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ONTOLOGY REPORT - ANNOTATIONS

Term:membrane raft organization
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Accession:GO:0031579 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of membrane rafts, small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes.
Synonyms:exact_synonym: lipid raft organization;   membrane raft organisation
 related_synonym: membrane raft organization and biogenesis


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membrane raft organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav3 caveolin 3 acts_upstream_of_or_within ISO
IEA		 MGI:2180558 (PMID:11259414), (PMID:14600260)
GO_REF:0000107		 RGD
Ensembl		 PMID:11259414 PMID:14600260 GO_REF:0000107 NCBI chr 4:147,137,993...147,153,967
Ensembl chr 4:145,582,060...145,598,137 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 acts_upstream_of_or_within ISO
IEA		 (PMID:15699074)
GO_REF:0000107		 RGD
Ensembl		 PMID:15699074 GO_REF:0000107 NCBI chr11:82,416,853...82,607,797
Ensembl chr11:68,911,883...69,102,689 		JBrowse link
G Myadm myeloid-associated differentiation marker involved_in ISO
IEA		 (PMID:21325632)
GO_REF:0000107		 RGD
Ensembl		 PMID:21325632 GO_REF:0000107 NCBI chr 1:65,864,180...65,874,701
Ensembl chr 1:65,864,173...65,874,035 		JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in ISO
IEA		 (PMID:23360953)
GO_REF:0000107		 RGD
Ensembl		 PMID:23360953 GO_REF:0000107 NCBI chr18:3,654,237...3,699,853
Ensembl chr18:3,379,482...3,425,049 		JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:3614822 (PMID:17971504) RGD PMID:17971504 NCBI chr10:48,294,932...48,324,941
Ensembl chr10:47,795,709...47,825,714 		JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 involved_in ISS
IEA
ISO		 PMID:8895569
GO_REF:0000107
(PMID:15929065)		 Ensembl
RGD		 PMID:15929065 PMID:8895569 GO_REF:0000107, RGD:8553248 NCBI chr 5:140,406,318...140,427,201
Ensembl chr 5:135,121,163...135,142,048 		JBrowse link
caveola assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 UniProtKB:P49817 (PMID:12633858), (PMID:25006397)
GO_REF:0000107
UniProtKB:Q03135 (PMID:25006397)
MGI:2180372 (PMID:11884617), (PMID:12759260)
GO_REF:0000033
GO_REF:0000002
(PMID:12743374)		 RGD
Ensembl
GO_Central
InterPro		 PMID:11884617 PMID:12633858 PMID:12743374 PMID:12759260 PMID:25006397 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:46,606,538...46,639,616
Ensembl chr 4:45,634,918...45,673,705 		JBrowse link
G Cav2 caveolin 2 involved_in IEA
IBA
ISS
ISO		 GO_REF:0000107
GO_REF:0000002
GO_REF:0000033
PMID:12633858
(PMID:12633858), (PMID:12743374)		 Ensembl
InterPro
GO_Central
RGD		 PMID:12633858 PMID:12743374 PMID:12633858 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107, RGD:8553562 NCBI chr 4:46,582,681...46,590,058
Ensembl chr 4:45,616,712...45,624,244 		JBrowse link
G Cav3 caveolin 3 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:18936328)
GO_REF:0000107
GO_REF:0000002
MGI:2684578 (PMID:18054955)
GO_REF:0000033		 RGD
Ensembl
InterPro
GO_Central		 PMID:18054955 PMID:18936328 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:147,137,993...147,153,967
Ensembl chr 4:145,582,060...145,598,137 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO
IEA		 MGI:2153356 (PMID:19114551)
GO_REF:0000107		 RGD
Ensembl		 PMID:19114551 GO_REF:0000107 NCBI chr20:11,905,690...11,924,111
Ensembl chr20:11,905,957...11,924,597 		JBrowse link
G Emp2 epithelial membrane protein 2 NOT|involved_in ISS
ISO		 GO_REF:0000024
(PMID:14978215)		 UniProt
RGD		 PMID:14978215 GO_REF:0000024 NCBI chr10:5,866,869...5,901,533
Ensembl chr10:5,360,073...5,394,733 		JBrowse link
G Ilk integrin-linked kinase involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:20951348)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:20951348 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:169,500,716...169,506,972
Ensembl chr 1:160,088,897...160,095,140 		JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 involved_in ISO
IEA		 (PMID:20951348)
GO_REF:0000107		 RGD
Ensembl		 PMID:20951348 GO_REF:0000107 NCBI chr 1:144,088,788...144,178,989
Ensembl chr 1:134,679,586...134,769,755 		JBrowse link
G Pacsin2 protein kinase C and casein kinase substrate in neurons 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000002
(PMID:21610094)		 UniProt
Ensembl
InterPro
RGD		 PMID:21610094 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:116,385,571...116,478,609
Ensembl chr 7:114,505,152...114,598,546 		JBrowse link
membrane raft assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO (PMID:23861394) RGD PMID:23861394 NCBI chr 8:78,986,252...79,022,638
Ensembl chr 8:70,105,253...70,141,658 		JBrowse link
G Emp2 epithelial membrane protein 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:14978215)		 UniProt
RGD		 PMID:14978215 GO_REF:0000024 NCBI chr10:5,866,869...5,901,533
Ensembl chr10:5,360,073...5,394,733 		JBrowse link
G Lrch4 leucine rich repeats and calponin homology domain containing 4 involved_in ISO (PMID:16449650) RGD PMID:16449650 NCBI chr12:24,694,364...24,709,354
Ensembl chr12:19,057,587...19,068,577 		JBrowse link
G Rftn1 raftlin lipid raft linker 1 involved_in ISO (PMID:12805216) RGD PMID:12805216 NCBI chr 9:18,302,143...18,499,819
Ensembl chr 9:10,804,611...11,002,084 		JBrowse link
G S100a10 S100 calcium binding protein A10 involved_in ISO (PMID:23861394) RGD PMID:23861394 NCBI chr 2:181,904,454...181,913,101
Ensembl chr 2:179,220,887...179,229,661 		JBrowse link
membrane raft distribution term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lat linker for activation of T cells involved_in ISO (PMID:33080222) RGD PMID:33080222 NCBI chr 1:190,367,111...190,372,515
Ensembl chr 1:180,936,534...180,941,578 		JBrowse link
G Naxe NAD(P)HX epimerase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
ZFIN:ZDB-MRPHLNO-130813-3 (PMID:23719382)		 UniProt
Ensembl
RGD		 PMID:23719382 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:173,518,971...173,521,036
Ensembl chr 2:173,518,971...173,521,040 		JBrowse link
membrane raft polarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dock2 dedicator of cytokinesis 2 acts_upstream_of_or_within ISO
IEA		 MGI:2152031 (PMID:12871644)
GO_REF:0000107		 RGD
Ensembl		 PMID:12871644 GO_REF:0000107 NCBI chr10:19,331,412...19,748,987
Ensembl chr10:18,827,239...19,244,808 		JBrowse link
plasma membrane raft assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Emp2 epithelial membrane protein 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:31550239)		 UniProt
RGD		 PMID:31550239 GO_REF:0000024 NCBI chr10:5,866,869...5,901,533
Ensembl chr10:5,360,073...5,394,733 		JBrowse link
G Flot1 flotillin 1 involved_in ISO
IEA		 (PMID:21399631)
GO_REF:0000107		 RGD
Ensembl		 PMID:21399631 GO_REF:0000107 NCBI chr20:2,922,662...2,932,906
Ensembl chr20:2,917,137...2,927,978 		JBrowse link
G Mir138-1 microRNA 138-1 involved_in ISO (PMID:23319823) RGD PMID:23319823 NCBI chr 8:131,178,434...131,178,532
Ensembl chr 8:122,300,966...122,301,064 		JBrowse link
G Mir138-2 microRNA 138-2 involved_in ISO (PMID:23319823) RGD PMID:23319823 NCBI chr19:10,680,133...10,680,214
Ensembl chr19:10,674,193...10,674,274 		JBrowse link
plasma membrane raft distribution term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptprc protein tyrosine phosphatase, receptor type, C involved_in ISO UniProtKB:P05480 (PMID:15661907) RGD PMID:15661907 NCBI chr13:52,147,717...52,259,810
Ensembl chr13:49,596,193...49,708,692 		JBrowse link
plasma membrane raft organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca7 ATP binding cassette subfamily A member 7 involved_in ISS
ISO		 GO_REF:0000024
(PMID:28091533)		 UniProt
RGD		 PMID:28091533 GO_REF:0000024 NCBI chr 7:10,342,092...10,362,094
Ensembl chr 7:9,691,449...9,711,425 		JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO
IEA		 (PMID:24227717)
GO_REF:0000107		 RGD
Ensembl		 PMID:24227717 GO_REF:0000107 NCBI chr 1:190,586,649...190,600,034
Ensembl chr 1:181,156,073...181,167,434 		JBrowse link
G Colec12 collectin sub-family member 12 acts_upstream_of_positive_effect ISO (PMID:25204797) RGD PMID:25204797 NCBI chr18:1,005,787...1,193,455
Ensembl chr18:732,950...920,618 		JBrowse link
G Fa2h fatty acid 2-hydroxylase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:22517924)		 UniProt
Ensembl
RGD		 PMID:22517924 GO_REF:0000024 GO_REF:0000107 NCBI chr19:39,312,904...39,364,153
Ensembl chr19:39,312,906...39,364,153 		JBrowse link
G Flot1 flotillin 1 acts_upstream_of_positive_effect ISO
IEA		 (PMID:25204797)
GO_REF:0000107		 RGD
Ensembl		 PMID:25204797 GO_REF:0000107 NCBI chr20:2,922,662...2,932,906
Ensembl chr20:2,917,137...2,927,978 		JBrowse link
regulation of plasma membrane raft polarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsn gelsolin involved_in ISO
IEA		 (PMID:23575248)
GO_REF:0000107		 RGD
Ensembl		 PMID:23575248 GO_REF:0000107 NCBI chr 3:38,982,605...39,035,849
Ensembl chr 3:18,585,172...18,638,402 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    cellular process 19550
      cellular component organization or biogenesis 7104
        cellular component organization 6817
          membrane organization 829
            membrane raft organization 29
              membrane raft assembly + 15
              membrane raft distribution + 5
              plasma membrane raft organization + 15
              protein insertion into membrane raft + 0
paths to the root