G Kat2b lysine acetyltransferase 2B involved_in ISO (MGI:5000207|PMID:21084751) MGI PMID:21084751 MGI:5000207 NCBI chrNW_004955430:12,109,493...12,196,102
Ensembl chrNW_004955430:12,128,069...12,198,117
JBrowse link
G Mlx MAX dimerization protein MLX involved_in ISO (MGI:3040568|PMID:14742444) MGI PMID:14742444 MGI:3040568 NCBI chrNW_004955451:16,460,737...16,464,529
Ensembl chrNW_004955451:16,459,879...16,464,529
JBrowse link
G Mlxipl MLX interacting protein like involved_in ISO (MGI:3057069|PMID:15496471)
(MGI:3040568|PMID:14742444)
(MGI:5000150|PMID:21471514)
MGI PMID:14742444 PMID:15496471 PMID:21471514 MGI:3040568 MGI:3057069 MGI:5000150 NCBI chrNW_004955456:14,096,530...14,116,687
Ensembl chrNW_004955456:14,096,531...14,117,269
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in ISO (MGI:5000150|PMID:21471514) MGI PMID:21471514 MGI:5000150 NCBI chrNW_004955475:11,062,258...11,112,252
Ensembl chrNW_004955475:11,062,076...11,114,169
JBrowse link
G Usf1 upstream transcription factor 1 involved_in ISO (PMID:7852331)
(MGI:1330677|PMID:9890958)
BHF-UCL PMID:7852331 PMID:9890958 MGI:1330677 NCBI chrNW_004955468:12,814,810...12,821,383
Ensembl chrNW_004955468:12,814,810...12,821,383
JBrowse link
G Usf2 upstream transcription factor 2, c-fos interacting involved_in ISO (PMID:7852331)
(MGI:1330677|PMID:9890958)
BHF-UCL PMID:7852331 PMID:9890958 MGI:1330677 NCBI chrNW_004955468:4,565,089...4,574,294
Ensembl chrNW_004955468:4,565,025...4,574,619
JBrowse link
positive regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102011841 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial involved_in ISO (PMID:16549446) BHF-UCL PMID:16549446 NCBI chrNW_004955458:5,472,404...5,477,001
Ensembl chrNW_004955458:5,472,404...5,477,001
JBrowse link
G Mn1 MN1 proto-oncogene, transcriptional regulator involved_in ISO (PMID:15890672) UniProt PMID:15890672 NCBI chrNW_004955455:2,130,104...2,171,868
Ensembl chrNW_004955455:2,127,377...2,171,850
JBrowse link
G Rxra retinoid X receptor alpha involved_in ISO (PMID:20171278) ComplexPortal PMID:20171278 NCBI chrNW_004955513:3,313,544...3,386,544
Ensembl chrNW_004955513:3,335,897...3,386,994
JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:11514567), (PMID:9632709) UniProt PMID:9632709 PMID:11514567 NCBI chrNW_004955438:1,561,562...1,601,492
Ensembl chrNW_004955438:1,561,568...1,601,492
JBrowse link
G Vdr vitamin D receptor involved_in ISO (PMID:20171278) ComplexPortal PMID:20171278 NCBI chrNW_004955500:6,745,725...6,798,052
Ensembl chrNW_004955500:6,745,678...6,798,048
JBrowse link
regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO (MGI:3655015|PMID:16324150) MGI PMID:16324150 MGI:3655015 NCBI chrNW_004955451:14,204,326...14,237,809
Ensembl chrNW_004955451:14,202,744...14,237,797
JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:14985122) UniProt PMID:14985122 NCBI chrNW_004955438:1,561,562...1,601,492
Ensembl chrNW_004955438:1,561,568...1,601,492
JBrowse link
G Trim24 tripartite motif containing 24 acts_upstream_of_or_within ISO (MGI:3776949|PMID:18287084) MGI PMID:18287084 MGI:3776949 NCBI chrNW_004955494:4,308,924...4,421,588
Ensembl chrNW_004955494:4,308,924...4,370,160
JBrowse link
vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pim1 Pim-1 proto-oncogene, serine/threonine kinase involved_in ISO (PMID:22720752) CACAO PMID:22720752 NCBI chrNW_004955437:5,940,825...5,945,367
Ensembl chrNW_004955437:5,942,106...5,945,431
JBrowse link
G Vdr vitamin D receptor involved_in ISO (PMID:16549446)
(PMID:28698609)
BHF-UCL
UniProt
PMID:16549446 PMID:28698609 NCBI chrNW_004955500:6,745,725...6,798,052
Ensembl chrNW_004955500:6,745,678...6,798,048
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12288
    response to stimulus 6664
      cellular response to stimulus 5325
        cellular response to chemical stimulus 2512
          cellular response to nutrient 67
            carbon catabolite regulation of transcription + 10
            catabolite repression + 0
            cellular response to methionine 1
            cellular response to vitamin + 46
            nitrogen catabolite regulation of transcription + 0
Path 2
Term Annotations click to browse term
  biological_process 12288
    response to stimulus 6664
      response to external stimulus 2468
        response to extracellular stimulus 715
          cellular response to extracellular stimulus 303
            cellular response to nutrient levels 267
              cellular response to nutrient 67
                carbon catabolite regulation of transcription + 10
                catabolite repression + 0
                cellular response to methionine 1
                cellular response to vitamin + 46
                nitrogen catabolite regulation of transcription + 0
paths to the root