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ONTOLOGY REPORT - ANNOTATIONS


Term:telomeric loop formation
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Accession:GO:0031627 term browser browse the term
Definition:The process in which linear telomeric DNA is remodeled into duplex loops, by the invasion of a 3' single-stranded overhang into the duplex region.
Synonyms:exact_synonym: t-loop biosynthesis;   t-loop formation


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telomeric loop formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dclre1b DNA cross-link repair 1B involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:4830207|PMID:20619712)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:20619712 GO_REF:0000024 GO_REF:0000107 MGI:4830207 NCBI chr 2:191,309,909...191,318,399
Ensembl chr 2:191,309,913...191,318,423
JBrowse link
G Pot1 protection of telomeres 1 NOT|involved_in ISO UniProtKB:H7BX60 (MGI:5883205|PMID:24120135) RGD PMID:24120135 MGI:5883205 NCBI chr 4:54,205,330...54,263,137
Ensembl chr 4:54,205,332...54,263,042
JBrowse link
G Terf1 telomeric repeat binding factor 1 NOT|involved_in ISO (MGI:5883205|PMID:24120135) RGD PMID:24120135 MGI:5883205 NCBI chr 5:3,443,103...3,472,377
Ensembl chr 5:3,443,106...3,472,340
JBrowse link
G Terf2 telomeric repeat binding factor 2 involved_in IBA
ISO
PMID:21873635
(MGI:5883205|PMID:24120135)
(PMID:10338214)
RGD PMID:10338214 PMID:24120135 PMID:21873635 MGI:5883205, RGD:13792537 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819
JBrowse link
G Terf2ip TERF2 interacting protein NOT|involved_in ISO (MGI:5883205|PMID:24120135) RGD PMID:24120135 MGI:5883205 NCBI chr19:39,976,965...39,984,055
Ensembl chr19:39,976,906...39,984,064
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    metabolic process 11797
      cellular metabolic process 10717
        cellular macromolecule metabolic process 8204
          DNA metabolic process 883
            telomere maintenance 128
              telomeric loop formation 5
                negative regulation of telomeric loop formation 0
                positive regulation of telomeric loop formation 0
                regulation of telomeric loop formation + 0
Path 2
Term Annotations click to browse term
  biological_process 19492
    metabolic process 11797
      cellular metabolic process 10717
        cellular nitrogen compound metabolic process 6561
          nucleobase-containing compound metabolic process 5378
            nucleic acid metabolic process 4888
              DNA metabolic process 883
                telomere maintenance 128
                  telomeric loop formation 5
                    negative regulation of telomeric loop formation 0
                    positive regulation of telomeric loop formation 0
                    regulation of telomeric loop formation + 0
paths to the root