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ONTOLOGY REPORT - ANNOTATIONS


Term:membrane raft organization
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Accession:GO:0031579 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of membrane rafts, small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes.
Synonyms:exact_synonym: lipid raft organization;   membrane raft organisation
 related_synonym: membrane raft organization and biogenesis


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membrane raft organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav3 caveolin 3 acts_upstream_of_or_within ISO MGI:2180558 (MGI:2135840|PMID:11259414), (MGI:2682500|PMID:14600260) RGD PMID:11259414 PMID:14600260 MGI:2135840 MGI:2682500 NCBI chr 4:145,582,168...145,598,142
Ensembl chr 4:145,582,060...145,598,137
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3528803|PMID:15699074)
Ensembl
RGD
PMID:15699074 GO_REF:0000107 MGI:3528803 NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689
JBrowse link
G Myadm myeloid-associated differentiation marker involved_in ISO
IEA
(PMID:21325632)
GO_REF:0000107
RGD
Ensembl
PMID:21325632 GO_REF:0000107 NCBI chr 1:65,864,180...65,874,701
Ensembl chr 1:65,864,173...65,874,035
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in ISO (PMID:23360953) RGD PMID:23360953 NCBI chr18:3,379,482...3,425,100
Ensembl chr18:3,379,482...3,425,049
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:3614822 (MGI:5618468|PMID:17971504) RGD PMID:17971504 MGI:5618468 NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714
JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 involved_in ISS
ISO
PMID:8895569
(PMID:15929065)
RGD PMID:15929065 PMID:8895569 RGD:8553248 NCBI chr 5:135,121,176...135,141,076
Ensembl chr 5:135,121,163...135,142,048
JBrowse link
caveola assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
UniProtKB:Q03135 (MGI:5607358|PMID:25006397)
MGI:2180372 (MGI:2176684|PMID:11884617), (MGI:3629009|PMID:12759260)
GO_REF:0000107
(PMID:12743374)
UniProtKB:P49817 (PMID:12633858), (PMID:25006397)
RGD
Ensembl
PMID:11884617 PMID:12633858 PMID:12743374 PMID:12759260 PMID:25006397 More... GO_REF:0000107 MGI:2176684 MGI:3629009 MGI:5607358, RGD:13792537 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Cav2 caveolin 2 involved_in IEA
ISS
IBA
ISO
GO_REF:0000107
PMID:12633858
PMID:21873635
(PMID:12633858), (PMID:12743374)
Ensembl
RGD
PMID:12633858 PMID:12743374 PMID:12633858 PMID:21873635 GO_REF:0000107, RGD:8553562, RGD:13792537 NCBI chr 4:45,616,766...45,624,144
Ensembl chr 4:45,616,712...45,624,244
JBrowse link
G Cav3 caveolin 3 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:18936328)
MGI:2684578 (MGI:3772152|PMID:18054955)
RGD PMID:18054955 PMID:18936328 PMID:21873635 MGI:3772152, RGD:13792537 NCBI chr 4:145,582,168...145,598,142
Ensembl chr 4:145,582,060...145,598,137
JBrowse link
G Emp2 epithelial membrane protein 2 NOT|involved_in ISS
ISO
GO_REF:0000024
(MGI:3047005|PMID:14978215)
UniProt
RGD
PMID:14978215 GO_REF:0000024 MGI:3047005 NCBI chr10:5,360,073...5,394,734
Ensembl chr10:5,360,073...5,394,733
JBrowse link
G Pacsin2 protein kinase C and casein kinase substrate in neurons 2 involved_in IEA
ISO
ISS
GO_REF:0000002
(PMID:21610094)
GO_REF:0000024
InterPro
RGD
UniProt
PMID:21610094 GO_REF:0000002 GO_REF:0000024 NCBI chr 7:114,505,525...114,599,087
Ensembl chr 7:114,505,152...114,598,546
JBrowse link
membrane raft assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO (PMID:23861394) RGD PMID:23861394 NCBI chr 8:70,105,268...70,141,663
Ensembl chr 8:70,105,253...70,141,658
JBrowse link
G Emp2 epithelial membrane protein 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3047005|PMID:14978215)
UniProt
RGD
PMID:14978215 GO_REF:0000024 MGI:3047005 NCBI chr10:5,360,073...5,394,734
Ensembl chr10:5,360,073...5,394,733
JBrowse link
G Flot1 flotillin 1 involved_in ISO (PMID:25204797) RGD PMID:25204797 NCBI chr20:2,917,864...2,927,993
Ensembl chr20:2,917,137...2,927,978
JBrowse link
G Flot2 flotillin 2 involved_in ISO (PMID:25204797) RGD PMID:25204797 NCBI chr10:62,926,047...62,947,759
Ensembl chr10:62,920,665...62,947,756
JBrowse link
G Rftn1 raftlin lipid raft linker 1 involved_in ISO (PMID:12805216) RGD PMID:12805216 NCBI chr 9:10,804,611...11,002,084
Ensembl chr 9:10,804,611...11,002,084
JBrowse link
G S100a10 S100 calcium binding protein A10 involved_in ISO (PMID:23861394) RGD PMID:23861394 NCBI chr 2:179,221,012...179,229,659
Ensembl chr 2:179,220,887...179,229,661
JBrowse link
membrane raft distribution term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naxe NAD(P)HX epimerase involved_in ISS
ISO
GO_REF:0000024
ZFIN:ZDB-MRPHLNO-130813-3 (PMID:23719382)
UniProt
RGD
PMID:23719382 GO_REF:0000024 NCBI chr 2:173,518,966...173,521,048
Ensembl chr 2:173,518,971...173,521,040
JBrowse link
membrane raft polarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dock2 dedicator of cytokinesis 2 acts_upstream_of_or_within ISO MGI:2152031 (MGI:2668308|PMID:12871644) RGD PMID:12871644 MGI:2668308 NCBI chr10:18,827,237...19,244,823 JBrowse link
plasma membrane raft assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flot1 flotillin 1 involved_in ISO (PMID:21399631) RGD PMID:21399631 NCBI chr20:2,917,864...2,927,993
Ensembl chr20:2,917,137...2,927,978
JBrowse link
plasma membrane raft distribution term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptprc protein tyrosine phosphatase, receptor type, C involved_in ISO UniProtKB:P05480 (MGI:3530407|PMID:15661907) RGD PMID:15661907 MGI:3530407 NCBI chr13:49,596,193...49,708,283
Ensembl chr13:49,596,193...49,708,692
JBrowse link
plasma membrane raft organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca7 ATP binding cassette subfamily A member 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:6274964|PMID:28091533)
UniProt
RGD
PMID:28091533 GO_REF:0000024 MGI:6274964 NCBI chr 7:9,691,452...9,711,466
Ensembl chr 7:9,691,449...9,711,425
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (MGI:5529746|PMID:24227717) RGD PMID:24227717 MGI:5529746 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
G Fa2h fatty acid 2-hydroxylase involved_in ISS
ISO
GO_REF:0000024
(MGI:6245295|PMID:22517924)
UniProt
RGD
PMID:22517924 GO_REF:0000024 MGI:6245295 NCBI chr19:39,312,904...39,364,153
Ensembl chr19:39,312,906...39,364,153
JBrowse link
regulation of plasma membrane raft polarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsn gelsolin involved_in ISO (PMID:23575248) RGD PMID:23575248 NCBI chr 3:18,585,166...18,638,404
Ensembl chr 3:18,585,172...18,638,402
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    cellular process 18340
      cellular component organization or biogenesis 6481
        cellular component organization 6235
          membrane organization 871
            membrane raft organization 22
              membrane raft assembly + 10
              membrane raft distribution + 4
              plasma membrane raft organization + 9
              protein insertion into membrane raft + 0
paths to the root