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ONTOLOGY REPORT - ANNOTATIONS


Term:subtelomeric heterochromatin assembly
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Accession:GO:0031509 term browser browse the term
Definition:The assembly of chromatin into heterochromatin at the subtelomeric region, resulting in a chromatin conformation refractory to transcription.
Synonyms:exact_synonym: Telomere Position Effect;   chromatin silencing at telomere;   heterochromatic silencing at telomere;   subtelomeric silencing;   telomere chromatin silencing;   telomeric silencing
 related_synonym: chromatin silencing at subtelomere;   establishment of chromatin silencing at telomere;   heterochromatic silencing at subtelomere;   regulation of chromatin silencing at telomere;   regulation of subtelomeric heterochromatin assembly;   subtelomere chromatin silencing;   telomeric heterochromatin assembly;   telomeric heterochromatin formation
 alt_id: GO:0006348;   GO:0035390;   GO:0099114



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subtelomeric heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DYDC1 DPY30 domain containing 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:29,490,171...29,505,096
Ensembl chr 4:29,466,810...29,501,363
JBrowse link
G EZH1 enhancer of zeste 1 polycomb repressive complex 2 subunit involved_in ISO (MGI:892875|PMID:9214638) ARUK-UCL PMID:9214638 MGI:892875 NCBI chr 9:20,271,729...20,292,918
Ensembl chr 9:20,264,552...20,290,712
JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:1,926,443...1,991,995
Ensembl chr16:1,925,956...1,991,838
JBrowse link
G H3-3A H3.3 histone A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5694896|PMID:26159997) Ensembl
MGI
PMID:26159997 GO_REF:0000107 MGI:5694896 NCBI chr 7:38,797,168...38,805,417
Ensembl chr 7:38,797,448...38,805,416
JBrowse link
G H3-3B H3.3 histone B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:4,805,655...4,808,076
Ensembl chr 9:4,805,650...4,833,503
JBrowse link
G RIF1 replication timing regulatory factor 1 involved_in ISO (MGI:5584328|PMID:24735877) BHF-UCL PMID:24735877 MGI:5584328 NCBI chr19:52,661,278...52,711,969
Ensembl chr19:52,661,155...52,709,279
JBrowse link
G SIRT6 sirtuin 6 involved_in ISO (PMID:21847107) BHF-UCL PMID:21847107 NCBI chr20:55,412,989...55,424,944
Ensembl chr20:55,412,646...55,424,944
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 13972
    cellular process 13229
      cellular component organization or biogenesis 5515
        cellular component organization 5380
          organelle organization 3264
            chromosome organization 780
              telomere organization 139
                subtelomeric heterochromatin assembly 7
Path 2
Term Annotations click to browse term
  biological_process 13972
    cellular process 13229
      cellular component organization or biogenesis 5515
        cellular component organization 5380
          organelle organization 3264
            chromosome organization 780
              DNA conformation change 247
                DNA packaging 186
                  chromatin assembly 148
                    heterochromatin assembly 77
                      constitutive heterochromatin assembly 11
                        subtelomeric heterochromatin assembly 7
paths to the root