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ONTOLOGY REPORT - ANNOTATIONS

Term:wybutosine metabolic process
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Accession:GO:0031590 term browser browse the term
Definition:The chemical reactions and pathways involving wybutosine, 3H-imidazo[1,2-alpha]purine-7-butanoic acid, 4,9-dihydro- alpha-[(methoxycarbonyl)amino]- 4,6-dimethyl-9-oxo- 3-beta-D-ribofuranosyl methyl ester, a modified nucleoside found in some tRNA molecules.
Synonyms:exact_synonym: wybutosine metabolism;   yW metabolic process;   yW metabolism


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wybutosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lcmt2 leucine carboxyl methyltransferase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:108,099,960...108,102,084
Ensembl chr 3:108,099,961...108,102,084 		JBrowse link
G Trmt12 tRNA methyltransferase 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:90,417,846...90,419,472
Ensembl chr 7:90,417,862...90,419,867 		JBrowse link
G Tyw1 tRNA-yW synthesizing protein 1 homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:26,332,020...26,418,286
Ensembl chr12:26,330,351...26,418,208 		JBrowse link
G Tyw3 tRNA-yW synthesizing protein 3 homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:243,529,912...243,552,043
Ensembl chr 2:243,529,946...243,552,039 		JBrowse link
G Tyw5 tRNA-yW synthesizing protein 5 involved_in ISO
IBA		 (PMID:20739293), (PMID:20972222)
GO_REF:0000033		 RGD
GO_Central		 PMID:20739293 PMID:20972222 GO_REF:0000033 NCBI chr 9:58,961,100...58,979,188
Ensembl chr 9:58,961,106...58,979,188 		JBrowse link
Term paths to the root
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  biological_process 20076
    cellular process 19155
      metabolic process 11953
        carbohydrate derivative metabolic process 1040
          glycosyl compound metabolic process 81
            wybutosine metabolic process 5
              wybutosine biosynthetic process 5
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