Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:actin cytoskeleton reorganization
go back to main search page
Accession:GO:0031532 term browser browse the term
Definition:A process that is carried out at the cellular level which results in dynamic structural changes to the arrangement of constituent parts of cytoskeletal structures comprising actin filaments and their associated proteins.
Synonyms:exact_synonym: actin cytoskeleton remodeling;   actin cytoskeleton reorganisation
 alt_id: GO:0007012


show annotations for term's descendants           Sort by:
actin cytoskeleton reorganization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Antxr1 ANTXR cell adhesion molecule 1 involved_in ISO
IEA		 (PMID:16762926)
GO_REF:0000107		 RGD
Ensembl		 PMID:16762926 GO_REF:0000107 NCBI chr 4:119,590,770...119,778,232
Ensembl chr 4:119,590,771...119,778,232 		JBrowse link
G Anxa1 annexin A1 involved_in ISS
IBA
ISO		 GO_REF:0000024
PMID:21873635
(PMID:15187149)		 UniProt
RGD		 PMID:15187149 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343 		JBrowse link
G Asb2 ankyrin repeat and SOCS box-containing 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:6718235|PMID:29374072)		 UniProt
RGD		 PMID:29374072 GO_REF:0000024 MGI:6718235 NCBI chr 6:122,474,754...122,511,014
Ensembl chr 6:122,474,756...122,510,854 		JBrowse link
G Atp2c1 ATPase secretory pathway Ca2+ transporting 1 involved_in ISO
ISS		 (PMID:14632182)
GO_REF:0000024		 RGD
UniProt		 PMID:14632182 GO_REF:0000024 NCBI chr 8:106,034,777...106,155,854
Ensembl chr 8:106,034,636...106,156,006 		JBrowse link
G Auts2 activator of transcription and developmental regulator AUTS2 involved_in ISO (MGI:5908783|PMID:25533347) RGD PMID:25533347 MGI:5908783 NCBI chr12:24,104,187...25,194,123
Ensembl chr12:24,104,192...25,194,416 		JBrowse link
G Brsk2 BR serine/threonine kinase 2 involved_in ISO
IEA		 (PMID:22669945)
GO_REF:0000107		 RGD
Ensembl		 PMID:22669945 GO_REF:0000107 NCBI chr 1:197,035,522...197,088,624
Ensembl chr 1:197,035,633...197,088,092 		JBrowse link
G Capn10 calpain 10 involved_in IMP
ISO
IEA		 (MGI:3777524|PMID:12974673)
GO_REF:0000107		 RGD
Ensembl		 PMID:12974673 PMID:17150188 GO_REF:0000107 MGI:3777524, RGD:1625052 NCBI chr 9:93,498,132...93,510,494
Ensembl chr 9:93,498,478...93,510,494 		JBrowse link
G Cckar cholecystokinin A receptor IDA RGD PMID:11891013 RGD:2313349 NCBI chr14:57,292,397...57,300,747
Ensembl chr14:57,292,397...57,300,747 		JBrowse link
G Cdc42bpa CDC42 binding protein kinase alpha involved_in IDA
ISO		 PMID:9418861
(PMID:9418861)		 RGD PMID:9418861 PMID:9418861 RGD:632451 NCBI chr13:91,683,775...91,903,732
Ensembl chr13:91,684,007...91,903,732 		JBrowse link
G Cdc42bpb CDC42 binding protein kinase beta involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 6:130,333,712...130,416,631
Ensembl chr 6:130,333,712...130,416,377 		JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO MGI:1857282 (MGI:3766155|PMID:17507657) RGD PMID:17507657 MGI:3766155 NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775 		JBrowse link
G Cldn19 claudin 19 involved_in ISO (PMID:27593915) RGD PMID:27593915 NCBI chr 5:132,862,939...132,870,364
Ensembl chr 5:132,863,267...132,868,227 		JBrowse link
G Cldn3 claudin 3 involved_in ISO (PMID:27593915) RGD PMID:27593915 NCBI chr12:21,708,538...21,710,010
Ensembl chr12:21,708,398...21,711,001 		JBrowse link
G Cttn cortactin involved_in IMP PMID:18768925 UniProt PMID:18768925 RGD:10047281 NCBI chr 1:199,599,710...199,635,254
Ensembl chr 1:199,599,710...199,635,164 		JBrowse link
G Cxadr CXADR, Ig-like cell adhesion molecule involved_in ISS
ISO		 GO_REF:0000024
(PMID:17675666)		 UniProt
RGD		 PMID:17675666 GO_REF:0000024 NCBI chr11:16,982,752...17,030,078
Ensembl chr11:16,982,860...17,030,046 		JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 involved_in ISO
ISS		 (MGI:3690250|PMID:16980328)
GO_REF:0000024		 RGD
UniProt		 PMID:16980328 GO_REF:0000024 MGI:3690250 NCBI chr17:19,685,218...19,776,668
Ensembl chr17:19,685,215...19,776,661 		JBrowse link
G Eps8 epidermal growth factor receptor pathway substrate 8 acts_upstream_of_or_within ISO MGI:3693626 (MGI:3692803|PMID:17018287) RGD PMID:17018287 MGI:3692803 NCBI chr 4:170,388,378...170,486,873
Ensembl chr 4:170,388,378...170,486,873 		JBrowse link
G Ezr ezrin involved_in ISO (PMID:23106337) RGD PMID:23106337 NCBI chr 1:46,967,961...47,011,505
Ensembl chr 1:46,967,658...47,011,505 		JBrowse link
G Farp2 FERM, ARH/RhoGEF and pleckstrin domain protein 2 involved_in ISO (MGI:4844210|PMID:20702777) RGD PMID:20702777 MGI:4844210 NCBI chr 9:94,053,650...94,162,212
Ensembl chr 9:94,053,726...94,162,212 		JBrowse link
G Fer FER tyrosine kinase involved_in ISS
ISO		 GO_REF:0000024
(MGI:3620305|PMID:16176974)		 UniProt
RGD		 PMID:16176974 GO_REF:0000024 MGI:3620305 NCBI chr 9:103,520,452...103,827,364
Ensembl chr 9:103,520,493...103,821,451 		JBrowse link
G Fgf10 fibroblast growth factor 10 involved_in ISO (PMID:17449030) RGD PMID:17449030 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Fgf7 fibroblast growth factor 7 involved_in ISO
IEA		 (PMID:17449030)
GO_REF:0000107		 RGD
Ensembl		 PMID:17449030 GO_REF:0000107 NCBI chr 3:113,280,448...113,333,279
Ensembl chr 3:113,281,283...113,332,929 		JBrowse link
G Flna filamin A involved_in ISO (PMID:10051605) RGD PMID:10051605 NCBI chr  X:152,007,758...152,034,266
Ensembl chr  X:152,007,758...152,031,052 		JBrowse link
G Fmn2 formin 2 involved_in ISO (PMID:24223803) RGD PMID:24223803 NCBI chr13:86,454,256...86,771,437
Ensembl chr13:86,453,926...86,771,411 		JBrowse link
G Fmnl3 formin-like 3 involved_in ISO (PMID:24223803) RGD PMID:24223803 NCBI chr 7:130,454,270...130,505,621
Ensembl chr 7:130,454,275...130,505,626 		JBrowse link
G Gab1 GRB2-associated binding protein 1 involved_in ISO (PMID:17178724) RGD PMID:17178724 NCBI chr19:27,131,262...27,239,236
Ensembl chr19:27,131,262...27,239,236 		JBrowse link
G Gpr65 G-protein coupled receptor 65 involved_in ISO (PMID:15618224) RGD PMID:15618224 NCBI chr 6:117,515,786...117,536,514
Ensembl chr 6:117,515,648...117,536,512 		JBrowse link
G Grb2 growth factor receptor bound protein 2 acts_upstream_of_or_within ISO (PMID:8253073) RGD PMID:8253073 NCBI chr10:100,881,404...100,949,193
Ensembl chr10:100,869,718...100,949,309 		JBrowse link
G Hmgb1 high mobility group box 1 IMP RGD PMID:11257120 RGD:2316828 NCBI chr12:5,973,062...5,978,565
Ensembl chr12:5,901,586...5,978,565 		JBrowse link
G Insrr insulin receptor-related receptor involved_in ISS
ISO		 GO_REF:0000024
(PMID:21641549)		 UniProt
RGD		 PMID:21641549 GO_REF:0000024 NCBI chr 2:173,255,335...173,274,800
Ensembl chr 2:173,255,414...173,274,800 		JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase involved_in ISO (PMID:1721869) RGD PMID:1721869 NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652 		JBrowse link
G Lpin1 lipin 1 acts_upstream_of_or_within ISO MGI:1856603 (MGI:1095561|PMID:10438476) RGD PMID:10438476 MGI:1095561 NCBI chr 6:39,309,198...39,417,034
Ensembl chr 6:39,312,748...39,417,097 		JBrowse link
G Micall2 MICAL-like 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5514064|PMID:23890175)		 UniProt
Ensembl
RGD		 PMID:23890175 GO_REF:0000024 GO_REF:0000107 MGI:5514064 NCBI chr12:14,899,151...14,927,949
Ensembl chr12:14,899,157...14,927,946 		JBrowse link
G Mink1 misshapen-like kinase 1 involved_in IEA
IBA
ISO		 GO_REF:0000107
PMID:21873635
(PMID:15469942)		 Ensembl
RGD		 PMID:15469942 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr10:55,278,293...55,330,782
Ensembl chr10:55,278,391...55,330,782 		JBrowse link
G Mkln1 muskelin 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:1351271|PMID:9724633), (MGI:3806927|PMID:18710924)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:9724633 PMID:18710924 GO_REF:0000024 GO_REF:0000107 MGI:1351271 MGI:3806927 NCBI chr 4:59,815,912...60,124,047
Ensembl chr 4:60,002,464...60,123,993 		JBrowse link
G Myh9 myosin, heavy chain 9 involved_in IMP
ISS
ISO		 GO_REF:0000024
(PMID:15869600)		 UniProt
RGD		 PMID:15869600 PMID:23354122 GO_REF:0000024, RGD:12798521 NCBI chr 7:109,343,718...109,424,457
Ensembl chr 7:109,343,706...109,424,457 		JBrowse link
G Nphs2 NPHS2 stomatin family member, podocin involved_in ISO (PMID:17675666) RGD PMID:17675666 NCBI chr13:68,448,720...68,461,312
Ensembl chr13:68,448,926...68,461,313 		JBrowse link
G Nrk Nik related kinase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:102,365,747...102,462,957
Ensembl chr  X:102,365,765...102,459,657 		JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (PMID:24863063) RGD PMID:24863063 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633 		JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:27917469)
(PMID:16278681), (PMID:9395435)		 UniProt
RGD		 PMID:9395435 PMID:16278681 PMID:27917469 GO_REF:0000024 NCBI chr 1:152,111,172...152,226,390
Ensembl chr 1:152,111,188...152,226,383 		JBrowse link
G Parva parvin, alpha involved_in IBA
IEA		 PMID:21873635
GO_REF:0000002		 InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 1:166,547,202...166,704,958
Ensembl chr 1:166,547,132...166,704,950 		JBrowse link
G Parvb parvin, beta involved_in ISO
IBA		 (PMID:15005707)
PMID:21873635		 RGD PMID:15005707 PMID:21873635 RGD:13792537 NCBI chr 7:115,360,254...115,445,767
Ensembl chr 7:115,360,261...115,445,766 		JBrowse link
G Parvg parvin, gamma involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:115,456,183...115,475,707
Ensembl chr 7:115,456,209...115,475,104 		JBrowse link
G Pdlim4 PDZ and LIM domain 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:21636573)		 Ensembl
RGD		 PMID:21636573 GO_REF:0000107 NCBI chr10:38,198,686...38,212,935
Ensembl chr10:38,198,689...38,212,938 		JBrowse link
G Phactr1 phosphatase and actin regulator 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5487491|PMID:22976292)		 UniProt
RGD		 PMID:22976292 GO_REF:0000024 MGI:5487491 NCBI chr17:21,560,364...22,040,166
Ensembl chr17:21,562,721...22,039,831 		JBrowse link
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase, type 1, alpha involved_in ISO (PMID:20660631) RGD PMID:20660631 NCBI chr 2:182,628,299...182,671,584
Ensembl chr 2:182,628,300...182,671,598 		JBrowse link
G Plec plectin involved_in ISO (MGI:1313095|PMID:9808630) RGD PMID:9808630 MGI:1313095 NCBI chr 7:107,887,764...107,949,100
Ensembl chr 7:107,887,764...107,945,467 		JBrowse link
G Plek pleckstrin involved_in ISO
IBA		 (PMID:10497244)
PMID:21873635		 RGD PMID:10497244 PMID:21873635 RGD:13792537 NCBI chr14:91,397,015...91,429,693
Ensembl chr14:91,397,019...91,454,131 		JBrowse link
G Plek2 pleckstrin 2 involved_in IBA
ISO		 PMID:21873635
(MGI:5902431|PMID:17008542)		 RGD PMID:17008542 PMID:21873635 MGI:5902431, RGD:13792537 NCBI chr 6:97,700,123...97,719,417
Ensembl chr 6:97,701,106...97,719,326 		JBrowse link
G Ptk7 protein tyrosine kinase 7 involved_in ISO (PMID:20837484) RGD PMID:20837484 NCBI chr 9:14,352,155...14,418,494
Ensembl chr 9:14,351,202...14,418,494 		JBrowse link
G Ptpn1 protein tyrosine phosphatase, non-receptor type 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21135139)		 UniProt
RGD		 PMID:21135139 GO_REF:0000024 NCBI chr 3:156,638,811...156,687,503
Ensembl chr 3:156,638,769...156,687,504 		JBrowse link
G Rala RAS like proto-oncogene A involved_in ISO (PMID:10051605) RGD PMID:10051605 NCBI chr17:47,092,139...47,145,192
Ensembl chr17:47,092,207...47,144,063 		JBrowse link
G Rap2a RAP2A, member of RAS oncogene family involved_in ISO (PMID:15342639) RGD PMID:15342639 NCBI chr15:97,596,848...97,597,338
Ensembl chr15:97,596,020...97,624,138 		JBrowse link
G Rhoa ras homolog family member A involved_in ISO
ISS		 (PMID:19782033)
GO_REF:0000024		 RGD
UniProt		 PMID:19782033 GO_REF:0000024 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746 		JBrowse link
G Rictor RPTOR independent companion of MTOR, complex 2 involved_in ISO (PMID:15268862) RGD PMID:15268862 NCBI chr 2:55,811,877...55,903,893
Ensembl chr 2:55,811,322...55,901,426 		JBrowse link
G S100a9 S100 calcium binding protein A9 acts_upstream_of_or_within ISO MGI:2450165 (MGI:2449751|PMID:12529407) RGD PMID:12529407 MGI:2449751 NCBI chr 2:176,190,361...176,193,182
Ensembl chr 2:176,190,361...176,193,230 		JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3703727|PMID:11726541)		 UniProt
RGD		 PMID:11726541 GO_REF:0000024 MGI:3703727 NCBI chr 2:203,624,752...203,629,110
Ensembl chr 2:203,621,587...203,629,681 		JBrowse link
G S1pr2 sphingosine-1-phosphate receptor 2 involved_in ISO (PMID:23106337) RGD PMID:23106337 NCBI chr 8:19,503,276...19,514,169
Ensembl chr 8:19,502,627...19,523,574 		JBrowse link
G Shc1 SHC adaptor protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2384189 (MGI:1858547|PMID:10809671)		 Ensembl
RGD		 PMID:10809671 GO_REF:0000107 MGI:1858547 NCBI chr 2:174,837,937...174,849,538
Ensembl chr 2:174,837,930...174,849,536 		JBrowse link
G Sipa1l1 signal-induced proliferation-associated 1 like 1 involved_in IDA PMID:11502259 UniProt PMID:11502259 RGD:8554032 NCBI chr 6:101,839,351...102,118,408
Ensembl chr 6:101,839,404...102,116,950 		JBrowse link
G Smap1 small ArfGAP 1 NOT|acts_upstream_of_or_within ISO (MGI:3581491|PMID:15659652) RGD PMID:15659652 MGI:3581491 NCBI chr 9:26,250,178...26,342,151
Ensembl chr 9:26,249,978...26,342,170 		JBrowse link
G Sptan1 spectrin, alpha, non-erythrocytic 1 IMP RGD PMID:16870704 RGD:2306291 NCBI chr 3:13,241,164...13,306,047
Ensembl chr 3:13,241,217...13,306,046 		JBrowse link
G Syde1 synapse defective Rho GTPase homolog 1 acts_upstream_of_or_within ISO (PMID:27917469) RGD PMID:27917469 NCBI chr 7:11,032,931...11,038,917
Ensembl chr 7:11,032,898...11,039,869 		JBrowse link
G Thsd7a thrombospondin type 1 domain containing 7A involved_in IBA
ISO		 PMID:21873635
(MGI:6154547|PMID:27214550)		 RGD PMID:27214550 PMID:21873635 MGI:6154547, RGD:13792537 NCBI chr 4:40,461,124...40,899,345
Ensembl chr 4:40,460,814...40,899,583 		JBrowse link
G Thsd7b thrombospondin type 1 domain containing 7B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:40,768,567...41,667,262
Ensembl chr13:40,768,570...41,666,501 		JBrowse link
G Tnik TRAF2 and NCK interacting kinase involved_in ISO (PMID:15342639) RGD PMID:15342639 NCBI chr 2:111,184,352...111,587,993
Ensembl chr 2:111,184,387...111,580,750 		JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 involved_in IDA PMID:20657843 BHF-UCL PMID:20657843 RGD:8553293 NCBI chr12:41,938,533...41,977,517
Ensembl chr12:41,938,560...41,977,517 		JBrowse link
actin filament reorganization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcar1 BCAR1 scaffold protein, Cas family member involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:39,679,218...39,713,952
Ensembl chr19:39,679,204...39,713,907 		JBrowse link
G Cass4 Cas scaffold protein family member 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:161,162,520...161,202,523
Ensembl chr 3:161,163,436...161,202,186 		JBrowse link
G Dmtn dematin actin binding protein involved_in ISO (MGI:5465511|PMID:23060452) RGD PMID:23060452 MGI:5465511 NCBI chr15:45,677,974...45,705,601
Ensembl chr15:45,677,977...45,705,601 		JBrowse link
G Efs embryonal Fyn-associated substrate involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:28,392,417...28,403,016
Ensembl chr15:28,392,187...28,401,902 		JBrowse link
G Gdpd2 glycerophosphodiester phosphodiesterase domain containing 2 acts_upstream_of_or_within ISO (MGI:2679742|PMID:12933806) RGD PMID:12933806 MGI:2679742 NCBI chr  X:65,826,273...65,835,361
Ensembl chr  X:65,826,574...65,835,361 		JBrowse link
G Gsn gelsolin involved_in ISO UniProtKB:P04578 (PMID:23575248) RGD PMID:23575248 NCBI chr 3:18,585,166...18,638,404
Ensembl chr 3:18,585,172...18,638,402 		JBrowse link
G Hmcn1 hemicentin 1 involved_in ISO (PMID:29488390) RGD PMID:29488390 NCBI chr13:62,615,461...63,084,524
Ensembl chr13:62,615,461...63,084,524 		JBrowse link
G Mcu mitochondrial calcium uniporter involved_in ISO (PMID:28388446) RGD PMID:28388446 NCBI chr20:27,417,529...27,580,110
Ensembl chr20:27,417,526...27,580,110 		JBrowse link
G Nedd9 neural precursor cell expressed, developmentally down-regulated 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:23,289,793...23,468,026
Ensembl chr17:23,282,326...23,468,019 		JBrowse link
G Whamm WASP homolog associated with actin, golgi membranes and microtubules involved_in ISO (PMID:23087206) RGD PMID:23087206 NCBI chr 1:135,526,363...135,557,091
Ensembl chr 1:135,526,386...135,554,759 		JBrowse link
negative regulation of actin cytoskeleton reorganization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tjp1 tight junction protein 1 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr 1:118,849,838...119,094,492
Ensembl chr 1:118,849,838...119,094,432 		JBrowse link
positive regulation of actin cytoskeleton reorganization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO (PMID:24863063) RGD PMID:24863063 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065 		JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:105,223,065...105,290,130
Ensembl chr10:105,223,090...105,290,134 		JBrowse link
G Baiap2l1 BAR/IMD domain containing adaptor protein 2 like 1 involved_in ISO
IBA
ISS		 (PMID:19366662)
PMID:21873635
GO_REF:0000024		 RGD
UniProt		 PMID:19366662 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr12:10,250,434...10,339,937
Ensembl chr12:10,250,473...10,339,928 		JBrowse link
G Baiap2l2 BAR/IMD domain containing adaptor protein 2 like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:110,824,370...110,850,702
Ensembl chr 7:110,824,375...110,850,702 		JBrowse link
G Bcas3 BCAS3, microtubule associated cell migration factor involved_in ISO (MGI:5582152|PMID:22300583) RGD PMID:22300583 MGI:5582152 NCBI chr10:70,213,710...70,673,080
Ensembl chr10:70,214,098...70,673,080 		JBrowse link
G Ccl27 C-C motif chemokine ligand 27 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(MGI:5515359|PMID:12133963)		 RGD PMID:12133963 PMID:21873635 MGI:5515359, RGD:13792537 NCBI chr 5:56,941,402...56,948,511
Ensembl chr 5:56,941,402...56,948,506 		JBrowse link
G Cdc42 cell division cycle 42 involved_in ISO (PMID:26051942) RGD PMID:26051942 NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111 		JBrowse link
G Csf3 colony stimulating factor 3 involved_in ISO (PMID:23001182) RGD PMID:23001182 NCBI chr10:83,660,787...83,664,569
Ensembl chr10:83,661,207...83,663,603 		JBrowse link
G Daam2 dishevelled associated activator of morphogenesis 2 involved_in ISO (PMID:24223803) RGD PMID:24223803 NCBI chr 9:11,428,913...11,546,982
Ensembl chr 9:11,428,724...11,545,497 		JBrowse link
G Fes FES proto-oncogene, tyrosine kinase involved_in ISO (PMID:15302586) RGD PMID:15302586 NCBI chr 1:134,337,698...134,346,934
Ensembl chr 1:134,337,698...134,346,934 		JBrowse link
G Hax1 HCLS1 associated protein X-1 involved_in ISO (PMID:23001182) RGD PMID:23001182 NCBI chr 2:175,434,242...175,437,926
Ensembl chr 2:175,434,238...175,437,714 		JBrowse link
G Hck HCK proto-oncogene, Src family tyrosine kinase involved_in ISS
ISO		 GO_REF:0000024
(PMID:11904303), (PMID:15998323)		 UniProt
RGD		 PMID:11904303 PMID:15998323 GO_REF:0000024 NCBI chr 3:141,571,587...141,614,696
Ensembl chr 3:141,571,587...141,614,693 		JBrowse link
G Hras HRas proto-oncogene, GTPase involved_in ISO (PMID:23027131) RGD PMID:23027131 NCBI chr 1:196,290,127...196,299,823
Ensembl chr 1:196,296,263...196,300,615 		JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (PMID:24863063), (PMID:26051942) RGD PMID:24863063 PMID:26051942 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633 		JBrowse link
G Ntf3 neurotrophin 3 involved_in IEA
ISO		 GO_REF:0000107
(PMID:23027130)		 Ensembl
RGD		 PMID:23027130 GO_REF:0000107 NCBI chr 4:158,914,984...158,984,453
Ensembl chr 4:158,914,957...158,984,596 		JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 involved_in ISO (PMID:23027130) RGD PMID:23027130 NCBI chr 1:132,116,472...132,503,849
Ensembl chr 1:132,132,849...132,503,286 		JBrowse link
G Stap1 signal transducing adaptor family member 1 involved_in ISO (MGI:3831067|PMID:19100238) RGD PMID:19100238 MGI:3831067 NCBI chr14:21,950,466...21,981,395
Ensembl chr14:21,952,496...21,981,245 		JBrowse link
G Tek TEK receptor tyrosine kinase involved_in ISO (PMID:12816861) RGD PMID:12816861 NCBI chr 5:109,607,077...109,733,805
Ensembl chr 5:109,607,077...109,733,804 		JBrowse link
regulation of actin cytoskeleton reorganization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi3bp ABI family member 3 binding protein involved_in IMP PMID:22485184 ARUK-UCL PMID:22485184 RGD:42721990 NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929 		JBrowse link
G Arhgdia Rho GDP dissociation inhibitor alpha involved_in ISO (PMID:8262133) RGD PMID:8262133 NCBI chr10:105,854,526...105,858,020
Ensembl chr10:105,854,533...105,858,023 		JBrowse link
G Arhgdib Rho GDP dissociation inhibitor beta involved_in ISO (PMID:8262133) RGD PMID:8262133 NCBI chr 4:169,822,951...169,841,884
Ensembl chr 4:169,822,952...169,841,658 		JBrowse link
G Carmil1 capping protein regulator and myosin 1 linker 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:40,807,921...41,088,326
Ensembl chr17:40,808,389...41,088,326 		JBrowse link
G Carmil2 capping protein regulator and myosin 1 linker 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:33,571,255...33,586,783
Ensembl chr19:33,574,257...33,586,965 		JBrowse link
G Carmil3 capping protein regulator and myosin 1 linker 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:28,978,440...28,995,865
Ensembl chr15:28,979,007...28,996,225 		JBrowse link
G Cd2ap CD2-associated protein acts_upstream_of_or_within ISO MGI:98725 (MGI:5297732|PMID:21911934) RGD PMID:21911934 MGI:5297732 NCBI chr 9:18,086,744...18,182,744
Ensembl chr 9:18,086,984...18,182,199 		JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(MGI:5294513|PMID:21610095)		 Ensembl
UniProt
RGD		 PMID:21610095 GO_REF:0000024 GO_REF:0000107 MGI:5294513 NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415 		JBrowse link
G Ctsl cathepsin L acts_upstream_of_or_within ISO MGI:1330281|MGI:98725 (MGI:5297732|PMID:21911934) RGD PMID:21911934 MGI:5297732 NCBI chr17:764,370...770,533
Ensembl chr17:764,309...770,548 		JBrowse link
G Dapk3 death-associated protein kinase 3 involved_in ISO (PMID:23454120) RGD PMID:23454120 NCBI chr 7:8,524,182...8,532,552
Ensembl chr 7:8,524,183...8,532,558 		JBrowse link
G Esam endothelial cell adhesion molecule involved_in ISO (PMID:20298433) RGD PMID:20298433 NCBI chr 8:37,238,228...37,249,217
Ensembl chr 8:37,238,287...37,249,215 		JBrowse link
G F11r F11 receptor involved_in ISO (PMID:23885123) RGD PMID:23885123 NCBI chr13:83,873,797...83,897,388
Ensembl chr13:83,873,797...83,897,402 		JBrowse link
G Iqgap2 IQ motif containing GTPase activating protein 2 involved_in ISO (PMID:12515716) RGD PMID:12515716 NCBI chr 2:26,894,836...27,170,270
Ensembl chr 2:26,894,825...27,170,279 		JBrowse link
G Mdk midkine involved_in ISO
ISS		 (PMID:18469519)
GO_REF:0000024		 RGD
UniProt		 PMID:18469519 GO_REF:0000024 NCBI chr 3:77,901,156...77,903,997
Ensembl chr 3:77,901,158...77,903,130 		JBrowse link
G Notch2 notch receptor 2 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:18469519)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:18469519 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088 		JBrowse link
G Phpt1 phosphohistidine phosphatase 1 involved_in ISO (PMID:19344975) RGD PMID:19344975 NCBI chr 3:8,392,926...8,394,325 JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in ISS
ISO		 GO_REF:0000024
(MGI:3583523|PMID:12960403), (MGI:3810237|PMID:17698736)		 UniProt
RGD		 PMID:12960403 PMID:17698736 GO_REF:0000024 MGI:3583523 MGI:3810237 NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282 		JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21840392)		 UniProt
RGD		 PMID:21840392 GO_REF:0000024 NCBI chr 7:128,875,772...128,898,203
Ensembl chr 7:128,875,773...128,898,521 		JBrowse link
G Rhod ras homolog family member D involved_in ISO (MGI:5512821|PMID:23454120) RGD PMID:23454120 MGI:5512821 NCBI chr 1:201,708,699...201,724,405
Ensembl chr 1:201,708,699...201,722,632 		JBrowse link
G Sema3e semaphorin 3E involved_in ISO (MGI:4819325|PMID:20385769) RGD PMID:20385769 MGI:4819325 NCBI chr 4:20,297,534...20,555,287
Ensembl chr 4:20,299,718...20,555,229 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within ISO MGI:1330281 (MGI:5297732|PMID:21911934) RGD PMID:21911934 MGI:5297732 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
G Trpm2 transient receptor potential cation channel, subfamily M, member 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:27068538)		 UniProt
RGD		 PMID:27068538 GO_REF:0000024 NCBI chr20:10,703,568...10,753,189
Ensembl chr20:10,707,014...10,753,181 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19903
    cellular process 18297
      actin filament-based process 852
        actin cytoskeleton organization 764
          actin cytoskeleton reorganization 117
            actin filament reorganization + 10
            negative regulation of actin cytoskeleton reorganization 1
            positive regulation of actin cytoskeleton reorganization 18
            regulation of actin cytoskeleton reorganization + 41
Path 2
Term Annotations click to browse term
  biological_process 19903
    cellular process 18297
      cellular component organization or biogenesis 6768
        cellular component organization 6522
          organelle organization 3653
            cytoskeleton organization 1524
              actin cytoskeleton organization 764
                actin cytoskeleton reorganization 117
                  actin filament reorganization + 10
                  negative regulation of actin cytoskeleton reorganization 1
                  positive regulation of actin cytoskeleton reorganization 18
                  regulation of actin cytoskeleton reorganization + 41
paths to the root