ONTOLOGY REPORT - ANNOTATIONS
Term: DNA integrity checkpoint signaling
Accession: GO:0031570
browse the term
Definition: A signaling process that controls cell cycle progression in response to changes in DNA structure by monitoring the integrity of the DNA. The DNA integrity checkpoint begins with detection of DNA damage, defects in DNA structure or DNA replication, and progresses through signal transduction and ends with cell cycle effector processes.
Synonyms: exact_synonym: DNA integrity checkpoint; signal transduction involved in DNA integrity checkpoint
alt_id: GO:0072401
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Atm
ATM serine/threonine kinase
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 (PMID:30886146) (MGI:2679752|PMID:12937170)
RGD
PMID:12937170 PMID:30886146 PMID:21873635
MGI:2679752 , RGD:13792537
NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
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Atr
ATR serine/threonine kinase
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:14657349) PMID:21873635 (MGI:2679752|PMID:12937170)
RGD
PMID:12937170 PMID:14657349 PMID:21873635
MGI:2679752 , RGD:13792537
NCBI chr 8:96,426,704...96,524,152
Ensembl chr 8:96,426,724...96,524,136
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Atrip
ATR interacting protein
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 8:109,708,440...109,722,511
Ensembl chr 8:109,708,440...109,722,477
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Cdc5l
cell division cycle 5-like
involved_in
ISS ISO
GO_REF:0000024 (PMID:24332808)
UniProt RGD
PMID:24332808
GO_REF:0000024
NCBI chr 9:15,564,949...15,603,453
Ensembl chr 9:15,564,767...15,603,450
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Cep63
centrosomal protein 63
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 8:103,162,639...103,214,177
Ensembl chr 8:103,162,700...103,214,177
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Chek1
checkpoint kinase 1
involved_in acts_upstream_of_or_within
ISO IEA ISS
(PMID:16963448), (PMID:19716789) GO_REF:0000002 MGI:1926528 (MGI:1860049|PMID:10859164), (MGI:2449744|PMID:12529385) GO_REF:0000024
RGD InterPro UniProt
PMID:10859164 PMID:12529385 PMID:16963448 PMID:19716789
GO_REF:0000002 GO_REF:0000024 MGI:1860049 MGI:2449744
NCBI chr 8:36,420,565...36,443,477
Ensembl chr 8:36,420,569...36,441,009
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Chek2
checkpoint kinase 2
IMP
RGD
PMID:10435585
RGD:633752
NCBI chr12:45,788,823...45,821,382
Ensembl chr12:45,788,827...45,821,286
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Clock
clock circadian regulator
involved_in
ISO IEA
(PMID:21659603) GO_REF:0000107
RGD Ensembl
PMID:21659603
GO_REF:0000107
NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
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Clspn
claspin
involved_in
ISO
(PMID:16963448)
RGD
PMID:16963448
NCBI chr 5:138,850,119...138,885,037
Ensembl chr 5:138,850,128...138,885,034
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Donson
DNA replication fork stabilization factor DONSON
involved_in
ISO
(PMID:28191891)
RGD
PMID:28191891
NCBI chr11:30,911,616...30,933,150
Ensembl chr11:30,923,239...30,932,889
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Dot1l
DOT1 like histone lysine methyltransferase
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 7:8,917,786...8,959,474
Ensembl chr 7:8,917,786...8,956,475
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Dtx3l
deltex E3 ubiquitin ligase 3L
involved_in
ISO
(PMID:28525742)
RGD
PMID:28525742
NCBI chr11:64,814,926...64,824,538
Ensembl chr11:64,814,926...64,824,538
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E2f1
E2F transcription factor 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:12717439)
UniProt RGD
PMID:12717439
GO_REF:0000024
NCBI chr 3:143,064,535...143,075,362
Ensembl chr 3:143,049,478...143,075,361
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Eif2ak4
eukaryotic translation initiation factor 2 alpha kinase 4
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 3:105,356,261...105,441,630
Ensembl chr 3:105,356,261...105,441,630
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Ercc6
ERCC excision repair 6, chromatin remodeling factor
involved_in
ISO
(PMID:25820262)
RGD
PMID:25820262
NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587
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H2ax
H2A.X variant histone
involved_in NOT|acts_upstream_of_or_within
ISO
(PMID:17974976) MGI:2156048 (MGI:2179182|PMID:11934988)
RGD
PMID:11934988 PMID:17974976
MGI:2179182
NCBI chr 8:44,671,927...44,673,257
Ensembl chr 8:44,671,786...44,673,239
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Hinfp
histone H4 transcription factor
involved_in
ISO
(PMID:17974976)
RGD
PMID:17974976
NCBI chr 8:44,634,333...44,644,288
Ensembl chr 8:44,634,333...44,641,000
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Hus1
HUS1 checkpoint clamp component
involved_in acts_upstream_of_or_within
ISO
(PMID:21659603) MGI:1927769 (MGI:2449744|PMID:12529385)
RGD
PMID:12529385 PMID:21659603
MGI:2449744
NCBI chr14:83,688,702...83,703,466
Ensembl chr14:83,688,708...83,703,442
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Ints7
integrator complex subunit 7
involved_in
ISO
(PMID:21659603)
RGD
PMID:21659603
NCBI chr13:103,155,123...103,207,953
Ensembl chr13:103,155,090...103,208,592
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Map3k20
mitogen-activated protein kinase kinase kinase 20
involved_in
ISO
(PMID:11836244)
RGD
PMID:11836244
NCBI chr 3:57,128,561...57,289,943
Ensembl chr 3:57,130,551...57,289,626
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Mapk14
mitogen activated protein kinase 14
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (MGI:2679752|PMID:12937170)
Ensembl RGD
PMID:12937170
GO_REF:0000107 MGI:2679752
NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
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Nbn
nibrin
acts_upstream_of_or_within
ISO
(PMID:12529385)
RGD
PMID:12529385
NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150
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Parp9
poly (ADP-ribose) polymerase family, member 9
involved_in
ISO
(PMID:28525742)
RGD
PMID:28525742
NCBI chr11:64,780,977...64,814,995
Ensembl chr11:64,780,981...64,815,455
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Prpf19
pre-mRNA processing factor 19
involved_in
ISS ISO
GO_REF:0000024 (PMID:24332808)
UniProt RGD
PMID:24332808
GO_REF:0000024
NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662
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Ptpn11
protein tyrosine phosphatase, non-receptor type 11
acts_upstream_of_or_within
ISO
MGI:2176524 (MGI:2679752|PMID:12937170)
RGD
PMID:12937170
MGI:2679752
NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925
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Rad1
RAD1 checkpoint DNA exonuclease
involved_in
ISO IBA
(PMID:21659603) PMID:21873635
RGD
PMID:21659603 PMID:21873635
RGD:13792537
NCBI chr 2:59,461,597...59,469,707
Ensembl chr 2:59,461,607...59,469,689
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Rad17
RAD17 checkpoint clamp loader component
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 2:31,764,260...31,794,542
Ensembl chr 2:31,764,261...31,794,072
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Rad9a
RAD9 checkpoint clamp component A
involved_in
ISO
(PMID:21659603)
RGD
PMID:21659603
NCBI chr 1:201,488,511...201,553,582
Ensembl chr 1:201,487,136...201,553,608
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Rad9b
RAD9 checkpoint clamp component B
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr12:34,217,868...34,248,380
Ensembl chr12:34,218,024...34,248,372
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Rhno1
RAD9-HUS1-RAD1 interacting nuclear orphan 1
involved_in
ISO IBA
(PMID:21659603) PMID:21873635
RGD
PMID:21659603 PMID:21873635
RGD:13792537
NCBI chr 4:161,634,047...161,639,437
Ensembl chr 4:161,634,048...161,639,371
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Rhno1-ps2
RAD9-HUS1-RAD1 interacting nuclear orphan 1, pseudogene 2
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 2:184,691,837...184,692,948
Ensembl chr 2:184,691,839...184,692,926
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Tipin
timeless interacting protein
acts_upstream_of_or_within
ISO
(MGI:3706226|PMID:17141802)
RGD
PMID:17141802
MGI:3706226
NCBI chr 8:64,780,741...64,801,355
Ensembl chr 8:64,780,828...64,801,352
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Tiprl
TOR signaling pathway regulator
involved_in
ISO
(PMID:17384681)
RGD
PMID:17384681
NCBI chr13:77,527,176...77,552,026
Ensembl chr13:77,527,176...77,552,074
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Tp53bp1
tumor protein p53 binding protein 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 3:108,166,574...108,270,229
Ensembl chr 3:108,169,980...108,269,822
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Trex1
three prime repair exonuclease 1
acts_upstream_of_or_within
ISO
(MGI:3818783|PMID:18045533)
RGD
PMID:18045533
MGI:3818783
NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796
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Ufl1
Ufm1-specific ligase 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:30886146)
UniProt RGD
PMID:30886146
GO_REF:0000024
NCBI chr 5:38,962,721...38,995,134
Ensembl chr 5:38,962,171...38,995,199
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Usp28
ubiquitin specific peptidase 28
involved_in
ISS IBA ISO
GO_REF:0000024 PMID:21873635 (PMID:18662541)
UniProt RGD
PMID:18662541 PMID:21873635
GO_REF:0000024, RGD:13792537
NCBI chr 8:49,325,766...49,386,229
Ensembl chr 8:49,325,867...49,386,229
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Casp2
caspase 2
involved_in
ISO
(PMID:21726810)
RGD
PMID:21726810
NCBI chr 4:71,149,632...71,167,388
Ensembl chr 4:71,149,669...71,167,379
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Cdkn1a
cyclin-dependent kinase inhibitor 1A
involved_in
ISO
(PMID:15149599)
RGD
PMID:15149599
NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585
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Cradd
CASP2 and RIPK1 domain containing adaptor with death domain
involved_in
ISO IBA
(PMID:21726810) PMID:21873635
RGD
PMID:21726810 PMID:21873635
RGD:13792537
NCBI chr 7:29,940,240...29,952,907
Ensembl chr 7:29,798,586...29,952,907
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Mdm2
MDM2 proto-oncogene
involved_in
ISO
(PMID:21726810)
RGD
PMID:21726810
NCBI chr 7:53,290,660...53,315,205
Ensembl chr 7:53,290,664...53,314,915
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Muc1
mucin 1, cell surface associated
involved_in
ISO
(PMID:15710329)
RGD
PMID:15710329
NCBI chr 2:174,635,559...174,640,738
Ensembl chr 2:174,635,995...174,640,733
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Pcbp4
poly(rC) binding protein 4
involved_in
ISO
(PMID:10891498)
RGD
PMID:10891498
NCBI chr 8:107,092,688...107,103,276
Ensembl chr 8:107,093,013...107,103,276
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Pidd1
p53-induced death domain protein 1
involved_in
ISO
(PMID:21726810)
RGD
PMID:21726810
NCBI chr 1:196,536,815...196,542,808
Ensembl chr 1:196,536,834...196,542,699
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Pml
PML nuclear body scaffold
involved_in
ISO
(MGI:3580934|PMID:15626733)
RGD
PMID:15626733
MGI:3580934
NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971
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Ppp2r5c
protein phosphatase 2, regulatory subunit B', gamma
involved_in
ISO
(PMID:17245430)
RGD
PMID:17245430
NCBI chr 6:129,461,689...129,598,344
Ensembl chr 6:129,461,648...129,598,346
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Prap1
proline-rich acidic protein 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:23235459)
UniProt RGD
PMID:23235459
GO_REF:0000024
NCBI chr 1:194,883,078...194,886,874
Ensembl chr 1:194,883,078...194,886,872
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Rbm38
RNA binding motif protein 38
involved_in
ISO
(PMID:17050675)
RGD
PMID:17050675
NCBI chr 3:161,801,550...161,814,381
Ensembl chr 3:161,801,577...161,814,381
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Rpl26
ribosomal protein L26
involved_in
ISO
(PMID:16213212) (MGI:5882892|PMID:16213212)
RGD
PMID:16213212
MGI:5882892
NCBI chr10:53,610,836...53,613,966
Ensembl chr10:53,610,421...53,613,966
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Tp53
tumor protein p53
involved_in acts_upstream_of_or_within
ISO
(PMID:16213212) MGI:108027 (MGI:3589512|PMID:16107883)
RGD
PMID:16107883 PMID:16213212
MGI:3589512
NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
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Cdt1
chromatin licensing and DNA replication factor 1
involved_in
IBA ISO
PMID:21873635 (MGI:2388867|PMID:12192004) (PMID:14672932)
RGD
PMID:12192004 PMID:14672932 PMID:21873635
MGI:2388867 , RGD:13792537
NCBI chr19:50,620,713...50,625,659
Ensembl chr19:50,620,713...50,625,659
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Clspn
claspin
acts_upstream_of_or_within
ISO
(PMID:12766152) (PMID:16123041)
RGD
PMID:12766152 PMID:16123041
NCBI chr 5:138,850,119...138,885,037
Ensembl chr 5:138,850,128...138,885,034
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Dna2
DNA replication helicase/nuclease 2
involved_in
ISS IEA
GO_REF:0000024 GO_REF:0000107
UniProt Ensembl
GO_REF:0000024 GO_REF:0000107
NCBI chr20:25,661,652...25,690,598
Ensembl chr20:25,662,055...25,716,319
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Rad9a
RAD9 checkpoint clamp component A
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 1:201,488,511...201,553,582
Ensembl chr 1:201,487,136...201,553,608
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Rad9b
RAD9 checkpoint clamp component B
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr12:34,217,868...34,248,380
Ensembl chr12:34,218,024...34,248,372
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Slc25a16
solute carrier family 25 member 16
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr20:25,661,158...25,717,558
Ensembl chr20:25,662,055...25,716,319
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Timeless
timeless circadian regulator
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738
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Tipin
timeless interacting protein
involved_in
ISO ISS IEA IBA
(PMID:17102137) GO_REF:0000024 GO_REF:0000104 PMID:21873635
RGD UniProt
PMID:17102137 PMID:21873635
GO_REF:0000024 GO_REF:0000104, RGD:13792537
NCBI chr 8:64,780,741...64,801,355
Ensembl chr 8:64,780,828...64,801,352
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Tipinl1
TIMELESS interacting protein like 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 9:113,542,841...113,544,022
Ensembl chr 9:113,543,173...113,605,998
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Hus1
HUS1 checkpoint clamp component
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr14:83,688,702...83,703,466
Ensembl chr14:83,688,708...83,703,442
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Chek2
checkpoint kinase 2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr12:45,788,823...45,821,382
Ensembl chr12:45,788,827...45,821,286
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Stk33
serine/threonine kinase 33
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 1:163,276,176...163,458,580
Ensembl chr 1:163,276,340...163,458,627
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Zfp830
zinc finger protein 830
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 MGI:3583779 (MGI:5428139|PMID:23213458)
RGD
PMID:23213458 PMID:21873635
MGI:5428139 , RGD:13792537
NCBI chr10:67,701,340...67,702,804
Ensembl chr10:67,701,073...67,704,523
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Setmar
SET domain and mariner transposase fusion gene
involved_in
ISO
(PMID:18790802)
RGD
PMID:18790802
NCBI chr 4:141,046,058...141,058,183
Ensembl chr 4:141,046,069...141,058,197
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Cdc6
cell division cycle 6
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr10:83,864,189...83,878,011
Ensembl chr10:83,864,638...83,878,011
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Clspn
claspin
involved_in
ISO IBA
(PMID:16885022) PMID:21873635
RGD
PMID:16885022 PMID:21873635
RGD:13792537
NCBI chr 5:138,850,119...138,885,037
Ensembl chr 5:138,850,128...138,885,034
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Hus1
HUS1 checkpoint clamp component
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr14:83,688,702...83,703,466
Ensembl chr14:83,688,708...83,703,442
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Nae1
NEDD8 activating enzyme E1 subunit 1
involved_in
ISO IEA
(PMID:10722740) GO_REF:0000107
RGD Ensembl
PMID:10722740
GO_REF:0000107
NCBI chr19:446,015...472,145
Ensembl chr19:446,000...472,371
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Orc1
origin recognition complex, subunit 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 5:123,324,273...123,348,375
Ensembl chr 5:123,324,315...123,348,375
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Rad17
RAD17 checkpoint clamp loader component
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 2:31,764,260...31,794,542
Ensembl chr 2:31,764,261...31,794,072
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Ticrr
TOPBP1-interacting checkpoint and replication regulator
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 1:133,597,618...133,639,513
Ensembl chr 1:133,597,716...133,639,523
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Topbp1
DNA topoisomerase II binding protein 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 8:103,887,805...103,931,662
Ensembl chr 8:103,887,865...103,931,674
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Zfp830
zinc finger protein 830
involved_in
ISS IBA ISO
GO_REF:0000024 PMID:21873635 (MGI:4950701|PMID:21191184)
UniProt RGD
PMID:21191184 PMID:21873635
GO_REF:0000024 MGI:4950701 , RGD:13792537
NCBI chr10:67,701,340...67,702,804
Ensembl chr10:67,701,073...67,704,523
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Ccnd1
cyclin D1
involved_in
ISS ISO
GO_REF:0000024 (PMID:19412162)
UniProt RGD
PMID:19412162
GO_REF:0000024
NCBI chr 1:200,089,002...200,098,524
Ensembl chr 1:200,089,002...200,098,602
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Dgkz
diacylglycerol kinase zeta
involved_in
ISO
UniProtKB:P06400 (PMID:16286473)
RGD
PMID:16286473
NCBI chr 3:77,904,149...77,946,114
Ensembl chr 3:77,904,150...77,946,099
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Fbxo31
F-box protein 31
involved_in
ISS ISO
GO_REF:0000024 (PMID:19412162)
UniProt RGD
PMID:19412162
GO_REF:0000024
NCBI chr19:49,624,818...49,656,083
Ensembl chr19:49,627,686...49,656,010
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Gigyf2
GRB10 interacting GYF protein 2
acts_upstream_of_or_within
ISO
MGI:4126459 (MGI:4366664|PMID:19744960)
RGD
PMID:19744960
MGI:4366664
NCBI chr 9:88,001,212...88,127,040
Ensembl chr 9:88,001,301...88,125,715
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Prkdc
protein kinase, DNA-activated, catalytic subunit
involved_in
ISO
(PMID:21731742)
RGD
PMID:21731742
NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
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Rfwd3
ring finger and WD repeat domain 3
involved_in
ISO
(PMID:20173098)
RGD
PMID:20173098
NCBI chr19:39,235,883...39,268,536
Ensembl chr19:39,236,787...39,268,479
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Rpa2
replication protein A2
involved_in
ISO
(PMID:21731742)
RGD
PMID:21731742
NCBI chr 5:144,976,789...144,989,445
Ensembl chr 5:144,976,748...144,987,350
G
Rps27l
ribosomal protein S27-like
involved_in
ISO
(PMID:18056458)
RGD
PMID:18056458
NCBI chr 8:67,562,483...67,567,418
Ensembl chr 8:67,562,483...67,567,418
G
Sde2
SDE2 telomere maintenance homolog
involved_in
ISO IEA
(PMID:27906959) GO_REF:0000107
RGD Ensembl
PMID:27906959
GO_REF:0000107
NCBI chr13:92,578,843...92,595,142
Ensembl chr13:92,578,874...92,595,140
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Tp53
tumor protein p53
involved_in acts_upstream_of_or_within
ISO
(PMID:7958916) (MGI:3589512|PMID:16107883)
RGD
PMID:7958916 PMID:16107883
MGI:3589512
NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
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Trex1
three prime repair exonuclease 1
acts_upstream_of_or_within
ISO
MGI:3052754 (MGI:3818783|PMID:18045533), (MGI:5562498|PMID:23993650)
RGD
PMID:18045533 PMID:23993650
MGI:3818783 MGI:5562498
NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796
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Wac
WW domain containing adaptor with coiled-coil
involved_in
ISO
(PMID:21329877)
RGD
PMID:21329877
NCBI chr17:55,922,686...55,984,286
Ensembl chr17:55,923,123...55,982,301
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Abraxas1
abraxas 1, BRCA1 A complex subunit
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:17525340), (PMID:17643121), (PMID:19261748) GO_REF:0000107
UniProt RGD Ensembl
PMID:17525340 PMID:17643121 PMID:19261748
GO_REF:0000024 GO_REF:0000107
NCBI chr14:8,796,281...8,810,625
Ensembl chr14:8,796,266...8,810,622
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Atm
ATM serine/threonine kinase
involved_in
ISO
(PMID:15149599)
RGD
PMID:15149599
NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
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Babam1
BRISC and BRCA1 A complex member 1
involved_in
ISS IBA ISO
GO_REF:0000024 PMID:21873635 (PMID:19261746), (PMID:19261748), (PMID:19261749)
UniProt RGD
PMID:19261746 PMID:19261748 PMID:19261749 PMID:21873635
GO_REF:0000024, RGD:13792537
NCBI chr16:18,068,830...18,074,938
Ensembl chr16:18,068,884...18,074,923
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Babam2
BRISC and BRCA1 A complex member 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000104 (PMID:19261748)
UniProt RGD
PMID:19261748
GO_REF:0000024 GO_REF:0000104
NCBI chr 6:24,369,021...24,833,335
Ensembl chr 6:24,369,022...24,833,951
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Blm
BLM RecQ like helicase
involved_in
ISO
(PMID:11309417)
RGD
PMID:11309417
NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312
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Brca1
BRCA1, DNA repair associated
involved_in
ISO IEA
(PMID:17525340), (PMID:17643121), (PMID:19261748) GO_REF:0000107
RGD Ensembl
PMID:17525340 PMID:17643121 PMID:19261748
GO_REF:0000107
NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304
G
Brcc3
BRCA1/BRCA2-containing complex, subunit 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:17525341), (PMID:19261746), (PMID:19261748)
UniProt RGD
PMID:17525341 PMID:19261746 PMID:19261748
GO_REF:0000024
NCBI chr 9:1,986,942...1,989,484
Ensembl chr 9:1,986,575...1,991,080
G
Brcc3dc
BRCA1/BRCA2-containing complex, subunit 3, domain containing
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
NCBI chr 7:44,014,889...44,017,678
Ensembl chr 7:44,005,646...44,016,670
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Brsk1
BR serine/threonine kinase 1
involved_in
ISO
(PMID:15150265)
RGD
PMID:15150265
NCBI chr 1:69,134,166...69,159,947
Ensembl chr 1:69,134,565...69,160,365
G
Brsk2
BR serine/threonine kinase 2
involved_in
ISS
PMID:15150265
UniProt
PMID:15150265
RGD:8554801
NCBI chr 1:197,035,522...197,088,624
Ensembl chr 1:197,035,633...197,088,092
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Ccng1
cyclin G1
IMP
RGD
PMID:9464250
RGD:2316029
NCBI chr10:25,176,231...25,182,604
Ensembl chr10:25,176,234...25,181,641
G
Cdc14b
cell division cycle 14B
involved_in
ISO
(PMID:18662541)
RGD
PMID:18662541
NCBI chr17:844,731...934,787
Ensembl chr17:844,685...933,235
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Cdk1
cyclin-dependent kinase 1
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 (MGI:2679752|PMID:12937170)
RGD
PMID:12937170 PMID:21873635
MGI:2679752 , RGD:13792537
NCBI chr20:19,266,226...19,281,417
Ensembl chr20:19,266,248...19,281,408
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Cdk5rap3
CDK5 regulatory subunit associated protein 3
involved_in
ISO ISS
(PMID:15790566) GO_REF:0000024
RGD UniProt
PMID:15790566
GO_REF:0000024
NCBI chr10:81,894,393...81,903,581
Ensembl chr10:81,894,393...81,903,590
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Cdkn1a
cyclin-dependent kinase inhibitor 1A
involved_in
ISO
(PMID:23213251)
RGD
PMID:23213251
NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585
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Chek1
checkpoint kinase 1
involved_in
ISO
(PMID:20932473)
RGD
PMID:20932473
NCBI chr 8:36,420,565...36,443,477
Ensembl chr 8:36,420,569...36,441,009
G
Clspn
claspin
involved_in
ISO IBA
(PMID:18662541) PMID:21873635
RGD
PMID:18662541 PMID:21873635
RGD:13792537
NCBI chr 5:138,850,119...138,885,037
Ensembl chr 5:138,850,128...138,885,034
G
Donson
DNA replication fork stabilization factor DONSON
involved_in
ISO
(PMID:28191891)
RGD
PMID:28191891
NCBI chr11:30,911,616...30,933,150
Ensembl chr11:30,923,239...30,932,889
G
Dtl
denticleless E3 ubiquitin protein ligase homolog
involved_in
ISO IBA
(PMID:17085480) PMID:21873635
RGD
PMID:17085480 PMID:21873635
RGD:13792537
NCBI chr13:103,115,810...103,155,029
Ensembl chr13:103,117,186...103,154,890
G
Foxn3
forkhead box N3
involved_in
ISO
UniProtKB:P38111 (PMID:9154802)
RGD
PMID:9154802
NCBI chr 6:118,462,018...118,842,442
Ensembl chr 6:118,466,025...118,842,401
G
Foxo4
forkhead box O4
acts_upstream_of_or_within
ISO
(MGI:2183145|PMID:12048180)
RGD
PMID:12048180
MGI:2183145
NCBI chr X:66,385,241...66,392,115
Ensembl chr X:66,385,558...66,392,115
G
Fzr1
fizzy and cell division cycle 20 related 1
involved_in
ISO
(PMID:18662541)
RGD
PMID:18662541
NCBI chr 7:8,332,029...8,343,953
Ensembl chr 7:8,332,029...8,343,952
G
Hmga2
high mobility group AT-hook 2
involved_in
ISO
(PMID:16061642)
UniProt
PMID:16061642
NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
G
Ier3
immediate early response 3
acts_upstream_of_or_within
ISO
MGI:3773690 (MGI:5432078|PMID:20467439)
RGD
PMID:20467439
MGI:5432078
NCBI chr20:2,928,378...2,929,582
Ensembl chr20:2,928,378...2,929,583
G
LOC100302465
hypothetical LOC100302465
involved_in
ISO
(MGI:4455105|PMID:20154723)
RGD
PMID:20154723
MGI:4455105
NCBI chr 1:189,059,744...189,293,353
Ensembl chr 1:189,059,746...189,293,435
G
Mbd4
methyl-CpG binding domain 4 DNA glycosylase
acts_upstream_of_or_within
ISO
MGI:2684310 (MGI:2682526|PMID:14614141)
RGD
PMID:14614141
MGI:2682526
NCBI chr 4:148,893,049...148,904,833
Ensembl chr 4:148,894,280...148,904,982
G
Mre11
MRE11 homolog, double strand break repair nuclease
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000107 MGI:3027036 (MGI:2683367|PMID:14690604) PMID:21873635
Ensembl RGD
PMID:14690604 PMID:21873635
GO_REF:0000107 MGI:2683367 , RGD:13792537
NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279
G
Mrnip
MRN complex interacting protein
involved_in
ISO IBA
(PMID:27568553) PMID:21873635
RGD
PMID:27568553 PMID:21873635
RGD:13792537
NCBI chr10:34,501,359...34,525,474
Ensembl chr10:34,501,384...34,525,469
G
Nbn
nibrin
involved_in acts_upstream_of_or_within
IBA IEA ISO ISS
PMID:21873635 GO_REF:0000002 MGI:2183796 (MGI:3805397|PMID:18614044) GO_REF:0000107 GO_REF:0000024 (PMID:11438675)
InterPro RGD Ensembl UniProt
PMID:11438675 PMID:18614044 PMID:21873635
GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 MGI:3805397 , RGD:13792537
NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150
G
Nop53
NOP53 ribosome biogenesis factor
involved_in
ISO
(PMID:21741933)
RGD
PMID:21741933
NCBI chr 1:76,629,084...76,636,902
Ensembl chr 1:76,629,069...76,636,902
G
Plk1
polo-like kinase 1
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:18662541) GO_REF:0000024
Ensembl RGD UniProt
PMID:18662541
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:176,716,420...176,726,400
Ensembl chr 1:176,716,420...176,726,400
G
Rint1
RAD50 interactor 1
involved_in
ISO
(PMID:11096100)
RGD
PMID:11096100
NCBI chr 4:11,319,416...11,355,773
Ensembl chr 4:11,320,955...11,355,736
G
Syf2
SYF2 pre-mRNA-splicing factor
acts_upstream_of_or_within
ISO
MGI:3904866 (MGI:5435138|PMID:22448250)
RGD
PMID:22448250
MGI:5435138
NCBI chr 5:147,156,492...147,164,416
Ensembl chr 5:147,156,480...147,164,414
G
Taok1
TAO kinase 1
involved_in
ISO IEA ISS
(PMID:17396146) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:17396146
GO_REF:0000024 GO_REF:0000107
NCBI chr10:62,373,076...62,465,295
Ensembl chr10:62,381,404...62,465,766
G
Taok2
TAO kinase 2
involved_in
ISO IEA ISS
(PMID:17396146) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:17396146
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:181,475,708...181,494,738
Ensembl chr 1:181,475,711...181,494,613
G
Taok3
TAO kinase 3
involved_in
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (PMID:17396146)
Ensembl UniProt RGD
PMID:17396146
GO_REF:0000024 GO_REF:0000107
NCBI chr12:39,314,027...39,394,243
Ensembl chr12:39,314,027...39,461,244
G
Ticrr
TOPBP1-interacting checkpoint and replication regulator
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 1:133,597,618...133,639,513
Ensembl chr 1:133,597,716...133,639,523
G
Topbp1
DNA topoisomerase II binding protein 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 8:103,887,805...103,931,662
Ensembl chr 8:103,887,865...103,931,674
G
Trim39
tripartite motif-containing 39
involved_in
ISO IEA ISS
(PMID:23213251) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:23213251
GO_REF:0000024 GO_REF:0000107
NCBI chr20:2,003,320...2,017,175
Ensembl chr20:1,983,533...2,020,117
G
Uimc1
ubiquitin interaction motif containing 1
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:17525340), (PMID:17525341), (PMID:17525342), (PMID:17643121), (PMID:19261748) GO_REF:0000024
Ensembl RGD UniProt
PMID:17525340 PMID:17525341 PMID:17525342 PMID:17643121 PMID:19261748
GO_REF:0000024 GO_REF:0000107
NCBI chr17:9,523,793...9,592,810
Ensembl chr17:9,527,794...9,592,799
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Atf2
activating transcription factor 2
involved_in
ISO ISS
(PMID:15916964) GO_REF:0000024
RGD UniProt
PMID:15916964
GO_REF:0000024
NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
G
Chek2
checkpoint kinase 2
involved_in
ISO
(PMID:11298456)
RGD
PMID:11298456
NCBI chr12:45,788,823...45,821,382
Ensembl chr12:45,788,827...45,821,286
G
Eme1
essential meiotic structure-specific endonuclease 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr10:79,586,736...79,595,515
Ensembl chr10:79,586,729...79,595,435
G
Eme2
essential meiotic structure-specific endonuclease subunit 2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr10:13,913,216...13,915,991
Ensembl chr10:13,913,221...13,915,968
G
Fancd2
FA complementation group D2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:146,679,014...146,743,422
Ensembl chr 4:146,679,179...146,743,412
G
Hus1
HUS1 checkpoint clamp component
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr14:83,688,702...83,703,466
Ensembl chr14:83,688,708...83,703,442
G
Mre11
MRE11 homolog, double strand break repair nuclease
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000107 MGI:3027036 (MGI:2683367|PMID:14690604), (MGI:3805397|PMID:18614044) PMID:21873635
Ensembl RGD
PMID:14690604 PMID:18614044 PMID:21873635
GO_REF:0000107 MGI:2683367 MGI:3805397 , RGD:13792537
NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279
G
Msh2
mutS homolog 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:103557 (MGI:3512823|PMID:15533840)
Ensembl RGD
PMID:15533840
GO_REF:0000107 MGI:3512823
NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
G
Mus81
MUS81 structure-specific endonuclease subunit
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 1:202,790,295...202,796,008
Ensembl chr 1:202,790,466...202,795,843
G
Nek11
NIMA-related kinase 11
involved_in
ISO IBA
(PMID:15161910) PMID:21873635
RGD
PMID:15161910 PMID:21873635
RGD:13792537
NCBI chr 8:105,767,230...106,026,676
Ensembl chr 8:105,770,548...106,026,676
G
Rad17
RAD17 checkpoint clamp loader component
involved_in
ISO
(PMID:15538388)
RGD
PMID:15538388
NCBI chr 2:31,764,260...31,794,542
Ensembl chr 2:31,764,261...31,794,072
G
Rad9a
RAD9 checkpoint clamp component A
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 UniProtKB:P26306 (MGI:1289930|PMID:9766521)
RGD
PMID:9766521 PMID:21873635
MGI:1289930 , RGD:13792537
NCBI chr 1:201,488,511...201,553,582
Ensembl chr 1:201,487,136...201,553,608
G
Rad9b
RAD9 checkpoint clamp component B
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr12:34,217,868...34,248,380
Ensembl chr12:34,218,024...34,248,372
G
Tipin
timeless interacting protein
involved_in
ISS ISO
GO_REF:0000024 (PMID:17102137)
UniProt RGD
PMID:17102137
GO_REF:0000024
NCBI chr 8:64,780,741...64,801,355
Ensembl chr 8:64,780,828...64,801,352
G
Xpc
XPC complex subunit, DNA damage recognition and repair factor
acts_upstream_of_or_within
ISO
MGI:101816 (MGI:3512823|PMID:15533840)
RGD
PMID:15533840
MGI:3512823
NCBI chr 4:123,993,670...124,020,922
Ensembl chr 4:123,993,666...124,021,010
G
Brd4
bromodomain containing 4
involved_in
ISO
(PMID:23728299)
RGD
PMID:23728299
NCBI chr 7:11,216,446...11,296,029
Ensembl chr 7:11,216,446...11,295,539
G
Chek2
checkpoint kinase 2
IMP
RGD
PMID:20637979
RGD:10401658
NCBI chr12:45,788,823...45,821,382
Ensembl chr12:45,788,827...45,821,286
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Da2-19
uncharacterized LOC302729
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr X:44,820,693...44,837,935
Ensembl chr X:44,820,820...44,837,934
G
Ddx39b
DExD-box helicase 39B
involved_in
ISS ISO
GO_REF:0000024 (PMID:22144908)
UniProt RGD
PMID:22144908
GO_REF:0000024
NCBI chr20:3,547,702...3,585,064
Ensembl chr20:3,572,056...3,584,996
G
Thoc1
THO complex subunit 1
involved_in
ISO
(PMID:22144908)
RGD
PMID:22144908
NCBI chr18:983,606...1,020,379
Ensembl chr18:983,824...1,019,114
G
Thoc5
THO complex subunit 5
involved_in
ISS ISO
GO_REF:0000024 (PMID:22144908)
UniProt RGD
PMID:22144908
GO_REF:0000024
NCBI chr14:79,758,805...79,792,718
Ensembl chr14:79,758,917...79,792,718
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Ppp1r10
protein phosphatase 1, regulatory subunit 10
involved_in
ISO
UniProtKB:Q15554 (PMID:23426265)
RGD
PMID:23426265
NCBI chr20:2,822,995...2,838,125
Ensembl chr20:2,822,995...2,837,611
G
Ccar2
cell cycle and apoptosis regulator 2
involved_in
ISO
(PMID:23352644)
RGD
PMID:23352644
NCBI chr15:45,212,797...45,228,001
Ensembl chr15:45,212,803...45,227,636
G
Map3k20
mitogen-activated protein kinase kinase kinase 20
involved_in
ISO
(PMID:15342622)
RGD
PMID:15342622
NCBI chr 3:57,128,561...57,289,943
Ensembl chr 3:57,130,551...57,289,626
G
Cry1
cryptochrome circadian regulator 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5567851|PMID:24489120)
UniProt RGD
PMID:24489120
GO_REF:0000024 MGI:5567851
NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091
G
Cul4a
cullin 4A
acts_upstream_of_or_within
ISO
MGI:3851025 (MGI:3850765|PMID:19481525)
RGD
PMID:19481525
MGI:3850765
NCBI chr16:76,385,298...76,422,316
Ensembl chr16:76,384,546...76,422,330
G
Etaa1
ETAA1 activator of ATR kinase
involved_in
ISO IBA
(PMID:27723717), (PMID:27723720) PMID:21873635
RGD
PMID:27723717 PMID:27723720 PMID:21873635
RGD:13792537
Ensembl chr14:92,299,553...92,314,104
G
Etaa1l1
Ewing tumor-associated antigen 1-like 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr14:92,298,461...92,314,044
Ensembl chr14:92,299,553...92,314,104
G
Fbxo4
F-box protein 4
acts_upstream_of_or_within
ISO
MGI:5301830 (MGI:5299398|PMID:21911473)
RGD
PMID:21911473
MGI:5299398
NCBI chr 2:53,174,798...53,187,792
Ensembl chr 2:53,174,798...53,187,792
G
Fem1b
fem-1 homolog B
involved_in
ISS ISO
GO_REF:0000024 (PMID:19330022)
UniProt RGD
PMID:19330022
GO_REF:0000024
NCBI chr 8:63,265,301...63,278,577
Ensembl chr 8:63,265,301...63,278,577
G
Nek1
NIMA-related kinase 1
involved_in
ISO
(MGI:5619475|PMID:18843199)
RGD
PMID:18843199
MGI:5619475
NCBI chr16:28,998,229...29,125,426
Ensembl chr16:28,998,231...29,117,723
G
Rfwd3
ring finger and WD repeat domain 3
involved_in
ISO
(PMID:21504906)
RGD
PMID:21504906
NCBI chr19:39,235,883...39,268,536
Ensembl chr19:39,236,787...39,268,479
G
Rnaseh2b
ribonuclease H2, subunit B
acts_upstream_of_or_within
ISO
MGI:4432164 (MGI:5435090|PMID:22802351)
RGD
PMID:22802351
MGI:5435090
NCBI chr15:36,541,200...36,592,016
Ensembl chr15:36,541,218...36,584,118
G
Rpa2
replication protein A2
involved_in
ISO ISS
(PMID:21504906) GO_REF:0000024
RGD UniProt
PMID:21504906
GO_REF:0000024
NCBI chr 5:144,976,789...144,989,445
Ensembl chr 5:144,976,748...144,987,350
G
Wdr76
WD repeat domain 76
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 3:108,456,784...108,491,528
Ensembl chr 3:108,456,815...108,490,840
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all