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ONTOLOGY REPORT - ANNOTATIONS


Term:actin cytoskeleton reorganization
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Accession:GO:0031532 term browser browse the term
Definition:A process that is carried out at the cellular level which results in dynamic structural changes to the arrangement of constituent parts of cytoskeletal structures comprising actin filaments and their associated proteins.
Synonyms:exact_synonym: actin cytoskeleton remodeling;   actin cytoskeleton reorganisation
 alt_id: GO:0007012


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actin cytoskeleton reorganization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07027306.1 RGD:1600115
G Antxr1 ANTXR cell adhesion molecule 1 JBrowse link 4 118,946,267 119,131,202 RGD:1600115
RGD:1624291
G Anxa1 annexin A1 JBrowse link 1 237,893,983 237,910,002 RGD:1624291
RGD:13792537
RGD:1600115
G Atp2c1 ATPase secretory pathway Ca2+ transporting 1 JBrowse link 8 113,953,959 114,039,965 RGD:1600115
RGD:1624291
G Auts2 activator of transcription and developmental regulator AUTS2 JBrowse link 12 27,155,362 28,252,752 RGD:1624291
G Brsk2 BR serine/threonine kinase 2 JBrowse link 1 214,918,757 214,940,883 RGD:1624291
RGD:1600115
G Capn10 calpain 10 JBrowse link 9 100,104,000 100,112,833 RGD:1625052
RGD:1600115
RGD:1624291
G Cckar cholecystokinin A receptor JBrowse link 14 59,610,939 59,619,786 RGD:2313349
G Cdc42bpa CDC42 binding protein kinase alpha JBrowse link 13 98,231,326 98,447,762 RGD:632451
RGD:1624291
RGD:1600115
G Cdc42bpb CDC42 binding protein kinase beta JBrowse link 6 135,746,743 135,830,144 RGD:1600115
G Cdc42bpg CDC42 binding protein kinase gamma JBrowse link 1 221,673,334 221,693,518 RGD:1600115
G Cldn19 claudin 19 JBrowse link 5 138,300,692 138,307,982 RGD:1624291
G Cldn3 claudin 3 JBrowse link 12 21,831,341 21,832,813 RGD:1624291
G Cttn cortactin JBrowse link 1
1
217,602,698
215,255,385
217,638,196
215,290,882
RGD:10047281
G Cxadr CXADR, Ig-like cell adhesion molecule JBrowse link 11 16,826,269 16,873,564 RGD:1624291
RGD:1600115
G Dtnbp1 dystrobrevin binding protein 1 JBrowse link 17 20,090,136 20,182,332 RGD:1624291
RGD:1600115
G Eps8 epidermal growth factor receptor pathway substrate 8 JBrowse link 4 171,475,155 171,645,620 RGD:1624291
G Ezr ezrin JBrowse link 1 47,287,872 47,331,412 RGD:1624291
G Farp2 FERM, ARH/RhoGEF and pleckstrin domain protein 2 JBrowse link 9 100,660,366 100,767,940 RGD:1624291
G Fer FER tyrosine kinase JBrowse link 9 111,557,804 111,868,583 RGD:1600115
RGD:1624291
G Fgf10 fibroblast growth factor 10 JBrowse link 2 51,673,480 51,747,533 RGD:1624291
G Fgf7 fibroblast growth factor 7 JBrowse link 3 118,315,859 118,368,464 RGD:1600115
RGD:1624291
G Flna filamin A JBrowse link X 156,460,785 156,487,245 RGD:1624291
G Gab1 GRB2-associated binding protein 1 JBrowse link 19 30,794,290 30,903,819 RGD:1624291
G Gpr65 G-protein coupled receptor 65 JBrowse link 6 122,248,528 122,256,115 RGD:1624291
G Hmgb1 high mobility group box 1 JBrowse link 12 7,082,529 7,090,246 RGD:2316828
G Insrr insulin receptor-related receptor JBrowse link 2 187,161,817 187,181,400 RGD:1624291
RGD:1600115
G Kit KIT proto-oncogene receptor tyrosine kinase JBrowse link 14 35,072,131 35,149,638 RGD:1624291
G Lpin1 lipin 1 JBrowse link 6 41,796,214 41,905,149 RGD:1624291
G Micall2 MICAL-like 2 JBrowse link 12 16,988,013 17,016,794 RGD:1624291
RGD:1600115
G Mink1 misshapen-like kinase 1 JBrowse link 10 57,185,310 57,238,531 RGD:1600115
RGD:13792537
RGD:1624291
G Mkln1 muskelin 1 JBrowse link 4 58,693,384 58,817,924 RGD:1600115
RGD:1624291
G Myh9 myosin, heavy chain 9 JBrowse link 7 118,740,005 118,792,507 RGD:12798521
RGD:1624291
G Myh9l1 myosin heavy chain 9-like 1 JBrowse link 7 118,991,251 119,071,722 RGD:1600115
G Nphs2 NPHS2 stomatin family member, podocin JBrowse link 13 73,929,136 73,941,522 RGD:1624291
G Nrk Nik related kinase JBrowse link X
X
109,940,439
110,065,199
110,036,361
110,089,124
RGD:13792537
G Nrp1 neuropilin 1 JBrowse link 19 61,332,351 61,486,166 RGD:1624291
G Pak1 p21 (RAC1) activated kinase 1 JBrowse link 1 162,768,156 162,883,356 RGD:1600115
RGD:1624291
G Parva parvin, alpha JBrowse link 1 177,249,302 177,408,160 RGD:1600115
RGD:13792537
G Parvb parvin, beta JBrowse link 7 125,189,827 125,275,977 RGD:1624291
RGD:13792537
G Parvg parvin, gamma JBrowse link 7 125,288,081 125,307,587 RGD:13792537
G Pdlim4 PDZ and LIM domain 4 JBrowse link 10 39,390,578 39,405,322 RGD:1600115
RGD:1624291
G Phactr1 phosphatase and actin regulator 1 JBrowse link 17 23,245,423 23,761,207 RGD:1624291
RGD:1600115
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase, type 1, alpha JBrowse link 2 196,227,669 196,270,949 RGD:1624291
G Plek pleckstrin JBrowse link 14 100,151,518 100,184,192 RGD:1624291
RGD:13792537
G Plek2 pleckstrin 2 JBrowse link 6 102,076,736 102,095,002 RGD:1624291
RGD:13792537
G Ptk7 protein tyrosine kinase 7 JBrowse link 9 16,662,588 16,729,888 RGD:1624291
G Ptpn1 protein tyrosine phosphatase, non-receptor type 1 JBrowse link 3 164,665,462 164,711,936 RGD:1624291
RGD:1600115
G Rala RAS like proto-oncogene A JBrowse link 17 49,676,073 49,729,133 RGD:1624291
G Rap2a RAP2A, member of RAS oncogene family JBrowse link 15 105,851,543 105,852,033 RGD:1624291
RGD:1600115
G Rhoa ras homolog family member A JBrowse link 8 117,082,440 117,116,244 RGD:1624291
RGD:1600115
G Rictor RPTOR independent companion of MTOR, complex 2 JBrowse link 2 56,013,898 56,105,818 RGD:1624291
RGD:13792537
G S100a9 S100 calcium binding protein A9 JBrowse link 2 190,097,436 190,100,209 RGD:1624291
G S1pr1 sphingosine-1-phosphate receptor 1 JBrowse link 2 218,654,406 218,658,761 RGD:1624291
RGD:1600115
G S1pr2 sphingosine-1-phosphate receptor 2 JBrowse link 8 21,984,914 21,995,806 RGD:1624291
G Shc1 SHC adaptor protein 1 JBrowse link 2 188,745,503 188,757,066 RGD:1624291
RGD:1600115
G Sipa1l1 signal-induced proliferation-associated 1 like 1 JBrowse link 6 106,052,212 106,163,249 RGD:8554032
RGD:1600115
G Smap1 small ArfGAP 1 JBrowse link 9 30,068,888 30,161,753 RGD:1624291
G Sptan1 spectrin, alpha, non-erythrocytic 1 JBrowse link 3 8,534,437 8,599,259 RGD:2306291
G Syde1 synapse defective Rho GTPase homolog 1 JBrowse link 7 14,037,646 14,043,632 RGD:1600115
RGD:1624291
G Thsd7a thrombospondin type 1 domain containing 7A JBrowse link 4 38,658,512 39,103,411 RGD:1624291
RGD:13792537
G Thsd7b thrombospondin type 1 domain containing 7B JBrowse link 13 46,026,943 46,931,619 RGD:13792537
G Tnik TRAF2 and NCK interacting kinase JBrowse link 2 113,984,599 114,391,805 RGD:1624291
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 JBrowse link 12 47,698,915 47,737,902 RGD:8553293
actin filament reorganization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcar1 BCAR1 scaffold protein, Cas family member JBrowse link 19 43,932,543 43,967,452 RGD:13792537
G Cass4 Cas scaffold protein family member 4 JBrowse link 3 170,398,496 170,438,381 RGD:13792537
G Dmtn dematin actin binding protein JBrowse link 15 52,292,762 52,320,385 RGD:1624291
G Efs embryonal Fyn-associated substrate JBrowse link 15 33,579,952 33,590,217 RGD:13792537
G Gdpd2 glycerophosphodiester phosphodiesterase domain containing 2 JBrowse link X 70,563,381 70,572,295 RGD:1624291
G Gsn gelsolin JBrowse link 3 14,456,106 14,508,922 RGD:1624291
G Mcu mitochondrial calcium uniporter JBrowse link 20 29,037,452 29,199,224 RGD:1600115
RGD:1624291
G Nedd9 neural precursor cell expressed, developmentally down-regulated 9 JBrowse link 17 22,984,792 23,179,701 RGD:13792537
G Whamm WASP homolog associated with actin, golgi membranes and microtubules JBrowse link 1 143,401,986 143,430,356 RGD:1624291
negative regulation of actin cytoskeleton reorganization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tjp1 tight junction protein 1 JBrowse link 1 126,146,489 126,515,359 RGD:1624291
positive regulation of actin cytoskeleton reorganization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase JBrowse link 3 10,041,820 10,145,076 RGD:1624291
G Actr3 actin related protein 3 JBrowse link 13 41,695,520 41,738,622 RGD:10054052
G Arpc2 actin related protein 2/3 complex, subunit 2 JBrowse link 9 81,518,163 81,548,871 RGD:10054052
G Baiap2 BAR/IMD domain containing adaptor protein 2 JBrowse link 10 109,107,326 109,187,458 RGD:13792537
G Baiap2l1 BAI1-associated protein 2-like 1 JBrowse link 12 12,226,967 12,321,172 RGD:1624291
RGD:13792537
RGD:1600115
G Baiap2l2 BAI1-associated protein 2-like 2 JBrowse link 7 120,492,366 120,518,803 RGD:13792537
G Bcas3 BCAS3, microtubule associated cell migration factor JBrowse link 10 72,756,548 73,271,851 RGD:1624291
G Ccl27 C-C motif chemokine ligand 27 JBrowse link 5 58,159,066 58,166,182 RGD:1624291
RGD:13792537
G Cdc42 cell division cycle 42 JBrowse link 5 155,690,267 155,728,385 RGD:1624291
G Csf3 colony stimulating factor 3 JBrowse link 10 86,616,785 86,619,160 RGD:1624291
G Fes FES proto-oncogene, tyrosine kinase JBrowse link 1 142,174,648 142,183,884 RGD:1624291
G Hax1 HCLS1 associated protein X-1 JBrowse link 2 189,330,900 189,333,305 RGD:1624291
RGD:1600115
G Hck HCK proto-oncogene, Src family tyrosine kinase JBrowse link 3 148,579,917 148,623,026 RGD:1600115
RGD:1624291
G Hras HRas proto-oncogene, GTPase JBrowse link 1 214,178,404 214,181,841 RGD:1624291
G Nrp1 neuropilin 1 JBrowse link 19 61,332,351 61,486,166 RGD:1624291
G Ntf3 neurotrophin 3 JBrowse link 4 158,636,883 158,705,886 RGD:1624291
RGD:1600115
G Ntrk3 neurotrophic receptor tyrosine kinase 3 JBrowse link 1 139,890,537 140,262,503 RGD:1624291
G Rapgef3 Rap guanine nucleotide exchange factor 3 JBrowse link 7 139,232,263 139,254,668 RGD:9835356
G Stap1 signal transducing adaptor family member 1 JBrowse link 14 23,575,400 23,604,984 RGD:1624291
G Tek TEK receptor tyrosine kinase JBrowse link 5 113,725,717 113,852,799 RGD:1624291
regulation of actin cytoskeleton reorganization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arhgdia Rho GDP dissociation inhibitor alpha JBrowse link 10 109,754,012 109,757,506 RGD:1624291
G Arhgdib Rho GDP dissociation inhibitor beta JBrowse link 4 170,913,920 170,932,789 RGD:1624291
G Cd2ap CD2-associated protein JBrowse link 9 20,794,680 20,858,438 RGD:1624291
G Csf1r colony stimulating factor 1 receptor JBrowse link 18 56,414,493 56,458,300 RGD:1600115
RGD:1624291
G Ctsl cathepsin L JBrowse link 17 1,873,105 1,879,266 RGD:1624291
G Dapk3 death-associated protein kinase 3 JBrowse link 7 11,392,436 11,400,855 RGD:1624291
G Esam endothelial cell adhesion molecule JBrowse link 8 39,997,875 40,008,802 RGD:1624291
G F11r F11 receptor JBrowse link 13 89,826,272 89,850,151 RGD:1624291
G Gmfg glia maturation factor, gamma JBrowse link 1 85,312,473 85,322,860 RGD:1600115
G Mdk midkine JBrowse link 3 80,841,003 80,843,895 RGD:1600115
RGD:1624291
G Notch2 notch receptor 2 JBrowse link 2 200,187,184 200,320,403 RGD:1600115
RGD:1624291
G Phpt1 phosphohistidine phosphatase 1 JBrowse link 3 2,797,037 2,798,436 RGD:1624291
G Ptk2b protein tyrosine kinase 2 beta JBrowse link 15 42,827,306 42,947,796 RGD:1600115
RGD:1624291
G Rapgef3 Rap guanine nucleotide exchange factor 3 JBrowse link 7 139,232,263 139,254,668 RGD:1624291
RGD:1600115
G Rhod ras homolog family member D JBrowse link 1 219,668,352 219,682,287 RGD:1624291
G Sema3e semaphorin 3E JBrowse link 4 17,314,745 17,594,659 RGD:1624291
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:1624291
G Trpm2 transient receptor potential cation channel, subfamily M, member 2 JBrowse link 20 11,434,062 11,482,880 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19439
    cellular process 18178
      actin filament-based process 806
        actin cytoskeleton organization 720
          actin cytoskeleton reorganization 110
            actin filament reorganization + 9
            negative regulation of actin cytoskeleton reorganization 1
            positive regulation of actin cytoskeleton reorganization 20
            regulation of actin cytoskeleton reorganization + 38
Path 2
Term Annotations click to browse term
  biological_process 19439
    cellular process 18178
      cellular component organization or biogenesis 6367
        cellular component organization 6145
          organelle organization 3857
            cytoskeleton organization 1417
              actin cytoskeleton organization 720
                actin cytoskeleton reorganization 110
                  actin filament reorganization + 9
                  negative regulation of actin cytoskeleton reorganization 1
                  positive regulation of actin cytoskeleton reorganization 20
                  regulation of actin cytoskeleton reorganization + 38
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.