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ONTOLOGY REPORT - ANNOTATIONS


Term:subtelomeric heterochromatin assembly
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Accession:GO:0031509 term browser browse the term
Definition:The assembly of chromatin into heterochromatin at the subtelomeric region, resulting in a chromatin conformation refractory to transcription.
Synonyms:exact_synonym: Telomere Position Effect;   chromatin silencing at telomere;   heterochromatic silencing at telomere;   subtelomeric silencing;   telomere chromatin silencing;   telomeric silencing
 related_synonym: chromatin silencing at subtelomere;   establishment of chromatin silencing at telomere;   heterochromatic silencing at subtelomere;   regulation of chromatin silencing at telomere;   regulation of subtelomeric heterochromatin assembly;   subtelomere chromatin silencing;   telomeric heterochromatin assembly;   telomeric heterochromatin formation
 alt_id: GO:0006348;   GO:0035390;   GO:0099114



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subtelomeric heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dot1l DOT1 like histone lysine methyltransferase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:8,917,786...8,959,474
Ensembl chr 7:8,917,786...8,956,475
JBrowse link
G Dpy30 dpy-30 histone methyltransferase complex regulatory subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:21,120,947...21,141,720
Ensembl chr 6:21,120,947...21,141,432
JBrowse link
G Dydc1 DPY30 domain containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:16,940,946...16,961,462
Ensembl chr16:16,939,227...16,961,460
JBrowse link
G Dydc2 DPY30 domain containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:16,928,172...16,941,950
Ensembl chr16:16,928,194...16,936,164
JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit involved_in ISO UniProtKB:P38827 (MGI:892875|PMID:9214638) RGD PMID:9214638 MGI:892875 NCBI chr10:86,126,023...86,162,001
Ensembl chr10:86,126,015...86,161,921
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO UniProtKB:P38827 (PMID:9214638) RGD PMID:9214638 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G H3f3a H3.3 histone A acts_upstream_of_or_within ISO MGI:1101768 (MGI:5694896|PMID:26159997) RGD PMID:26159997 MGI:5694896 NCBI chr13:92,533,294...92,544,903
Ensembl chr13:92,533,298...92,544,908
JBrowse link
G H3f3b H3.3 histone B acts_upstream_of_or_within ISO MGI:1097686 (MGI:5694896|PMID:26159997) RGD PMID:26159997 MGI:5694896 NCBI chr10:101,256,488...101,258,712
Ensembl chr10:101,256,480...101,258,709
JBrowse link
G Hat1 histone acetyltransferase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:56,217,344...56,265,021
Ensembl chr 3:56,217,342...56,275,517
JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in ISO (MGI:5584328|PMID:24735877) RGD PMID:24735877 MGI:5584328 NCBI chr 3:36,554,689...36,607,961
Ensembl chr 3:36,554,697...36,603,617
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19390
    metabolic process 11736
      negative regulation of metabolic process 3183
        negative regulation of macromolecule metabolic process 2956
          negative regulation of gene expression 1123
            gene silencing 266
              heterochromatin assembly 99
                subtelomeric heterochromatin assembly 10
Path 2
Term Annotations click to browse term
  biological_process 19390
    cellular process 18252
      cellular component organization or biogenesis 6492
        cellular component organization 6250
          organelle organization 3788
            chromosome organization 900
              chromatin organization 464
                regulation of gene expression, epigenetic 164
                  negative regulation of gene expression, epigenetic 105
                    heterochromatin assembly 99
                      subtelomeric heterochromatin assembly 10
paths to the root