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ONTOLOGY REPORT - ANNOTATIONS


Term:chromatin disassembly
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Accession:GO:0031498 term browser browse the term
Definition:The controlled breakdown of chromatin from a higher order structure into its simpler subcomponents, DNA, histones, other proteins, and sometimes RNA.


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nucleosome disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid1a AT-rich interaction domain 1A involved_in ISO (PMID:8895581) RGD PMID:8895581 NCBI chr 5:151,904,687...151,977,973
Ensembl chr 5:151,904,684...151,977,636
JBrowse link
G Arid2 AT-rich interaction domain 2 involved_in ISO (PMID:8895581) RGD PMID:8895581 NCBI chr 7:137,680,564...137,798,329
Ensembl chr 7:137,680,530...137,795,655
JBrowse link
G Grwd1 glutamate-rich WD repeat containing 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:27552915)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:27552915 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:101,813,356...101,819,058
Ensembl chr 1:101,813,684...101,819,478
JBrowse link
G H2bc1 H2B clustered histone 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5502464|PMID:23884607)
UniProt
RGD
PMID:23884607 GO_REF:0000024 MGI:5502464 NCBI chr17:43,423,111...43,423,580
Ensembl chr17:43,423,111...43,423,580
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 involved_in IDA
IEA
ISO
GO_REF:0000107
(PMID:8895581)
Ensembl
RGD
PMID:8895581, PMID:9001244 GO_REF:0000107, RGD:634124 NCBI chr 8:22,648,323...22,739,468
Ensembl chr 8:22,648,323...22,739,468
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 involved_in ISO (PMID:8895581) RGD PMID:8895581 NCBI chr20:13,679,955...13,702,821
Ensembl chr20:13,680,716...13,704,931
JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 involved_in ISO (PMID:8895581) RGD PMID:8895581 NCBI chr 8:118,206,678...118,326,264
Ensembl chr 8:118,206,698...118,325,537
JBrowse link
G Smarcc2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 involved_in ISO (PMID:8895581) RGD PMID:8895581 NCBI chr 7:2,875,898...2,905,463
Ensembl chr 7:2,875,909...2,904,453
JBrowse link
G Smarcd1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 involved_in ISO
IBA
(PMID:8895581)
PMID:21873635
RGD PMID:8895581, PMID:21873635 RGD:13792537 NCBI chr 7:141,355,623...141,366,725
Ensembl chr 7:141,355,994...141,366,732
JBrowse link
G Smarcd2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 involved_in ISO
IBA
(PMID:8895581)
PMID:21873635
RGD PMID:8895581, PMID:21873635 RGD:13792537 NCBI chr10:94,451,866...94,460,732
Ensembl chr10:94,451,866...94,460,732
JBrowse link
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 involved_in IBA
ISO
PMID:21873635
(PMID:8895581)
RGD PMID:8895581, PMID:21873635 RGD:13792537 NCBI chr 4:7,076,710...7,108,334
Ensembl chr 4:7,076,759...7,108,328
JBrowse link
G Smarce1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 involved_in ISO (PMID:8895581) RGD PMID:8895581 NCBI chr10:87,116,827...87,138,890
Ensembl chr10:87,116,827...87,137,965
JBrowse link
G Tnp1 transition protein 1 involved_in ISO
ISS
(PMID:10781074)
GO_REF:0000024
RGD
UniProt
PMID:10781074 GO_REF:0000024 NCBI chr 9:80,294,837...80,295,446
Ensembl chr 9:80,294,840...80,295,446
JBrowse link
regulation of chromatin disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map1s microtubule-associated protein 1S involved_in IEA
ISO
GO_REF:0000107
(PMID:12762840)
Ensembl
RGD
PMID:12762840 GO_REF:0000107 NCBI chr16:20,268,663...20,278,850
Ensembl chr16:20,267,581...20,278,814
JBrowse link
G Padi2 peptidyl arginine deiminase 2 involved_in ISO
IEA
(PMID:22853951)
GO_REF:0000107
RGD
Ensembl
PMID:22853951 GO_REF:0000107 NCBI chr 5:159,428,479...159,471,113
Ensembl chr 5:159,428,515...159,471,144
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19612
    cellular process 18457
      cellular component organization or biogenesis 6724
        cellular component organization 6479
          cellular component disassembly 433
            chromatin disassembly 15
              nucleosome disassembly + 13
              regulation of chromatin disassembly 2
Path 2
Term Annotations click to browse term
  biological_process 19612
    cellular process 18457
      cellular component organization or biogenesis 6724
        cellular component organization 6479
          organelle organization 4057
            chromosome organization 1223
              chromatin organization 808
                chromatin assembly or disassembly 184
                  chromatin disassembly 15
                    nucleosome disassembly + 13
                    regulation of chromatin disassembly 2
paths to the root